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LacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00231
Bact-VirLacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00231
Identity
- Kingdom:
- phage
Quality
78.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-80
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e6zA00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 45.0 | 4.65e-01 | 86.9% | 81.4% |
| 1ysqA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.55 | 47.0 | 3.39e-01 | 98.4% | 97.8% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 42.0 | 3.40e-01 | 91.8% | 44.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3660563 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 47.0 | 4.61e-01 | 85.2% | 95.4% |
| 3908017 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.56 | 42.0 | 3.94e-01 | 85.2% | 77.5% |
| 5049591 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 41.0 | 4.08e-01 | 83.6% | 93.8% |
| 3696092 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.52 | 44.0 | 4.24e-01 | 100.0% | 91.4% |
| 3504779 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 36.0 | 3.12e-01 | 78.7% | 71.3% |
| 3415450 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.52 | 37.0 | 3.34e-01 | 77.0% | 64.7% |