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LacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00032
Bact-VirLacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00032
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-51
Domain cluster:
representative
CATH (82)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ov9C01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.87 | 66.0 | 4.59e-01 | 80.4% | 28.6% |
| 2cyeC00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.86 | 64.0 | 4.67e-01 | 80.4% | 31.1% |
| 1c8uA02 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.84 | 63.0 | 4.76e-01 | 80.4% | 35.7% |
| 2cntA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.82 | 74.0 | 5.09e-01 | 96.1% | 47.7% |
| 2egjA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.81 | 61.0 | 4.52e-01 | 80.4% | 32.5% |
| 1z54A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.81 | 60.0 | 4.40e-01 | 80.4% | 31.1% |
| 3lw3B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.81 | 61.0 | 4.36e-01 | 80.4% | 29.9% |
| 2hx5A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.80 | 60.0 | 4.29e-01 | 80.4% | 28.7% |
| 5f47B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.80 | 72.0 | 5.04e-01 | 100.0% | 59.2% |
| 2wpwC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.80 | 69.0 | 4.18e-01 | 96.1% | 26.8% |
| 1xf8A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.80 | 71.0 | 4.87e-01 | 98.0% | 49.7% |
| 3fixA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.79 | 71.0 | 4.89e-01 | 100.0% | 58.2% |
| 3dsbA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.79 | 70.0 | 5.52e-01 | 98.0% | 88.1% |
| 6wqbA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.79 | 69.0 | 4.90e-01 | 96.1% | 52.9% |
| 6r3wA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.78 | 67.0 | 4.68e-01 | 96.1% | 34.2% |
| 2k5tA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.78 | 72.0 | 5.22e-01 | 100.0% | 53.9% |
| 4e2aA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.78 | 68.0 | 4.64e-01 | 96.1% | 57.6% |
| 3e29B00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.77 | 59.0 | 4.30e-01 | 82.4% | 32.1% |
| 4iusA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.76 | 68.0 | 4.29e-01 | 100.0% | 28.4% |
| 3cygA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.76 | 59.0 | 4.53e-01 | 86.3% | 52.1% |
| 3frmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.76 | 66.0 | 4.15e-01 | 96.1% | 31.3% |
| 3eetA02 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.75 | 64.0 | 4.47e-01 | 98.0% | 80.4% |
| 3cjyA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.75 | 60.0 | 3.81e-01 | 88.2% | 55.3% |
| 1g1bA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.75 | 65.0 | 4.57e-01 | 100.0% | 72.0% |
| 2ozgA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.75 | 64.0 | 4.47e-01 | 96.1% | 51.8% |
| 6a6yA00 | 2.60.40.1490 | Mainly Beta › Sandwich › Immunoglobulin-like › Histone chaperone ASF1-like | 0.74 | 63.0 | 4.60e-01 | 100.0% | 74.3% |
| 1h6eA02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.73 | 54.0 | 4.22e-01 | 78.4% | 84.8% |
| 1q2yA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.73 | 62.0 | 4.49e-01 | 94.1% | 52.9% |
| 3d2uE01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.73 | 62.0 | 4.15e-01 | 96.1% | 25.5% |
| 2v1oB00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.73 | 59.0 | 4.24e-01 | 90.2% | 53.4% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.73 | 60.0 | 4.19e-01 | 94.1% | 28.7% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 62.0 | 4.47e-01 | 96.1% | 40.8% |
| 3vl9B00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.72 | 52.0 | 3.37e-01 | 76.5% | 85.5% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 61.0 | 4.60e-01 | 96.1% | 42.7% |
| 5jenA01 | 3.30.565.40 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like | 0.72 | 55.0 | 4.39e-01 | 86.3% | 43.2% |
| 2hboA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.72 | 52.0 | 3.91e-01 | 80.4% | 30.8% |
| 4n81A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.72 | 62.0 | 4.56e-01 | 98.0% | 39.0% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.71 | 60.0 | 4.38e-01 | 100.0% | 38.6% |
| 3lv0A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.71 | 62.0 | 4.55e-01 | 98.0% | 38.1% |
