←Back to structures
LacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00194
Bact-VirLacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00194
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-88
Domain cluster:
rep: IMGVR_UViG_3300025902_000346-3300025902-Ga0209202_10104865__D5-70
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 35.0 | 3.81e-01 | 86.6% | 84.6% |
| 1w15A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.53 | 38.0 | 3.32e-01 | 76.8% | 92.4% |
| 2cm5A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 36.0 | 3.14e-01 | 75.6% | 86.7% |
| 3fbqA02 | 2.60.40.1640 | Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. | 0.51 | 35.0 | 3.08e-01 | 74.4% | 93.5% |
| 1i2mB00 | 2.130.10.30 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II | 0.51 | 39.0 | 2.60e-01 | 85.4% | 98.2% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 33.0 | 3.62e-01 | 89.0% | 88.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4888716 | 601.51.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-helical domain in phase 1 flagellin › alpha-helical domain in phase 1 flagellin › Flagellin_N,Flagellin_C | 0.63 | 34.0 | 3.02e-01 | 78.0% | 35.0% |
| 3209529 | 241.10.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain › GAS2 | 0.61 | 35.0 | 3.95e-01 | 84.1% | 76.7% |
| 5042160 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 35.0 | 4.01e-01 | 100.0% | 83.3% |
| 3386763 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 34.0 | 3.76e-01 | 100.0% | 81.5% |
| 3839028 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 34.0 | 3.71e-01 | 100.0% | 81.5% |
| 3184125 | 223.3.1.0 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins | 0.53 | 36.0 | 3.21e-01 | 100.0% | 48.3% |
| 4308185 | 4263.2.1.0 ↗ | a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain | 0.52 | 37.0 | 3.38e-01 | 76.8% | 85.0% |
| 4508412 | 4.1.1.437 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29224 | 0.52 | 33.0 | 3.80e-01 | 93.9% | 90.0% |
| 4001291 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 35.0 | 2.71e-01 | 72.0% | 68.3% |
| 3487226 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 38.0 | 3.77e-01 | 79.3% | 85.9% |