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LacPavin_0818_WC45_scaffold_30120_prodigal-single.1__X__X__00112
Bact-VirLacPavin_0818_WC45_scaffold_30120_prodigal-single.1__X__X__00112
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 578-694
Domain cluster:
rep: IMGVR_UViG_3300026087_000110-3300026087-Ga0208113_10042681__D732-837
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pn5A10 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.63 | 45.0 | 4.18e-01 | 96.6% | 58.9% |
| 6cl5A01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 46.0 | 4.88e-01 | 97.4% | 88.2% |
| 2okmA00 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 48.0 | 4.49e-01 | 94.9% | 66.4% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.61 | 45.0 | 4.22e-01 | 96.6% | 63.8% |
| 1v70A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 39.0 | 4.17e-01 | 92.3% | 77.1% |
| 2vrsA03 | 2.60.90.40 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.58 | 47.0 | 4.57e-01 | 95.7% | 78.0% |
| 4en2A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.58 | 38.0 | 3.96e-01 | 95.7% | 74.0% |
| 2y7lA02 | 2.60.40.2430 | Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain | 0.57 | 42.0 | 3.88e-01 | 95.7% | 59.6% |
| 3wmqA00 | 2.60.40.2080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 42.0 | 4.54e-01 | 94.0% | 94.7% |
| 1vj2A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 38.0 | 3.94e-01 | 93.2% | 70.2% |
| 4xotA03 | 2.40.30.250 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.57 | 40.0 | 4.47e-01 | 97.4% | 98.8% |
| 1sq4A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 39.0 | 3.66e-01 | 94.9% | 57.6% |
| 3h7jA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 39.0 | 4.03e-01 | 94.0% | 73.7% |
| 3h8uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 39.0 | 3.88e-01 | 93.2% | 68.0% |
| 3h7jA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 38.0 | 3.90e-01 | 92.3% | 72.7% |
| 1sq4A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 38.0 | 3.75e-01 | 93.2% | 65.1% |
| 4dloA03 | 2.60.220.50 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › | 0.55 | 39.0 | 3.42e-01 | 92.3% | 49.1% |
| 2qf4A01 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.55 | 34.0 | 3.89e-01 | 91.5% | 89.9% |
| 5zbeA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 36.0 | 3.78e-01 | 91.5% | 73.8% |
| 2b8mA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 37.0 | 3.89e-01 | 93.2% | 76.1% |
| 2gu9A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 40.0 | 4.23e-01 | 93.2% | 87.4% |
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 37.0 | 3.65e-01 | 94.0% | 65.9% |
| 2vvfA02 | 2.60.120.730 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 4.12e-01 | 94.9% | 76.6% |
| 5j09A00 | 2.60.120.950 | Mainly Beta › Sandwich › Jelly Rolls › Circovirus capsid protein | 0.53 | 46.0 | 4.08e-01 | 95.7% | 100.0% |
| 4rd7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 38.0 | 3.87e-01 | 94.9% | 73.9% |
| 2edmA00 | 2.60.40.2770 | Mainly Beta › Sandwich › Immunoglobulin-like › WSSV envelope protein-like | 0.53 | 46.0 | 4.18e-01 | 96.6% | 93.2% |
| 1x8mA01 | 2.60.120.520 | Mainly Beta › Sandwich › Jelly Rolls › pectin degrading enzyme 5-keto 4- deoxyuronate isomerase, domain 1 | 0.52 | 39.0 | 3.90e-01 | 92.3% | 75.4% |
| 3kt7A01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 39.0 | 3.16e-01 | 80.3% | 78.5% |
| 2vqaA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 37.0 | 3.27e-01 | 93.2% | 49.2% |
| 5tipA02 | 2.70.9.20 | Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Major capsid protein Vp54 | 0.52 | 44.0 | 3.69e-01 | 94.9% | 78.6% |
| 1f15B00 | 2.60.120.530 | Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A | 0.52 | 44.0 | 3.83e-01 | 94.9% | 76.3% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 30.0 | 2.77e-01 | 94.9% | 40.3% |
| 1cwpA00 | 2.60.120.220 | Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain | 0.51 | 44.0 | 4.14e-01 | 96.6% | 89.9% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.51 | 43.0 | 4.31e-01 | 94.0% | 89.7% |
| 1uf2C02 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 4.10e-01 | 98.3% | 98.7% |
| 1tq5A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 36.0 | 3.59e-01 | 91.5% | 68.8% |
| 4llfD01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 3.97e-01 | 99.1% | 94.9% |
| 3aclA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 34.0 | 3.45e-01 | 93.2% | 67.8% |
| 4bcuA00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 3.84e-01 | 97.4% | 91.0% |
| 1bvp102 | 2.60.120.170 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 4.26e-01 | 97.4% | 100.0% |
| 3i7dA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 41.0 | 3.70e-01 | 94.0% | 64.3% |
| 7fcbC01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.50 | 37.0 | 2.93e-01 | 78.6% | 66.0% |
| 4b29A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 36.0 | 3.09e-01 | 93.2% | 45.1% |
