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LacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00189
Bact-VirLacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00189
Identity
- Kingdom:
- phage
Quality
70.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 58-151_190-212
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l9tA02 | 1.25.40.290 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat domains | 0.65 | 50.0 | 5.05e-01 | 80.3% | 91.5% |
| 3ea5D00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.58 | 53.0 | 3.15e-01 | 100.0% | 24.7% |
| 3g7rA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.58 | 41.0 | 3.54e-01 | 73.5% | 97.4% |
| 4g3aB00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 53.0 | 4.15e-01 | 100.0% | 83.3% |
| 3dadA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.57 | 51.0 | 3.71e-01 | 98.3% | 54.0% |
| 1bk6A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 50.0 | 3.38e-01 | 96.6% | 35.1% |
| 3l6xA01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 50.0 | 3.45e-01 | 100.0% | 46.8% |
| 4d49A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.56 | 50.0 | 3.97e-01 | 99.1% | 76.9% |
| 7dvqK01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 50.0 | 4.41e-01 | 100.0% | 98.8% |
| 1xm9A01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 50.0 | 3.44e-01 | 100.0% | 42.7% |
| 2qk2A01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 50.0 | 3.98e-01 | 100.0% | 78.2% |
| 3sl9B00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.55 | 49.0 | 4.36e-01 | 98.3% | 90.3% |
| 1pxyB03 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.54 | 36.0 | 3.62e-01 | 78.6% | 66.1% |
| 4y5jA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.54 | 50.0 | 3.95e-01 | 99.1% | 77.1% |
| 5mdtA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 47.0 | 4.34e-01 | 97.4% | 92.1% |
| 6tblB01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.53 | 44.0 | 4.53e-01 | 94.9% | 95.5% |
| 2of3A00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.52 | 47.0 | 3.62e-01 | 100.0% | 83.8% |
| 2l1lB00 | 1.20.1440.250 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.51 | 45.0 | 4.40e-01 | 96.6% | 90.6% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3666599 | 109.4.1.1587 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MOR2-PAG1_N, MOR2-PAG1_mid | 0.75 | 57.0 | 3.32e-01 | 80.3% | 11.2% |
| 3722303 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.69 | 53.0 | 4.05e-01 | 80.3% | 50.4% |
| 3808217 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.67 | 51.0 | 5.08e-01 | 80.3% | 89.2% |
| 4025817 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 49.0 | 3.56e-01 | 82.1% | 57.8% |
| 3467075 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.61 | 57.0 | 3.43e-01 | 99.1% | 32.7% |
| 4019412 | 109.4.1.1974 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Gcn1_N, GNC1_N | 0.61 | 53.0 | 3.69e-01 | 96.6% | 48.0% |
| 3727421 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.60 | 43.0 | 3.89e-01 | 74.4% | 94.4% |
| 4927555 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.59 | 52.0 | 3.86e-01 | 94.9% | 44.2% |
| 3365651 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.59 | 55.0 | 3.73e-01 | 99.1% | 59.0% |
| 3373578 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.58 | 52.0 | 4.48e-01 | 96.6% | 88.3% |
| 3502309 | 109.4.1.163 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SYMPK_PTA1_N | 0.58 | 51.0 | 3.70e-01 | 94.9% | 57.8% |
| 4198477 | 3758.2.1.1 ↗ | alpha bundles › Bacterial hemolysins-like › Biopolymer transport protein ExbB › Biopolymer transport protein ExbB › MotA_ExbB | 0.58 | 39.0 | 3.09e-01 | 77.8% | 35.1% |
| 5072479 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.58 | 52.0 | 3.23e-01 | 96.6% | 20.0% |
| 4027161 | 109.4.1.1602 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N, TPR_IMB1 | 0.56 | 51.0 | 3.20e-01 | 97.4% | 28.2% |
| 3201888 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 50.0 | 3.99e-01 | 100.0% | 77.9% |
| 3650518 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 51.0 | 3.93e-01 | 100.0% | 78.7% |
| 3287767 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 50.0 | 4.79e-01 | 96.6% | 98.5% |
| 3575496 | 109.4.1.957 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TTI1_N | 0.55 | 50.0 | 3.18e-01 | 100.0% | 44.1% |
| 4945178 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.55 | 48.0 | 4.53e-01 | 96.6% | 84.7% |
| 3605292 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 49.0 | 3.45e-01 | 99.1% | 58.1% |
| 4458261 | 109.4.1.3341 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UNC45-central, TPR_8 | 0.54 | 49.0 | 3.24e-01 | 100.0% | 43.5% |
| 3563529 | 109.4.1.1145 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IQ | 0.53 | 47.0 | 3.51e-01 | 98.3% | 62.9% |
| 3599978 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 47.0 | 3.52e-01 | 97.4% | 90.0% |
| 3921851 | 109.4.1.1223 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DOP1B | 0.53 | 44.0 | 3.65e-01 | 88.9% | 61.5% |
| 3532347 | 109.4.1.209 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Katanin_con80 | 0.52 | 46.0 | 4.12e-01 | 99.1% | 84.6% |
| 4336655 | 109.3.1.165 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4, Ank_5 | 0.50 | 45.0 | 3.07e-01 | 100.0% | 40.7% |