| 1lqvB00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.71 | 56.0 | 3.93e-01 | 100.0% | 26.6% |
| 2bjiA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.71 | 62.0 | 4.46e-01 | 98.0% | 36.8% |
| 3o6uC00 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.71 | 59.0 | 4.56e-01 | 96.1% | 64.7% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.70 | 60.0 | 4.41e-01 | 100.0% | 41.0% |
| 5esyA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.70 | 62.0 | 4.04e-01 | 98.0% | 32.7% |
| 1ka1A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.70 | 61.0 | 3.99e-01 | 98.0% | 31.1% |
| 4esqA00 | 3.40.1000.70 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain | 0.70 | 58.0 | 3.91e-01 | 94.1% | 25.3% |
| 3imhA00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.70 | 53.0 | 3.25e-01 | 96.1% | 13.0% |
| 3ey5A01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.70 | 58.0 | 4.15e-01 | 94.1% | 50.3% |
| 2kzxA00 | 3.90.1010.20 | Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › | 0.69 | 57.0 | 4.28e-01 | 94.1% | 99.2% |
| 4o7iA01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.69 | 60.0 | 4.08e-01 | 98.0% | 29.7% |
| 3d2uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 51.0 | 4.23e-01 | 80.4% | 80.4% |
| 3it8D01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.69 | 57.0 | 3.91e-01 | 98.0% | 26.7% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 57.0 | 4.36e-01 | 94.1% | 42.5% |
| 7dd9A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.68 | 56.0 | 3.61e-01 | 94.1% | 21.0% |
| 2qh9A00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.68 | 59.0 | 4.07e-01 | 98.0% | 32.6% |
| 3lygA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 56.0 | 4.35e-01 | 96.1% | 45.8% |
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.67 | 57.0 | 4.45e-01 | 98.0% | 81.9% |
| 5evhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 56.0 | 4.26e-01 | 94.1% | 43.8% |
| 4xpkA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.67 | 55.0 | 4.07e-01 | 96.1% | 54.6% |
| 5n1tA03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.67 | 51.0 | 4.60e-01 | 84.3% | 78.9% |
| 3nqzA01 | 3.10.450.490 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 54.0 | 4.59e-01 | 96.1% | 59.3% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 55.0 | 4.14e-01 | 94.1% | 43.8% |
| 4eeeA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 49.0 | 3.79e-01 | 80.4% | 72.2% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.66 | 54.0 | 4.48e-01 | 92.2% | 55.4% |
| 1e3dB00 | 1.10.645.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome-c3 Hydrogenase; chain B › Cytochrome-c3 Hydrogenase, chain B | 0.66 | 57.0 | 3.24e-01 | 98.0% | 93.9% |
| 3fcyA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.65 | 54.0 | 3.35e-01 | 98.0% | 25.2% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.65 | 55.0 | 3.55e-01 | 100.0% | 19.8% |
| 6gmhC01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.64 | 49.0 | 3.54e-01 | 82.4% | 80.6% |
| 5tgnA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 53.0 | 4.21e-01 | 94.1% | 48.6% |
| 3k7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 50.0 | 4.05e-01 | 90.2% | 46.3% |
| 5dzeA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 54.0 | 3.65e-01 | 98.0% | 27.1% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.62 | 48.0 | 3.95e-01 | 92.2% | 46.8% |
| 2mdrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.62 | 52.0 | 4.34e-01 | 100.0% | 56.4% |
| 1sr9A02 | 3.30.160.270 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Alpha-isopropylmalate synthase LeuA, regulatory domain | 0.61 | 49.0 | 3.51e-01 | 92.2% | 34.1% |
| 1x49A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 50.0 | 4.67e-01 | 100.0% | 75.7% |
| 2ztgA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.60 | 52.0 | 3.35e-01 | 100.0% | 75.0% |
| 4hz9B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 47.0 | 3.79e-01 | 96.1% | 43.1% |
| 5jozA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 49.0 | 3.11e-01 | 98.0% | 18.0% |
| 2khxA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 48.0 | 4.30e-01 | 100.0% | 75.9% |
| 1eurA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 49.0 | 2.98e-01 | 100.0% | 27.4% |