| 3ht1A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 34.0 | 3.22e-01 | 95.7% | 57.0% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4029291 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.67 | 49.0 | 4.60e-01 | 95.7% | 62.9% |
| 5073452 | 7072.1.1.0 ↗ | beta sandwiches › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain › N-terminal half of TgpA periplasmic domain | 0.66 | 45.0 | 4.12e-01 | 96.6% | 52.3% |
| 5081149 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.66 | 40.0 | 4.91e-01 | 90.6% | 100.0% |
| 3205036 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.57 | 49.0 | 3.84e-01 | 97.4% | 44.1% |
| 4961572 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.57 | 39.0 | 3.81e-01 | 92.3% | 62.3% |
| 4947608 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 36.0 | 3.77e-01 | 89.7% | 69.1% |
| 3971446 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.56 | 39.0 | 3.96e-01 | 94.0% | 72.2% |
| 3875549 | 4081.1.1.2 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT | 0.56 | 45.0 | 3.83e-01 | 99.1% | 52.8% |
| 4950590 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 38.0 | 3.61e-01 | 91.5% | 60.0% |
| 4963436 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.55 | 38.0 | 3.92e-01 | 93.2% | 75.5% |
| 4026829 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 36.0 | 3.84e-01 | 90.6% | 77.8% |
| 4990898 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.55 | 42.0 | 4.59e-01 | 92.3% | 100.0% |
| 4972680 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 42.0 | 4.56e-01 | 93.2% | 98.9% |
| 3282947 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.54 | 38.0 | 4.07e-01 | 91.5% | 84.0% |
| 154310 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.53 | 38.0 | 3.81e-01 | 94.0% | 71.3% |
| 1389760 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.53 | 38.0 | 3.87e-01 | 94.9% | 73.9% |
| 1948 | 4242.1.1.1 ↗ | beta sandwiches › WSSV envelope protein-like › WSSV envelope protein-like › WSSV envelope protein-like › WSS_VP | 0.53 | 46.0 | 4.18e-01 | 96.6% | 93.2% |
| 3222026 | 10.4.1.9 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 | 0.52 | 33.0 | 3.34e-01 | 92.3% | 62.6% |
| 3278912 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.52 | 40.0 | 4.07e-01 | 95.7% | 81.7% |
| 4972683 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.51 | 39.0 | 4.25e-01 | 90.6% | 97.9% |
| 3611465 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 45.0 | 4.24e-01 | 94.9% | 95.7% |
| 5064784 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.51 | 39.0 | 3.86e-01 | 94.9% | 76.0% |
| 4680572 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.51 | 43.0 | 4.01e-01 | 92.3% | 93.1% |
| 3956532 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.50 | 34.0 | 3.48e-01 | 94.0% | 71.8% |
| 368152 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.50 | 41.0 | 3.69e-01 | 94.0% | 63.9% |
| 4969217 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.50 | 40.0 | 4.19e-01 | 99.1% | 96.2% |
D2
medium
residues 1-61
Domain cluster:
rep: IMGVR_UViG_2785510770_000005-2785510770-2785838215__D1-58
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16075.11 best | DUF4815 | 36.5 | 2.70e-09 | 91.8% | 8.6% |
D3
medium
residues 62-163
Domain cluster:
rep: IMGVR_UViG_3300026087_000110-3300026087-Ga0208113_10042681__D68-171
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.71 | 51.0 | 5.45e-01 | 90.2% | 87.2% |
| 1pj5A05 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.70 | 49.0 | 5.41e-01 | 88.2% | 93.6% |
| 3kyfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 52.0 | 5.00e-01 | 80.4% | 79.8% |
| 2derA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 52.0 | 5.50e-01 | 89.2% | 96.6% |
| 2hcjB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 48.0 | 5.02e-01 | 75.5% | 80.9% |
| 2qf4A02 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.67 | 48.0 | 5.03e-01 | 74.5% | 91.2% |
| 1xe1A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 45.0 | 4.79e-01 | 75.5% | 79.1% |
| 3girA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.65 | 46.0 | 5.08e-01 | 88.2% | 94.9% |
| 1g7sA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 47.0 | 4.65e-01 | 75.5% | 75.9% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 46.0 | 4.62e-01 | 76.5% | 80.8% |
| 1kjzA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 50.0 | 5.27e-01 | 89.2% | 95.7% |
| 3wndA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 51.0 | 5.29e-01 | 87.3% | 94.7% |
| 4zgnB00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 51.0 | 5.12e-01 | 90.2% | 91.3% |
| 2wyrB02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.60 | 43.0 | 4.62e-01 | 73.5% | 89.4% |
| 4x8iA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.59 | 41.0 | 4.47e-01 | 72.5% | 88.2% |
| 1b23P03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 48.0 | 5.00e-01 | 89.2% | 95.7% |
