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LacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00259
Bact-VirLacPavin_0818_WC45_scaffold_65992_prodigal-single.1__X__X__00259
Identity
- Kingdom:
- phage
Quality
84.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-54
Domain cluster:
representative
D2
medium
residues 55-108
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nqkA02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.53 | 42.0 | 3.13e-01 | 92.6% | 88.7% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3839706 | 378.1.1.30 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › PF30178 | 0.87 | 69.0 | 5.27e-01 | 85.2% | 40.9% |
| 4313114 | 378.1.1.30 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › PF30178 | 0.84 | 67.0 | 5.05e-01 | 85.2% | 39.2% |
| 3918113 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.71 | 53.0 | 3.95e-01 | 81.5% | 32.1% |
| 3882094 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.70 | 55.0 | 3.65e-01 | 100.0% | 20.5% |
| 3883616 | 378.1.1.1 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_NS | 0.67 | 54.0 | 3.50e-01 | 100.0% | 18.9% |
| None | — | 0.65 | 56.0 | 4.17e-01 | 100.0% | 38.6% | |
| 3324312 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.64 | 49.0 | 3.93e-01 | 83.3% | 40.9% |
| 3434619 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.64 | 49.0 | 3.93e-01 | 83.3% | 39.8% |
| 3939015 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 47.0 | 3.67e-01 | 90.7% | 64.4% |
| 4511042 | 5090.1.1.7 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › HAP2-GCS1 | 0.59 | 49.0 | 2.98e-01 | 100.0% | 63.2% |
| 3481679 | 3343.1.1.1 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal | 0.56 | 42.0 | 2.40e-01 | 83.3% | 12.7% |
| 3587162 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 42.0 | 3.16e-01 | 90.7% | 35.3% |
| 3183043 | 874.1.1.16 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain › DUF3425 | 0.54 | 40.0 | 2.92e-01 | 83.3% | 37.9% |