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LacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00147
Bact-VirLacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00147
Identity
- Kingdom:
- phage
Quality
76.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-140
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5bviA00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.59 | 45.0 | 4.13e-01 | 80.0% | 94.0% |
| 1ewqA04 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.55 | 34.0 | 3.49e-01 | 71.4% | 64.0% |
| 2bv4A00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.52 | 37.0 | 4.08e-01 | 72.1% | 90.3% |
| 4r9pA00 | 2.60.200.10 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.52 | 37.0 | 3.27e-01 | 72.9% | 85.2% |
| 2wraA00 | 2.60.120.400 | Mainly Beta › Sandwich › Jelly Rolls › Calcium-mediated lectin | 0.52 | 36.0 | 3.89e-01 | 72.1% | 88.5% |
| 3a2pA00 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.50 | 40.0 | 2.81e-01 | 86.4% | 78.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3408201 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.58 | 42.0 | 3.67e-01 | 75.0% | 82.8% |
| 3409563 | 73.1.1.3 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › MH2 | 0.55 | 44.0 | 3.89e-01 | 87.1% | 88.3% |
| 4448678 | 4.1.1.307 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26132 | 0.54 | 29.0 | 3.96e-01 | 71.4% | 100.0% |