| 3cp7B02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 42.0 | 4.22e-01 | 77.5% | 77.1% |
| 2wanA01 | 2.60.40.1130 | Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain | 0.57 | 43.0 | 4.49e-01 | 88.2% | 88.4% |
| 3ufiA01 | 2.60.40.2620 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrillin-like | 0.56 | 45.0 | 3.95e-01 | 86.3% | 88.9% |
| 2e8yA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 41.0 | 4.12e-01 | 88.2% | 77.2% |
| 4ge1C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 39.0 | 3.22e-01 | 83.3% | 98.4% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4959076 | 1.1.7.149 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26500 | 0.72 | 52.0 | 4.30e-01 | 74.5% | 62.3% |
| 4123849 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.71 | 50.0 | 5.43e-01 | 90.2% | 88.2% |
| 4944212 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.70 | 55.0 | 5.90e-01 | 88.2% | 97.7% |
| 4982501 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 49.0 | 5.13e-01 | 73.5% | 85.3% |
| 4949489 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.69 | 53.0 | 5.75e-01 | 86.3% | 97.6% |
| 3237729 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 50.0 | 4.99e-01 | 75.5% | 76.2% |
| 5016579 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.69 | 50.0 | 5.53e-01 | 84.3% | 97.5% |
| 3210962 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 50.0 | 5.15e-01 | 75.5% | 85.3% |
| 3533150 | 11.1.1.1108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERB_head | 0.68 | 49.0 | 5.11e-01 | 74.5% | 86.3% |
| 3602123 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.68 | 49.0 | 5.46e-01 | 85.3% | 97.4% |
| 5064148 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 47.0 | 4.64e-01 | 73.5% | 90.9% |
| 4538458 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.66 | 49.0 | 5.35e-01 | 84.3% | 98.8% |
| 5040464 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 46.0 | 4.75e-01 | 71.6% | 85.3% |
| 5026244 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 46.0 | 4.89e-01 | 72.5% | 85.6% |
| 3636050 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.65 | 53.0 | 5.13e-01 | 87.3% | 89.6% |
| 4952364 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.65 | 45.0 | 4.91e-01 | 71.6% | 85.9% |
| 4990285 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.65 | 50.0 | 5.35e-01 | 90.2% | 94.4% |
| 3597932 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.65 | 54.0 | 5.61e-01 | 90.2% | 98.9% |
| 3166433 | 1.1.8.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_SelB | 0.65 | 50.0 | 5.32e-01 | 90.2% | 94.4% |
| 4668791 | 1.1.8.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C | 0.65 | 51.0 | 5.10e-01 | 90.2% | 81.9% |
| 4290531 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.64 | 51.0 | 5.38e-01 | 86.3% | 97.8% |
| 3663830 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.64 | 53.0 | 5.10e-01 | 90.2% | 95.7% |
| 4927036 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.64 | 47.0 | 5.08e-01 | 87.3% | 95.3% |
| 3566270 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.63 | 50.0 | 5.32e-01 | 90.2% | 95.6% |
| 4072524 | 1.1.7.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 | 0.63 | 46.0 | 4.52e-01 | 75.5% | 74.5% |
| 3180074 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.63 | 51.0 | 5.29e-01 | 86.3% | 95.8% |
| 5046884 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.63 | 51.0 | 5.44e-01 | 88.2% | 98.9% |
| 3726432 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.63 | 52.0 | 5.36e-01 | 88.2% | 97.9% |
| 4983877 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.63 | 50.0 | 5.25e-01 | 90.2% | 95.6% |
| 5075927 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.63 | 51.0 | 5.45e-01 | 88.2% | 100.0% |
| 4016300 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.63 | 50.0 | 5.23e-01 | 86.3% | 95.8% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.63 | 46.0 | 4.34e-01 | 76.5% | 68.3% |
| 4930314 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.62 | 48.0 | 5.21e-01 | 89.2% | 98.8% |
| 3725596 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.62 | 49.0 | 4.62e-01 | 90.2% | 68.8% |
| 5055336 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.62 | 49.0 | 5.22e-01 | 89.2% | 95.6% |
| 3968633 | 1.1.8.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_SelB | 0.62 | 49.0 | 5.21e-01 | 89.2% | 96.7% |
| 5024153 | 1.1.8.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › aSelB_III | 0.62 | 52.0 | 5.25e-01 | 90.2% | 98.0% |
| 3389762 | 1.1.8.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › euk_SelB_III | 0.62 | 51.0 | 4.69e-01 | 90.2% | 95.6% |
| 3206575 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.62 | 48.0 | 4.72e-01 | 89.2% | 76.4% |
| 3219717 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 49.0 | 5.17e-01 | 90.2% | 96.7% |
