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LacPavin_0818_WC50_scaffold_3810_prodigal-single.1__X__X__00005

Bact-Vir

LacPavin_0818_WC50_scaffold_3810_prodigal-single.1__X__X__00005

Identity

Kingdom:
phage

Quality

84.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-61
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n62C02 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.66 44.0 3.73e-01 70.5% 81.0%
4zohB03 3.30.390.50 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain 0.65 44.0 3.71e-01 70.5% 80.4%
4jgjA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 41.0 3.47e-01 75.4% 50.0%
1euvA02 3.30.310.130 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Ubiquitin-related 0.54 44.0 3.72e-01 90.2% 92.4%
4fbcA01 3.40.420.10 Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 0.54 43.0 3.28e-01 96.7% 78.2%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3941741 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 43.0 3.27e-01 90.2% 92.9%
D2 medium residues 305-366
PDB