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LacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00132
Bact-VirLacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00132
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-104
D2
high
residues 108-281
Domain cluster:
rep: EU409559.1__ACB72572.1__X__00032__D76-201_219-245
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3f5rA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 29.0 | 3.54e-01 | 77.0% | 82.3% |
| 1bebA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 37.0 | 3.90e-01 | 89.7% | 82.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3884681 | 292.2.1.10 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › C5orf34-like_N | 0.63 | 29.0 | 3.81e-01 | 74.7% | 77.9% |
| 5014253 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.55 | 22.0 | 3.44e-01 | 75.3% | 92.9% |
| 3596847 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 28.0 | 3.48e-01 | 79.9% | 81.9% |
| 3719596 | 77.1.1.3 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › MORN_DRC7 | 0.52 | 41.0 | 4.18e-01 | 82.2% | 90.0% |
| 3583241 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 31.0 | 3.84e-01 | 77.0% | 96.2% |
| 3685702 | 3484.1.1.2 ↗ | a+b two layers › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Glyco_hydro_64 | 0.51 | 36.0 | 3.52e-01 | 89.1% | 64.1% |