| 4514948 | 1.1.8.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_SelB | 0.61 | 50.0 | 5.18e-01 | 90.2% | 95.8% |
| 3393006 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.61 | 51.0 | 4.91e-01 | 89.2% | 81.7% |
| 5083379 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 49.0 | 5.20e-01 | 88.2% | 98.9% |
| 4150042 | 1.1.8.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_SelB | 0.61 | 48.0 | 5.11e-01 | 89.2% | 96.7% |
| 5022645 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 49.0 | 5.18e-01 | 88.2% | 97.8% |
| 5077659 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.61 | 51.0 | 4.98e-01 | 90.2% | 96.4% |
| 4230323 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.61 | 51.0 | 5.17e-01 | 90.2% | 98.0% |
| 3718978 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.61 | 50.0 | 4.58e-01 | 89.2% | 92.6% |
| 3928362 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.61 | 50.0 | 5.16e-01 | 89.2% | 93.9% |
| 1563513 | 1.1.8.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Ski7_3rd | 0.60 | 50.0 | 4.96e-01 | 89.2% | 88.8% |
| 3407712 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.60 | 50.0 | 5.15e-01 | 89.2% | 93.9% |
| 3618810 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.60 | 49.0 | 4.73e-01 | 89.2% | 79.7% |
| 4190012 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.59 | 49.0 | 3.85e-01 | 91.2% | 64.0% |
| 4927410 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.59 | 49.0 | 3.84e-01 | 91.2% | 64.4% |
| 3585142 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.59 | 49.0 | 4.64e-01 | 90.2% | 78.3% |
| 4029902 | 1.1.8.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › RIBIOP_C | 0.58 | 48.0 | 4.47e-01 | 90.2% | 78.5% |
| 4071075 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.58 | 48.0 | 4.84e-01 | 90.2% | 95.2% |
| 4129006 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.58 | 48.0 | 4.98e-01 | 90.2% | 95.8% |
| 3966451 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.58 | 48.0 | 4.93e-01 | 90.2% | 94.7% |
| 3504502 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.57 | 47.0 | 4.59e-01 | 90.2% | 80.7% |
| 3467987 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 46.0 | 4.53e-01 | 90.2% | 88.2% |
| 4969148 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 42.0 | 4.39e-01 | 90.2% | 88.4% |
| 3881192 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 38.0 | 3.25e-01 | 70.6% | 58.8% |
| 4969149 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 43.0 | 4.36e-01 | 91.2% | 86.9% |
| 2552765 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.52 | 44.0 | 4.33e-01 | 94.1% | 97.2% |
| 4400596 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.52 | 36.0 | 3.16e-01 | 70.6% | 76.2% |
| 3791839 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.52 | 34.0 | 3.72e-01 | 70.6% | 85.0% |
D4
medium
residues 164-269
Domain cluster:
rep: KM209248.1__AIM51494.1__HQ82_0237__00001__D197-272
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16075.11 best | DUF4815 | 36.2 | 3.30e-09 | 100.0% | 17.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xc8A00 | 2.60.40.2980 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 49.0 | 4.74e-01 | 100.0% | 76.9% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5038875 | 4166.1.1.0 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like | 0.68 | 53.0 | 5.14e-01 | 100.0% | 74.8% |
D5
medium
residues 270-351
Domain cluster:
rep: KU682439.2__AMQ65897.1__AAY80_267__00237__D399-459
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16075.11 best | DUF4815 | 34.2 | 1.30e-08 | 96.3% | 11.1% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fssA01 | 2.30.29.120 | Mainly Beta › Roll › PH-domain like › | 0.59 | 41.0 | 3.48e-01 | 72.0% | 61.0% |
| 2b1xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 39.0 | 3.20e-01 | 79.3% | 36.5% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 43.0 | 3.10e-01 | 87.8% | 38.1% |
| 6canA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 42.0 | 2.97e-01 | 86.6% | 32.1% |
| 2oplA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.55 | 43.0 | 3.50e-01 | 89.0% | 70.9% |
| 1ek9A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.54 | 40.0 | 2.59e-01 | 80.5% | 57.7% |
| 2e8gA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 32.0 | 2.86e-01 | 76.8% | 44.0% |
| 3p02A02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.51 | 41.0 | 3.41e-01 | 91.5% | 84.5% |
| 1xjvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 32.0 | 2.72e-01 | 82.9% | 36.6% |
| 6lofA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.50 | 39.0 | 3.23e-01 | 87.8% | 56.2% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589732 | 4166.1.1.2 ↗ | beta sandwiches › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Lactophage receptor-binding protein N-terminal domain-like › Caudo_bapla_N | 0.79 | 60.0 | 4.73e-01 | 80.5% | 41.9% |