| 3uepA00 | 2.30.330.10 | Mainly Beta › Roll › Surface presentation of antigens (SPOA) › SpoA-like | 0.57 | 48.0 | 4.13e-01 | 100.0% | 84.7% |
| 7k98B04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 46.0 | 3.07e-01 | 98.0% | 24.2% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5062515 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.90 | 81.0 | 5.81e-01 | 98.0% | 38.5% |
| 5044313 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.90 | 79.0 | 5.47e-01 | 96.1% | 54.5% |
| 3781393 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.86 | 75.0 | 6.28e-01 | 96.1% | 60.7% |
| 5078098 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.85 | 78.0 | 5.42e-01 | 100.0% | 55.5% |
| 3957265 | 222.1.1.4 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT | 0.84 | 64.0 | 5.53e-01 | 80.4% | 57.3% |
| 3574744 | 213.1.1.62 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ATE_N+ATE_C | 0.84 | 75.0 | 4.46e-01 | 100.0% | 28.9% |
| 4027772 | 213.1.1.10 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Leu_Phe_trans | 0.83 | 76.0 | 4.66e-01 | 100.0% | 30.0% |
| 4998670 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.83 | 66.0 | 5.42e-01 | 96.1% | 48.9% |
| 3994059 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.83 | 63.0 | 5.45e-01 | 80.4% | 54.7% |
| 4960887 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.83 | 74.0 | 5.65e-01 | 100.0% | 85.2% |
| 3736741 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.83 | 62.0 | 5.30e-01 | 80.4% | 51.2% |
| 3431546 | 213.1.1.51 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB_like | 0.82 | 72.0 | 4.20e-01 | 100.0% | 29.8% |
| 3725219 | 213.1.1.62 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ATE_N+ATE_C | 0.82 | 74.0 | 4.72e-01 | 100.0% | 43.1% |
| 4889524 | 222.1.1.29 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › Acyl_transf_1, MaoC_dehydratas | 0.82 | 61.0 | 4.42e-01 | 80.4% | 30.4% |
| 4470525 | 331.3.1.20 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › KshA_C | 0.82 | 73.0 | 4.57e-01 | 98.0% | 24.5% |
| 4986587 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.81 | 73.0 | 5.54e-01 | 100.0% | 86.1% |
| 3995220 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.81 | 67.0 | 4.70e-01 | 92.2% | 30.0% |
| 4946507 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.81 | 69.0 | 5.98e-01 | 100.0% | 62.7% |
| 3785052 | 213.1.1.62 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ATE_N+ATE_C | 0.81 | 74.0 | 4.25e-01 | 100.0% | 31.9% |
| 3973692 | 213.1.1.51 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › FemAB_like | 0.80 | 73.0 | 4.72e-01 | 100.0% | 42.4% |
| 3282009 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.80 | 69.0 | 4.81e-01 | 96.1% | 57.5% |
| 3385817 | 213.1.1.62 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ATE_N+ATE_C | 0.80 | 70.0 | 4.42e-01 | 96.1% | 36.6% |
| 3169041 | 213.1.1.62 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ATE_N+ATE_C | 0.80 | 73.0 | 4.18e-01 | 100.0% | 32.0% |
| 1172093 | 222.1.1.10 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › 4HBT_3 | 0.80 | 60.0 | 4.61e-01 | 80.4% | 37.3% |
| 5049873 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.80 | 70.0 | 5.02e-01 | 98.0% | 62.8% |
| 3814437 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.80 | 67.0 | 4.69e-01 | 96.1% | 37.6% |
| 4987839 | 213.1.1.53 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_6 | 0.79 | 72.0 | 5.00e-01 | 100.0% | 51.0% |
| 3738285 | 213.1.1.62 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ATE_N+ATE_C | 0.79 | 70.0 | 4.22e-01 | 100.0% | 35.9% |
| 5032421 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.79 | 72.0 | 4.83e-01 | 100.0% | 46.9% |
| 3284607 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.79 | 58.0 | 4.68e-01 | 80.4% | 41.0% |
| 4423405 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.79 | 72.0 | 4.92e-01 | 100.0% | 52.1% |
| 4927674 | 814.1.1.0 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase | 0.79 | 68.0 | 4.96e-01 | 100.0% | 72.9% |
| 1267878 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.78 | 69.0 | 4.86e-01 | 98.0% | 57.1% |
| 3255634 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.78 | 68.0 | 3.97e-01 | 96.1% | 12.4% |
| 3603312 | 814.1.1.1 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › Rv2949c-like | 0.78 | 68.0 | 4.77e-01 | 100.0% | 76.1% |
