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LacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00160
Bact-VirLacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00160
Identity
- Kingdom:
- phage
Quality
74.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-78
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00550.32 best | PP-binding | 21.3 | 3.60e-04 | 88.2% | 74.6% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2cgqA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.86 | 78.0 | 7.96e-01 | 96.1% | 100.0% |
| 7e42A01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.85 | 76.0 | 7.74e-01 | 94.7% | 100.0% |
| 2l4bA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.85 | 76.0 | 7.21e-01 | 96.1% | 89.8% |
| 1vkuA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.84 | 79.0 | 7.58e-01 | 100.0% | 91.8% |
| 2n50A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.84 | 74.0 | 7.34e-01 | 94.7% | 96.2% |
| 3ce7A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.83 | 78.0 | 7.32e-01 | 100.0% | 92.2% |
| 8cuyA01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.83 | 71.0 | 7.18e-01 | 92.1% | 97.3% |
| 2liuA01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.82 | 76.0 | 7.29e-01 | 100.0% | 91.8% |
| 4h2uD00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.82 | 72.0 | 7.17e-01 | 93.4% | 97.4% |
| 3lmoA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.82 | 75.0 | 6.94e-01 | 100.0% | 95.7% |
| 5mswA01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.82 | 70.0 | 6.57e-01 | 92.1% | 79.3% |
| 2n5hA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.81 | 73.0 | 6.88e-01 | 100.0% | 94.4% |
| 1dv5A00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.80 | 70.0 | 6.88e-01 | 94.7% | 97.5% |
| 5gxvA02 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.80 | 72.0 | 6.66e-01 | 98.7% | 84.4% |
| 2l22A01 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.80 | 73.0 | 6.90e-01 | 100.0% | 83.5% |
| 2afdA00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.79 | 69.0 | 6.57e-01 | 96.1% | 85.2% |
| 2p9xA00 | 1.10.1200.200 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Protein of unknown function DUF3227 | 0.67 | 57.0 | 5.30e-01 | 96.1% | 96.9% |
| 1n0uA03 | 3.90.1430.10 | Alpha Beta › Alpha-Beta Complex › Yeast translation eEF2 (G' domain) › Yeast translation eEF2 (G' domain) | 0.66 | 41.0 | 3.65e-01 | 96.1% | 43.9% |
| 2eucA00 | 1.10.8.570 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Hypothetical protein YfmB | 0.64 | 49.0 | 4.39e-01 | 82.9% | 98.1% |
| 1bc0A03 | 1.10.220.10 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin | 0.53 | 36.0 | 3.48e-01 | 84.2% | 62.8% |
| 1ofcX04 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 36.0 | 3.44e-01 | 85.5% | 58.5% |
| 3r72A00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.52 | 41.0 | 3.64e-01 | 90.8% | 91.0% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.51 | 43.0 | 3.57e-01 | 100.0% | 69.3% |
| 5bykA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 44.0 | 3.11e-01 | 100.0% | 29.5% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3374908 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.88 | 79.0 | 7.81e-01 | 96.1% | 95.0% |
| 3828199 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.87 | 82.0 | 7.83e-01 | 100.0% | 92.9% |
| 4073207 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.85 | 75.0 | 7.20e-01 | 93.4% | 100.0% |
| 2634666 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.85 | 77.0 | 7.67e-01 | 97.4% | 97.5% |
| 4288606 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.84 | 76.0 | 7.15e-01 | 97.4% | 85.6% |
| 3288011 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.84 | 77.0 | 7.54e-01 | 97.4% | 98.8% |
| 4081277 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.84 | 76.0 | 7.29e-01 | 97.4% | 89.4% |
| 4449631 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.83 | 75.0 | 7.36e-01 | 96.1% | 98.8% |
| 3286232 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.83 | 77.0 | 7.23e-01 | 100.0% | 86.7% |