| 5032209 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 38.0 | 3.32e-01 | 72.0% | 73.1% |
| 3453774 | 9.23.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin | 0.55 | 41.0 | 3.23e-01 | 79.3% | 47.9% |
| 3342595 | 9.23.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin | 0.55 | 41.0 | 3.20e-01 | 79.3% | 47.4% |
| 3828471 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.53 | 34.0 | 2.91e-01 | 70.7% | 38.8% |
| 3339690 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.53 | 33.0 | 2.89e-01 | 70.7% | 38.5% |
| 3225309 | 206.1.1.88 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL, DUF1679 | 0.53 | 37.0 | 2.43e-01 | 72.0% | 20.5% |
| 3481273 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 36.0 | 3.30e-01 | 70.7% | 65.7% |
| 3547051 | 7516.1.1.37 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CHGN | 0.52 | 34.0 | 3.21e-01 | 79.3% | 52.4% |
| 3981414 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.52 | 40.0 | 2.59e-01 | 84.1% | 59.5% |
| 3231318 | 11.1.1.673 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N | 0.52 | 40.0 | 3.76e-01 | 85.4% | 86.7% |
| 3581448 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 35.0 | 3.19e-01 | 80.5% | 50.4% |
| 3167073 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.51 | 35.0 | 2.88e-01 | 72.0% | 70.0% |
| 3601025 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.50 | 34.0 | 2.75e-01 | 72.0% | 34.5% |
| 5019817 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 31.0 | 2.88e-01 | 81.7% | 47.3% |
D6
medium
residues 352-429_510-562
Domain cluster:
rep: MN988519.1__QIG70811.1__EVB91_260__00240__D385-502
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.61 | 40.0 | 4.31e-01 | 80.2% | 78.9% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.59 | 31.0 | 3.86e-01 | 79.4% | 85.3% |
| 2yweA04 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 32.0 | 3.40e-01 | 96.9% | 61.4% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 31.0 | 3.78e-01 | 79.4% | 86.1% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.55 | 34.0 | 3.80e-01 | 77.9% | 79.0% |
| 1zboA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.55 | 37.0 | 3.92e-01 | 77.9% | 78.8% |
| 3ncvA02 | 3.30.1370.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain | 0.54 | 30.0 | 3.48e-01 | 78.6% | 75.8% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 32.0 | 3.89e-01 | 95.4% | 98.8% |
| 2imlA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 37.0 | 3.95e-01 | 90.8% | 86.7% |
| 2ewhA01 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.51 | 32.0 | 3.80e-01 | 96.9% | 96.5% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 33.0 | 3.48e-01 | 84.0% | 71.8% |
| 2gy5A04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 30.0 | 3.35e-01 | 93.1% | 75.8% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4988964 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.72 | 45.0 | 5.50e-01 | 92.4% | 97.6% |
| 4409090 | 1.1.8.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › YgfZ_barrel | 0.71 | 40.0 | 5.12e-01 | 93.1% | 96.0% |
| 4519111 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.68 | 39.0 | 4.66e-01 | 80.2% | 82.2% |
| 1688248 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.66 | 38.0 | 4.70e-01 | 93.9% | 93.7% |
| 4098005 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.65 | 38.0 | 4.56e-01 | 78.6% | 85.6% |
| 4395103 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 36.0 | 4.25e-01 | 80.2% | 78.9% |
| 3389361 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 35.0 | 4.13e-01 | 78.6% | 75.8% |
| 4260597 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 36.0 | 4.12e-01 | 80.2% | 78.9% |
| 4553723 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 36.0 | 4.12e-01 | 78.6% | 80.0% |
| 4085735 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 34.0 | 4.03e-01 | 79.4% | 80.0% |
| 4083333 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.59 | 36.0 | 4.09e-01 | 80.2% | 82.1% |
| 4212521 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.59 | 34.0 | 4.01e-01 | 80.2% | 82.2% |
| 4163756 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.58 | 35.0 | 3.97e-01 | 79.4% | 80.0% |
| 4066771 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.58 | 34.0 | 3.94e-01 | 80.9% | 80.0% |
| 4172288 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.57 | 32.0 | 3.74e-01 | 78.6% | 78.9% |
| 4211588 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 43.0 | 2.91e-01 | 79.4% | 28.2% |
| 1883205 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.55 | 41.0 | 4.40e-01 | 90.1% | 92.7% |
| 3501754 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.53 | 36.0 | 3.93e-01 | 78.6% | 84.8% |
| 2989727 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.52 | 38.0 | 4.17e-01 | 83.2% | 93.4% |
| 4152219 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.52 | 32.0 | 3.33e-01 | 100.0% | 65.6% |
