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LacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00246
Bact-VirLacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00246
Identity
- Kingdom:
- phage
Quality
77.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 50-115
Domain cluster:
representative
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5vhgA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.81 | 75.0 | 5.64e-01 | 100.0% | 63.3% |
| 1cfeA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.74 | 66.0 | 5.21e-01 | 100.0% | 67.4% |
| 1vq8S00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.69 | 52.0 | 4.87e-01 | 80.3% | 74.1% |
| 7dl8C01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.69 | 47.0 | 4.23e-01 | 71.2% | 56.2% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.68 | 52.0 | 3.80e-01 | 80.3% | 67.1% |
| 7r3eB02 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.68 | 50.0 | 3.75e-01 | 78.8% | 68.1% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.68 | 52.0 | 4.83e-01 | 81.8% | 74.4% |
| 6cc0A01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.66 | 50.0 | 3.71e-01 | 80.3% | 69.5% |
| 5l09B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.66 | 51.0 | 3.78e-01 | 81.8% | 71.3% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 48.0 | 4.09e-01 | 80.3% | 56.9% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 43.0 | 4.03e-01 | 71.2% | 56.1% |
| 2p0lA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.64 | 53.0 | 3.63e-01 | 97.0% | 56.8% |
| 2n3lA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.64 | 43.0 | 3.94e-01 | 71.2% | 55.1% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 48.0 | 4.23e-01 | 81.8% | 63.0% |
| 1dr9A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 47.0 | 4.17e-01 | 80.3% | 63.2% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 46.0 | 4.13e-01 | 78.8% | 89.2% |
| 3irpX02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 47.0 | 3.60e-01 | 80.3% | 66.9% |
| 6a2bB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 47.0 | 4.17e-01 | 81.8% | 67.0% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 45.0 | 4.36e-01 | 97.0% | 71.6% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 45.0 | 3.81e-01 | 80.3% | 66.1% |
| 2e1bA02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.59 | 44.0 | 3.64e-01 | 81.8% | 73.6% |
| 3v97A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 47.0 | 3.48e-01 | 86.4% | 93.5% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 45.0 | 4.14e-01 | 81.8% | 73.3% |
| 2pd1A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 40.0 | 3.54e-01 | 71.2% | 58.9% |
| 2zfdB00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.58 | 47.0 | 3.92e-01 | 87.9% | 79.3% |
| 3dmgA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 45.0 | 3.37e-01 | 84.8% | 79.1% |
| 2h00B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 46.0 | 3.28e-01 | 87.9% | 82.4% |
| 2vzyC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 42.0 | 3.08e-01 | 78.8% | 48.1% |
| 2m9kA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 39.0 | 3.55e-01 | 71.2% | 51.6% |
| 6i6lA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 47.0 | 3.21e-01 | 90.9% | 69.2% |
| 3b5iB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 44.0 | 3.06e-01 | 86.4% | 98.4% |
| 4pbdA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 42.0 | 3.73e-01 | 81.8% | 70.6% |
| 2qyoA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 45.0 | 3.08e-01 | 89.4% | 69.9% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 38.0 | 3.73e-01 | 71.2% | 66.2% |
| 3fvcA03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.55 | 40.0 | 3.39e-01 | 75.8% | 93.6% |
| 1t02A02 | 3.90.770.10 | Alpha Beta › Alpha-Beta Complex › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 › 3-hydroxy-3-methylglutaryl-coenzyme A Reductase; Chain A, domain 2 | 0.55 | 41.0 | 2.80e-01 | 81.8% | 42.1% |
| 2lxrA00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.54 | 39.0 | 3.81e-01 | 78.8% | 97.4% |
| 1f08B00 | 3.40.1310.10 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.54 | 44.0 | 3.49e-01 | 90.9% | 48.3% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 43.0 | 3.30e-01 | 89.4% | 93.9% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 37.0 | 3.58e-01 | 71.2% | 62.7% |
| 1rhfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.58e-01 | 77.3% | 58.2% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 46.0 | 3.71e-01 | 95.5% | 78.3% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.53 | 46.0 | 3.42e-01 | 97.0% | 75.6% |
| 1dusA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 40.0 | 3.03e-01 | 87.9% | 79.4% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.53 | 37.0 | 3.56e-01 | 77.3% | 64.0% |
| 5nahA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 45.0 | 2.77e-01 | 93.9% | 50.7% |
| 2yd1A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.44e-01 | 81.8% | 58.6% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3495541 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.81 | 75.0 | 5.63e-01 | 100.0% | 64.0% |
| 3478962 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.81 | 74.0 | 5.42e-01 | 100.0% | 58.2% |
| 4031162 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.81 | 74.0 | 5.82e-01 | 100.0% | 70.8% |
| 3405770 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.78 | 71.0 | 5.37e-01 | 100.0% | 60.1% |
| 3398052 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.76 | 70.0 | 5.23e-01 | 100.0% | 59.7% |
| 3224762 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.75 | 51.0 | 4.68e-01 | 71.2% | 56.5% |
| 3776325 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.72 | 51.0 | 3.88e-01 | 74.2% | 36.5% |
| 5009365 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.71 | 48.0 | 4.55e-01 | 71.2% | 60.0% |