| 3587367 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.78 | 69.0 | 4.81e-01 | 100.0% | 47.3% |
| 4299577 | 3121.1.1.15 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › FabA | 0.78 | 58.0 | 5.23e-01 | 80.4% | 58.6% |
| 4884528 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.78 | 70.0 | 4.96e-01 | 100.0% | 49.7% |
| 5016827 | 5090.1.1.11 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S_layer_N | 0.78 | 65.0 | 4.91e-01 | 96.1% | 39.5% |
| 4984958 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.77 | 67.0 | 4.01e-01 | 98.0% | 14.0% |
| 4277720 | 213.1.1.62 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ATE_N+ATE_C | 0.77 | 67.0 | 4.30e-01 | 96.1% | 36.4% |
| 5049225 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.77 | 66.0 | 4.64e-01 | 98.0% | 52.7% |
| 4960585 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.77 | 70.0 | 4.45e-01 | 100.0% | 32.9% |
| 4386515 | 330.1.1.30 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF27148 | 0.76 | 69.0 | 6.32e-01 | 98.0% | 86.2% |
| 3288311 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.76 | 67.0 | 4.61e-01 | 98.0% | 53.3% |
| 5049477 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.76 | 64.0 | 6.07e-01 | 94.1% | 80.0% |
| 1833186 | 213.1.1.27 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_7 | 0.75 | 66.0 | 4.64e-01 | 96.1% | 53.0% |
| 4994210 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.75 | 63.0 | 3.88e-01 | 98.0% | 15.3% |
| 4485546 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.75 | 62.0 | 4.14e-01 | 98.0% | 24.9% |
| 1883326 | 4998.2.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE insert domain › Flagellar hook protein flgE insert domain › FlgE_2nd | 0.74 | 63.0 | 4.76e-01 | 98.0% | 55.1% |
| 5047049 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.74 | 62.0 | 3.49e-01 | 96.1% | 7.9% |
| 4572123 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.74 | 61.0 | 4.10e-01 | 98.0% | 24.2% |
| 408891 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.74 | 63.0 | 4.55e-01 | 100.0% | 38.1% |
| 5018156 | 213.1.1.31 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 | 0.74 | 67.0 | 4.73e-01 | 100.0% | 54.5% |
| 3940074 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 53.0 | 3.89e-01 | 78.4% | 30.0% |
| 4653627 | 4252.1.1.3 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DA_C | 0.73 | 63.0 | 4.39e-01 | 98.0% | 44.2% |
| 3217076 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.73 | 60.0 | 4.60e-01 | 92.2% | 46.1% |
| 4446877 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.72 | 63.0 | 3.97e-01 | 98.0% | 24.2% |
| 3743943 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.72 | 63.0 | 3.67e-01 | 100.0% | 11.7% |
| 3290610 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.71 | 56.0 | 3.50e-01 | 92.2% | 14.9% |
| 3291057 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.71 | 58.0 | 5.20e-01 | 90.2% | 68.6% |
| 3178555 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.71 | 57.0 | 3.17e-01 | 92.2% | 7.3% |
| 3520126 | 5.1.4.329 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 | 0.70 | 60.0 | 3.56e-01 | 96.1% | 26.9% |
| 3784426 | 11.2.1.78 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_DCK_4th | 0.69 | 59.0 | 4.31e-01 | 100.0% | 74.0% |
| 3725709 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.69 | 58.0 | 4.59e-01 | 98.0% | 44.5% |
| 3263815 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.69 | 61.0 | 5.02e-01 | 98.0% | 67.8% |
| 3431175 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.69 | 57.0 | 4.75e-01 | 100.0% | 55.0% |
| 4194213 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.68 | 61.0 | 5.50e-01 | 100.0% | 77.1% |
| 4968725 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.68 | 57.0 | 3.53e-01 | 98.0% | 15.5% |
| 3203065 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.68 | 50.0 | 3.75e-01 | 80.4% | 34.1% |
| 4012404 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.68 | 56.0 | 4.38e-01 | 100.0% | 68.8% |
| 177706 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.68 | 56.0 | 4.33e-01 | 96.1% | 64.8% |
| 4968133 | 4312.1.1.1 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › BrnT_toxin | 0.67 | 55.0 | 4.53e-01 | 92.2% | 53.8% |