| 4031101 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.51 | 37.0 | 3.73e-01 | 80.2% | 73.8% |
| 3256764 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 36.0 | 3.66e-01 | 92.4% | 74.6% |
D7
medium
residues 430-509
Domain cluster:
rep: NC_048679.1__YP_009835506.1__HWB34_gp31__00031__D132-209
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.73 | 64.0 | 6.29e-01 | 97.5% | 94.3% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.72 | 65.0 | 6.26e-01 | 100.0% | 97.8% |
| 3dclA02 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.72 | 65.0 | 6.26e-01 | 100.0% | 94.5% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.72 | 58.0 | 6.06e-01 | 100.0% | 98.6% |
| 1ep3B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.71 | 63.0 | 5.90e-01 | 100.0% | 99.0% |
| 2crvA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.69 | 60.0 | 5.78e-01 | 98.8% | 98.9% |
| 7syvx01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.67 | 59.0 | 4.95e-01 | 98.8% | 71.5% |
| 1mrzB02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.67 | 56.0 | 5.05e-01 | 100.0% | 67.0% |
| 2v31A01 | 2.40.30.180 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain | 0.66 | 58.0 | 5.48e-01 | 100.0% | 85.6% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 58.0 | 4.97e-01 | 100.0% | 71.0% |
| 4rlzA02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.66 | 56.0 | 5.15e-01 | 98.8% | 99.1% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 56.0 | 5.57e-01 | 100.0% | 98.8% |
| 3kw3B01 | 2.40.37.10 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › Lyase, Ornithine Decarboxylase; Chain A, domain 1 | 0.65 | 57.0 | 4.72e-01 | 100.0% | 69.4% |
| 4x8iA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.65 | 54.0 | 5.37e-01 | 95.0% | 100.0% |
| 5eanA01 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 55.0 | 5.06e-01 | 97.5% | 80.6% |
| 2wyrB02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.65 | 54.0 | 5.36e-01 | 95.0% | 100.0% |
| 4b43A03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.64 | 57.0 | 5.08e-01 | 98.8% | 72.2% |
| 4ohvA03 | 2.40.30.330 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Pre-mRNA cleavage complex subunit Clp1, C-terminal domain | 0.64 | 51.0 | 4.92e-01 | 86.3% | 95.5% |
| 1vq8T00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 46.0 | 4.00e-01 | 76.2% | 69.7% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.63 | 53.0 | 5.06e-01 | 96.2% | 95.9% |
| 3gg8C03 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.62 | 53.0 | 5.06e-01 | 96.2% | 95.9% |
| 2e70A00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 42.0 | 4.42e-01 | 70.0% | 78.9% |
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.62 | 52.0 | 4.07e-01 | 100.0% | 44.5% |
| 3isxA02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.62 | 51.0 | 5.03e-01 | 95.0% | 100.0% |
| 2xnjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 54.0 | 4.99e-01 | 100.0% | 97.1% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 42.0 | 4.59e-01 | 70.0% | 88.9% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 44.0 | 4.90e-01 | 76.2% | 100.0% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.61 | 51.0 | 4.75e-01 | 98.8% | 94.3% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.26e-01 | 75.0% | 83.1% |
| 6c6sD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 40.0 | 4.47e-01 | 96.2% | 91.7% |
| 1l1jA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.58 | 44.0 | 3.91e-01 | 86.3% | 55.9% |
| 1ydxA03 | 3.90.220.20 | Alpha Beta › Alpha-Beta Complex › Adenine-n6-DNA-methyltransferase TaqI; Chain A, domain 2 › DNA methylase specificity domains | 0.56 | 47.0 | 3.85e-01 | 100.0% | 50.7% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 46.0 | 4.48e-01 | 93.8% | 97.7% |
| 5ek8A01 | 2.60.40.3330 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 41.0 | 3.61e-01 | 86.3% | 56.3% |
| 3hnmA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 45.0 | 3.65e-01 | 100.0% | 50.9% |
| 1f15B00 | 2.60.120.530 | Mainly Beta › Sandwich › Jelly Rolls › Cucumovirus coat protein, subunit A | 0.51 | 45.0 | 3.48e-01 | 100.0% | 71.6% |
| 5h4cB00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.76e-01 | 100.0% | 92.6% |
| 2w47A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 45.0 | 3.83e-01 | 100.0% | 59.3% |
| 3nkgA00 | 2.60.120.790 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.54e-01 | 100.0% | 79.4% |
| 4jx0A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 3.67e-01 | 100.0% | 58.7% |
| 4oumA00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.75e-01 | 100.0% | 93.9% |
| 2d93A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 45.0 | 3.80e-01 | 100.0% | 59.0% |
| 1mfnA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 4.19e-01 | 100.0% | 86.0% |
| 1r0aH01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 43.0 | 3.81e-01 | 98.8% | 82.9% |