| 3287624 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.83 | 73.0 | 7.19e-01 | 94.7% | 92.5% |
| 4400359 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.83 | 76.0 | 7.49e-01 | 98.7% | 100.0% |
| 3635605 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.82 | 75.0 | 7.08e-01 | 98.7% | 87.8% |
| 4162997 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.82 | 76.0 | 6.74e-01 | 100.0% | 75.2% |
| 2885115 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.82 | 74.0 | 7.27e-01 | 98.7% | 97.6% |
| 4183969 | 132.1.1.6 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › DUF7080 | 0.82 | 71.0 | 6.29e-01 | 93.4% | 70.5% |
| 4248050 | 132.1.1.6 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › DUF7080 | 0.81 | 74.0 | 6.62e-01 | 100.0% | 75.2% |
| 3183446 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.81 | 72.0 | 6.65e-01 | 97.4% | 76.8% |
| 4276538 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.81 | 74.0 | 6.62e-01 | 100.0% | 75.2% |
| 4016944 | 132.1.1.6 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › DUF7080 | 0.81 | 74.0 | 6.79e-01 | 98.7% | 81.1% |
| 4217720 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.81 | 74.0 | 6.97e-01 | 100.0% | 86.7% |
| 4644825 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.80 | 69.0 | 6.95e-01 | 93.4% | 100.0% |
| 4366703 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.80 | 69.0 | 6.54e-01 | 93.4% | 81.1% |
| 3732541 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.80 | 73.0 | 6.89e-01 | 100.0% | 87.8% |
| 4010953 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.80 | 72.0 | 6.43e-01 | 98.7% | 73.3% |
| 3339928 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.80 | 72.0 | 6.60e-01 | 100.0% | 81.0% |
| 3686466 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.80 | 73.0 | 6.37e-01 | 100.0% | 70.9% |
| 4349513 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.80 | 71.0 | 6.44e-01 | 97.4% | 76.0% |
| 3961382 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.80 | 70.0 | 6.92e-01 | 96.1% | 97.5% |
| 4390080 | 132.1.1.6 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › DUF7080 | 0.80 | 73.0 | 6.20e-01 | 100.0% | 66.7% |
| 3206582 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.79 | 71.0 | 6.38e-01 | 100.0% | 74.3% |
| 4180629 | 132.1.1.6 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › DUF7080 | 0.79 | 72.0 | 6.43e-01 | 100.0% | 74.3% |
| 4012871 | 132.1.1.0 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) | 0.79 | 71.0 | 6.26e-01 | 100.0% | 70.9% |
| 4541154 | 132.1.1.6 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › DUF7080 | 0.78 | 71.0 | 6.39e-01 | 100.0% | 75.0% |
| 3290586 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.78 | 69.0 | 6.82e-01 | 97.4% | 96.2% |
| 4367389 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.78 | 69.0 | 6.44e-01 | 98.7% | 82.1% |
| 3288850 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.77 | 69.0 | 6.31e-01 | 100.0% | 77.0% |
| 3281143 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.74 | 64.0 | 6.38e-01 | 96.1% | 92.5% |
| 3023231 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.73 | 65.0 | 6.37e-01 | 100.0% | 90.4% |
| 3960384 | 132.1.1.0 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) | 0.73 | 65.0 | 4.92e-01 | 100.0% | 42.2% |
| 3277050 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.71 | 61.0 | 5.91e-01 | 96.1% | 84.7% |
| 3918999 | 2004.1.1.414 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU, MMR_HSR1 | 0.60 | 42.0 | 2.74e-01 | 100.0% | 15.6% |
| 3931915 | 309.1.1.11 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › PqqF-like_C_4 | 0.58 | 50.0 | 3.53e-01 | 94.7% | 81.7% |
| 3701400 | 529.1.1.0 ↗ | few secondary structure elements › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) › Anaphylotoxins (complement system) | 0.53 | 38.0 | 3.90e-01 | 94.7% | 84.3% |
| 3340550 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.53 | 36.0 | 3.65e-01 | 84.2% | 72.0% |
| 3931795 | 176.1.1.1 ↗ | alpha arrays › Annexin › Annexin › Annexin › Annexin | 0.51 | 37.0 | 3.85e-01 | 75.0% | 94.3% |