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LacPavin_0818_WC45_scaffold_30120_prodigal-single.1__X__X__00103
Bact-VirLacPavin_0818_WC45_scaffold_30120_prodigal-single.1__X__X__00103
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-60
D2
medium
residues 66-272
Domain cluster:
rep: KM199771.1__AIK68527.1__Lo5R7ANS_57__00057__D358-488_526-544
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n40P04 | 2.60.40.2400 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C | 0.67 | 23.0 | 3.81e-01 | 99.5% | 86.3% |
| 2vecA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 24.0 | 3.52e-01 | 100.0% | 70.9% |
| 2vecA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 25.0 | 3.18e-01 | 100.0% | 63.7% |
| 6m9sD01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 22.0 | 3.13e-01 | 100.0% | 70.3% |
| 4dzgA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 26.0 | 3.42e-01 | 100.0% | 88.5% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928383 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.74 | 24.0 | 3.69e-01 | 100.0% | 67.8% |
| 3708492 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.64 | 25.0 | 3.50e-01 | 100.0% | 70.5% |
| 4929792 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.64 | 23.0 | 3.23e-01 | 100.0% | 65.0% |
| 3342352 | 10.32.1.210 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GOLD_PATL1_C | 0.61 | 25.0 | 3.41e-01 | 100.0% | 71.8% |
| 2410193 | 3794.1.2.0 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase | 0.60 | 24.0 | 3.95e-01 | 100.0% | 100.0% |
| 3508967 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 25.0 | 3.36e-01 | 100.0% | 71.8% |
| 4982154 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 23.0 | 3.21e-01 | 100.0% | 72.0% |
| 3642389 | 10.32.1.4 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L | 0.58 | 22.0 | 3.12e-01 | 100.0% | 68.6% |
| 5045833 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 23.0 | 3.09e-01 | 100.0% | 69.5% |
| 1412423 | 10.32.1.72 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TPPII_GBD | 0.55 | 23.0 | 2.96e-01 | 100.0% | 63.0% |
| 5047633 | 10.1.2.183 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › PPC | 0.55 | 27.0 | 3.79e-01 | 100.0% | 93.3% |
| 5060870 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 22.0 | 3.01e-01 | 100.0% | 69.5% |
| 5046040 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 27.0 | 3.72e-01 | 99.5% | 93.3% |
| 5046609 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 26.0 | 3.68e-01 | 100.0% | 93.3% |
| 4946056 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 26.0 | 3.63e-01 | 99.5% | 92.4% |
| 3503404 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.53 | 22.0 | 3.03e-01 | 100.0% | 72.2% |
| 5053827 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 22.0 | 3.01e-01 | 100.0% | 73.3% |
| 3290668 | 3370.1.1.0 ↗ | beta sandwiches › Lactococcin 972 › Lactococcin 972 › Lactococcin 972 | 0.53 | 23.0 | 3.41e-01 | 99.5% | 100.0% |
| 4955989 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 25.0 | 3.68e-01 | 98.6% | 100.0% |
| 5039150 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 28.0 | 3.77e-01 | 100.0% | 95.7% |
| 4958880 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 26.0 | 3.46e-01 | 96.6% | 96.8% |
| 5053030 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.51 | 22.0 | 3.32e-01 | 100.0% | 98.8% |
| 3928274 | 10.4.1.27 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › PF29839 | 0.50 | 22.0 | 3.01e-01 | 100.0% | 81.0% |