| 3c7fA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.50 | 44.0 | 3.69e-01 | 100.0% | 57.0% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964292 | 1.1.13.38 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_BR0599 | 0.85 | 80.0 | 7.07e-01 | 100.0% | 79.1% |
| 3973332 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.84 | 71.0 | 7.34e-01 | 100.0% | 96.0% |
| 4995824 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.77 | 66.0 | 6.84e-01 | 93.8% | 100.0% |
| 5078307 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.77 | 67.0 | 6.90e-01 | 96.2% | 100.0% |
| 1281033 | 1.1.7.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF4438 | 0.75 | 67.0 | 5.35e-01 | 100.0% | 78.1% |
| 4350337 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 62.0 | 6.41e-01 | 97.5% | 97.3% |
| 4521518 | 1.1.7.121 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Phage_BR0599 | 0.74 | 65.0 | 5.71e-01 | 100.0% | 66.1% |
| 4011239 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 63.0 | 6.35e-01 | 100.0% | 93.8% |
| 4980136 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.73 | 64.0 | 6.22e-01 | 96.2% | 96.6% |
| 4083044 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.72 | 60.0 | 6.23e-01 | 97.5% | 98.7% |
| 4316004 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 56.0 | 5.56e-01 | 100.0% | 81.2% |
| 4194551 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 58.0 | 5.99e-01 | 100.0% | 96.0% |
| 4066146 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 58.0 | 5.33e-01 | 98.8% | 68.6% |
| 4197746 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.71 | 58.0 | 5.73e-01 | 100.0% | 84.7% |
| 3198544 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 64.0 | 5.67e-01 | 100.0% | 95.7% |
| 3205875 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 60.0 | 5.12e-01 | 98.8% | 85.2% |
| 4959198 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.68 | 53.0 | 4.45e-01 | 85.0% | 92.8% |
| 4956344 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.67 | 53.0 | 5.45e-01 | 85.0% | 96.0% |
| 3188774 | 4.1.1.146 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_uL24m-like | 0.66 | 50.0 | 3.33e-01 | 80.0% | 41.9% |
| 4932996 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 55.0 | 5.37e-01 | 93.8% | 98.9% |
| 5069408 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.65 | 56.0 | 5.45e-01 | 97.5% | 100.0% |
| 4929623 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.65 | 51.0 | 5.28e-01 | 85.0% | 97.3% |
| 5011201 | 3613.1.1.0 ↗ | beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain | 0.65 | 51.0 | 4.90e-01 | 86.3% | 96.8% |
| 5029770 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 44.0 | 4.02e-01 | 71.2% | 53.3% |
| 5064548 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.65 | 40.0 | 4.67e-01 | 98.8% | 92.5% |
| 5028926 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.65 | 47.0 | 3.87e-01 | 76.2% | 59.3% |
| 3486328 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 44.0 | 4.89e-01 | 70.0% | 96.7% |
| 4421229 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.64 | 46.0 | 4.20e-01 | 73.8% | 100.0% |
| 5037204 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.64 | 46.0 | 4.05e-01 | 76.2% | 69.2% |
| 4937910 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.64 | 46.0 | 3.94e-01 | 76.2% | 63.8% |
| 3987212 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.64 | 55.0 | 5.06e-01 | 97.5% | 95.2% |
| 4627066 | 1.1.7.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Dna2_Rift | 0.64 | 55.0 | 4.96e-01 | 100.0% | 78.3% |
| 4994549 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.63 | 46.0 | 3.62e-01 | 76.2% | 50.3% |
| 3484214 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 46.0 | 3.60e-01 | 76.2% | 61.9% |
| 3590326 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.63 | 54.0 | 4.98e-01 | 96.2% | 97.1% |
| 4601878 | 4.1.1.295 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 | 0.63 | 46.0 | 3.89e-01 | 76.2% | 63.8% |
| 4639331 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.63 | 44.0 | 3.84e-01 | 73.8% | 97.6% |
| 4358801 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.63 | 46.0 | 4.14e-01 | 76.2% | 97.3% |
| 3700010 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 46.0 | 3.19e-01 | 77.5% | 38.9% |
| 3300738 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.63 | 46.0 | 3.75e-01 | 77.5% | 72.7% |
| 4304846 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.63 | 44.0 | 4.09e-01 | 72.5% | 93.0% |
| 4977697 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.63 | 45.0 | 4.06e-01 | 76.2% | 73.5% |
| 3254253 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.62 | 46.0 | 3.71e-01 | 77.5% | 69.0% |
| 4452122 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.62 | 45.0 | 3.94e-01 | 76.2% | 89.4% |
| 3264809 | 4.1.1.251 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5 | 0.62 | 42.0 | 4.82e-01 | 97.5% | 100.0% |