| 4977203 | 304.8.1.8 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_4 | 0.69 | 48.0 | 4.35e-01 | 72.7% | 58.9% |
| 3349690 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.69 | 49.0 | 4.00e-01 | 74.2% | 42.5% |
| 3651303 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.68 | 48.0 | 5.00e-01 | 72.7% | 80.0% |
| 3513343 | 304.109.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23,Ribosomal_L23eN | 0.68 | 51.0 | 4.19e-01 | 80.3% | 50.0% |
| 3172922 | 304.9.1.161 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF30126 | 0.68 | 47.0 | 4.19e-01 | 71.2% | 56.7% |
| 4838855 | 304.109.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23,Ribosomal_L23eN | 0.68 | 51.0 | 4.17e-01 | 80.3% | 49.6% |
| 1936503 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.68 | 52.0 | 4.67e-01 | 81.8% | 67.0% |
| 5029835 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.68 | 51.0 | 4.16e-01 | 80.3% | 50.0% |
| 3664564 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.67 | 47.0 | 4.92e-01 | 72.7% | 80.0% |
| 3182321 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.67 | 46.0 | 4.05e-01 | 72.7% | 50.0% |
| 3349076 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.66 | 48.0 | 3.81e-01 | 97.0% | 37.8% |
| 4623039 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.66 | 50.0 | 4.83e-01 | 81.8% | 81.3% |
| 3853561 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.66 | 51.0 | 4.55e-01 | 81.8% | 66.7% |
| 3407044 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.66 | 46.0 | 4.21e-01 | 72.7% | 58.8% |
| 3521768 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.65 | 46.0 | 4.16e-01 | 74.2% | 61.1% |
| 3329478 | 304.8.1.2 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT | 0.65 | 56.0 | 4.67e-01 | 98.5% | 72.5% |
| 3321864 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 55.0 | 4.67e-01 | 95.5% | 72.7% |
| 4024640 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 46.0 | 3.98e-01 | 75.8% | 52.9% |
| 3393046 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.64 | 50.0 | 4.59e-01 | 98.5% | 64.7% |
| 4500983 | 304.8.1.53 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GlnD_5th | 0.63 | 54.0 | 4.17e-01 | 98.5% | 51.2% |
| 3386924 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 54.0 | 4.72e-01 | 98.5% | 68.6% |
| 3563581 | 11.1.1.108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 | 0.63 | 48.0 | 4.08e-01 | 81.8% | 58.1% |
| 3295601 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.62 | 45.0 | 4.17e-01 | 78.8% | 60.0% |
| 3603087 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.62 | 44.0 | 4.14e-01 | 81.8% | 60.0% |
| None | — | 0.62 | 50.0 | 3.40e-01 | 87.9% | 85.5% | |
| 4929587 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.62 | 46.0 | 4.18e-01 | 80.3% | 82.2% |
| 4626950 | 2003.1.5.40 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TrmK | 0.62 | 49.0 | 3.63e-01 | 86.4% | 90.6% |
| 5079433 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.61 | 49.0 | 3.53e-01 | 86.4% | 98.4% |
| 3220778 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.61 | 46.0 | 4.20e-01 | 83.3% | 65.6% |
| 3406524 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.60 | 41.0 | 3.80e-01 | 71.2% | 56.6% |
| 4289347 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.59 | 48.0 | 3.25e-01 | 89.4% | 80.6% |
| 4506358 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 47.0 | 3.97e-01 | 87.9% | 79.1% |
| 5054678 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.59 | 41.0 | 4.00e-01 | 74.2% | 69.3% |
| 5052153 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.59 | 44.0 | 3.70e-01 | 81.8% | 48.7% |
| 3879806 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.58 | 51.0 | 4.63e-01 | 100.0% | 90.0% |
| 4987374 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.58 | 41.0 | 3.96e-01 | 75.8% | 68.0% |
| 4498099 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.57 | 45.0 | 2.99e-01 | 84.8% | 28.6% |
| 3893621 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.57 | 43.0 | 3.51e-01 | 80.3% | 65.0% |
| 5083741 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 42.0 | 3.57e-01 | 80.3% | 65.5% |
| 5022296 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.56 | 42.0 | 3.77e-01 | 81.8% | 57.9% |
| 4963322 | 304.165.1.2 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › BAT | 0.55 | 41.0 | 3.31e-01 | 81.8% | 38.6% |
| 5046352 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 38.0 | 3.23e-01 | 71.2% | 45.7% |
| 3167746 | 304.9.1.71 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › SNU71_RBD | 0.55 | 50.0 | 3.80e-01 | 100.0% | 48.7% |
| 4003644 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.55 | 41.0 | 3.00e-01 | 78.8% | 69.1% |
| 3508173 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.54 | 39.0 | 3.57e-01 | 80.3% | 74.7% |
| 3586226 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.54 | 42.0 | 3.58e-01 | 84.8% | 61.8% |
| 5053714 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.54 | 47.0 | 3.75e-01 | 98.5% | 75.6% |
| 5077094 | 304.126.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C | 0.54 | 43.0 | 3.91e-01 | 98.5% | 64.4% |
| 3546697 | 320.1.1.1 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain › R3H | 0.52 | 35.0 | 3.18e-01 | 71.2% | 48.9% |
| 3887526 | 304.24.1.18 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › TYW2_N | 0.52 | 36.0 | 3.41e-01 | 97.0% | 57.6% |
| 3164278 | 304.8.1.25 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF5609 | 0.51 | 41.0 | 3.78e-01 | 98.5% | 65.6% |
| 4987106 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.51 | 37.0 | 3.37e-01 | 78.8% | 72.6% |
| 3913337 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.50 | 38.0 | 3.35e-01 | 83.3% | 64.8% |