| 3716329 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.67 | 55.0 | 3.91e-01 | 98.0% | 29.1% |
| 4528719 | 4.1.1.438 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27440 | 0.67 | 53.0 | 4.92e-01 | 90.2% | 69.2% |
| 4031480 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.65 | 54.0 | 4.52e-01 | 94.1% | 66.7% |
| 4048167 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.65 | 57.0 | 5.14e-01 | 100.0% | 75.7% |
| 3213695 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.64 | 52.0 | 3.95e-01 | 94.1% | 40.0% |
| 3391128 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 51.0 | 3.03e-01 | 92.2% | 12.9% |
| 3915850 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.63 | 47.0 | 2.75e-01 | 82.4% | 16.4% |
| 3660933 | 10.1.1.11 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_16 | 0.63 | 53.0 | 3.61e-01 | 98.0% | 26.3% |
| 3213694 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.62 | 50.0 | 3.94e-01 | 94.1% | 47.0% |
| 3849007 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.62 | 49.0 | 2.83e-01 | 94.1% | 20.7% |
| 4512246 | 2004.1.1.615 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_23, AAA_29 | 0.61 | 49.0 | 2.83e-01 | 94.1% | 20.8% |
| 3599752 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 50.0 | 3.01e-01 | 96.1% | 14.2% |
| 1094910 | 243.1.1.21 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3828 | 0.60 | 47.0 | 3.79e-01 | 96.1% | 43.1% |
| 5073601 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 43.0 | 3.68e-01 | 82.4% | 73.7% |
| 3589966 | 7579.1.1.3 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 | 0.59 | 49.0 | 3.12e-01 | 94.1% | 31.9% |
| 3177409 | 330.1.1.13 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Mgm101p | 0.59 | 48.0 | 3.53e-01 | 100.0% | 64.8% |
| 3729648 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.58 | 45.0 | 3.58e-01 | 96.1% | 38.5% |
| 3996555 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 42.0 | 3.54e-01 | 90.2% | 65.3% |
D2
medium
residues 52-108
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u5tA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 47.0 | 4.28e-01 | 71.9% | 78.7% |
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 43.0 | 3.96e-01 | 75.4% | 92.0% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 43.0 | 3.98e-01 | 75.4% | 71.1% |
| 4h0eA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 3.96e-01 | 73.7% | 78.6% |
| 4p9fA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 41.0 | 3.93e-01 | 71.9% | 77.6% |
| 3keyA02 | 3.30.1370.230 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain | 0.59 | 42.0 | 3.79e-01 | 80.7% | 68.2% |
| 2icwG02 | 1.10.10.530 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › mam-mhc complex, Chain D, Domain 2 | 0.57 | 40.0 | 3.62e-01 | 78.9% | 98.9% |
| 3efoB01 | 1.20.120.730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain | 0.56 | 46.0 | 3.51e-01 | 96.5% | 66.9% |
| 1y74A00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.56 | 44.0 | 4.49e-01 | 96.5% | 86.0% |
| 2kp8A00 | 1.20.5.170 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 48.0 | 4.42e-01 | 96.5% | 79.2% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 46.0 | 3.92e-01 | 98.2% | 74.5% |
| 2q0tB01 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.53 | 43.0 | 2.96e-01 | 98.2% | 67.9% |
| 1oizA01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.52 | 34.0 | 3.21e-01 | 100.0% | 55.6% |
| 1pd3A00 | 1.10.287.230 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 40.0 | 4.10e-01 | 84.2% | 100.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3490702 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.58 | 47.0 | 3.35e-01 | 94.7% | 44.7% |
| 3740848 | 212.1.1.34 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › EFL1 | 0.57 | 43.0 | 3.00e-01 | 86.0% | 57.7% |
| 4336612 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.55 | 50.0 | 3.02e-01 | 98.2% | 29.9% |
| 3752555 | 620.1.1.0 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases | 0.55 | 49.0 | 3.60e-01 | 100.0% | 66.0% |
| 3496163 | 109.35.1.14 ↗ | alpha superhelices › Repetitive alpha hairpins › Proteasome/cyclosome (PC) repeat › Proteasome/cyclosome (PC) repeat › PC_rep, HEAT_2, RPN2_N | 0.53 | 41.0 | 2.35e-01 | 93.0% | 37.0% |