| 3340031 | 4.1.1.295 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 | 0.62 | 45.0 | 3.80e-01 | 76.2% | 61.5% |
| 3375181 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.62 | 45.0 | 3.71e-01 | 76.2% | 72.4% |
| 4055111 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.62 | 45.0 | 3.85e-01 | 75.0% | 96.0% |
| 4661207 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.62 | 43.0 | 4.15e-01 | 71.2% | 83.3% |
| 3821919 | 4.1.1.238 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 | 0.62 | 41.0 | 4.55e-01 | 70.0% | 90.0% |
| 4180317 | 4.1.1.295 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 | 0.62 | 45.0 | 3.87e-01 | 76.2% | 66.4% |
| 4177510 | 4.1.1.295 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 | 0.62 | 45.0 | 3.88e-01 | 76.2% | 60.8% |
| 4026161 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.62 | 45.0 | 3.90e-01 | 76.2% | 80.8% |
| 3598283 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 45.0 | 3.85e-01 | 77.5% | 87.7% |
| 4071168 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.62 | 45.0 | 3.98e-01 | 76.2% | 72.2% |
| 4181687 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.62 | 44.0 | 4.09e-01 | 75.0% | 99.0% |
| 4648652 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.62 | 42.0 | 3.90e-01 | 71.2% | 100.0% |
| 4203006 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.62 | 44.0 | 3.98e-01 | 75.0% | 95.5% |
| 4807995 | 4.1.1.314 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_uL24m-like | 0.61 | 50.0 | 3.52e-01 | 88.7% | 56.4% |
| 5050857 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.61 | 44.0 | 3.74e-01 | 76.2% | 66.2% |
| 4167587 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.61 | 44.0 | 4.34e-01 | 75.0% | 89.4% |
| 4163789 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.61 | 43.0 | 3.91e-01 | 73.8% | 99.0% |
| 3885050 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.60 | 42.0 | 3.23e-01 | 71.2% | 34.3% |
| 4171942 | 4.1.1.178 ↗ | beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 | 0.60 | 43.0 | 3.94e-01 | 73.8% | 100.0% |
| 3937194 | 4.1.1.249 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 | 0.60 | 43.0 | 4.64e-01 | 93.8% | 92.3% |
| 3604750 | 4.1.1.15 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L6e | 0.59 | 43.0 | 3.28e-01 | 76.2% | 34.6% |
| 3258767 | 4.1.1.24 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e | 0.59 | 41.0 | 3.35e-01 | 100.0% | 38.7% |
| 4255818 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 41.0 | 3.84e-01 | 72.5% | 59.0% |
| 3707479 | 4.1.1.5 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e | 0.59 | 42.0 | 3.14e-01 | 100.0% | 29.8% |
| 3741069 | 4.1.1.314 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_uL24m-like | 0.58 | 47.0 | 3.29e-01 | 88.7% | 50.6% |
| 3789132 | 4.1.1.146 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_uL24m-like | 0.58 | 47.0 | 3.44e-01 | 88.7% | 60.4% |
| 3413714 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.58 | 46.0 | 3.40e-01 | 87.5% | 60.0% |
| 2675860 | 4.1.1.15 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L6e | 0.58 | 41.0 | 3.67e-01 | 75.0% | 52.6% |
| 3925197 | 4.1.1.7 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 | 0.57 | 46.0 | 3.28e-01 | 87.5% | 61.2% |
| 5029655 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 39.0 | 4.33e-01 | 98.8% | 95.0% |
| 3723465 | 4.1.1.5 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e | 0.57 | 42.0 | 3.41e-01 | 100.0% | 42.8% |
| 3795823 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.57 | 46.0 | 3.28e-01 | 88.7% | 60.0% |
| 3202614 | 4.1.1.146 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_uL24m-like | 0.56 | 47.0 | 3.11e-01 | 91.3% | 52.5% |
| 3636432 | 4.1.1.314 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_uL24m-like | 0.56 | 46.0 | 3.34e-01 | 91.3% | 62.9% |
| 3660964 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.55 | 39.0 | 3.66e-01 | 100.0% | 60.0% |
| 3698762 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.55 | 39.0 | 3.64e-01 | 100.0% | 59.2% |
| 1005556 | 10.2.1.65 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › VP17_central_barrel | 0.54 | 45.0 | 4.38e-01 | 93.8% | 96.6% |
| 4029199 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 47.0 | 2.69e-01 | 100.0% | 9.8% |
| 5054535 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.52 | 46.0 | 4.16e-01 | 100.0% | 71.8% |
| 4279051 | 4.1.1.95 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L26 | 0.51 | 46.0 | 4.19e-01 | 100.0% | 76.2% |
| 3938261 | 4.1.1.360 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 | 0.51 | 42.0 | 3.38e-01 | 97.5% | 47.3% |
D8
medium
residues 563-577_832-877
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 35.0 | 3.29e-01 | 75.4% | 72.5% |
D9
medium
residues 700-736_814-831_878-901
Domain cluster:
representative