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LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00004
Bact-VirLacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00004
Identity
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-151
Domain cluster:
rep: ERMGT119_2_scaffold_6_prodigal-single.1__X__X__00065__D3-135
D2
high
residues 391-408_557-678
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d33A00 | 2.60.40.3080 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.70 | 46.0 | 5.58e-01 | 70.0% | 100.0% |
| 1bquA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 45.0 | 5.14e-01 | 72.9% | 93.0% |
| 2y7lA02 | 2.60.40.2430 | Mainly Beta › Sandwich › Immunoglobulin-like › Agglutinin-like protein, N-terminal domain, N2 subdomain | 0.67 | 46.0 | 4.53e-01 | 70.7% | 90.7% |
| 2z0uA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.67 | 46.0 | 4.80e-01 | 70.0% | 93.0% |
| 2n59A00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 45.0 | 5.16e-01 | 70.0% | 99.0% |
| 1kshB00 | 2.70.50.40 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › GMP phosphodiesterase, delta subunit | 0.65 | 49.0 | 4.93e-01 | 77.9% | 88.7% |
| 2a74D01 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.62 | 43.0 | 4.52e-01 | 70.7% | 91.4% |
| 2h41A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 40.0 | 4.71e-01 | 76.4% | 95.8% |
| 2e56A00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.60 | 42.0 | 4.16e-01 | 70.0% | 93.8% |
| 1x5hA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 41.0 | 4.28e-01 | 70.0% | 75.0% |
| 1gyvA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.60 | 43.0 | 4.65e-01 | 75.7% | 96.7% |
| 2r5oA01 | 2.70.50.60 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › abc- transporter (atp binding component) like domain | 0.60 | 44.0 | 4.36e-01 | 77.9% | 93.4% |
| 2m83A00 | 2.60.40.2440 | Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain | 0.59 | 45.0 | 4.60e-01 | 80.0% | 99.3% |
| 1a9vA00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 45.0 | 4.64e-01 | 77.9% | 99.2% |
| 4gqzA00 | 2.60.40.3700 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 42.0 | 4.05e-01 | 79.3% | 89.1% |
| 8a28A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 41.0 | 4.08e-01 | 76.4% | 100.0% |
| 6cxhA03 | 2.60.40.1580 | Mainly Beta › Sandwich › Immunoglobulin-like › Particulate methane monooxygenase, b subunit. Chain: A, domain 3 | 0.54 | 39.0 | 4.01e-01 | 74.3% | 97.1% |
| 4ae7A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 39.0 | 3.54e-01 | 77.9% | 94.6% |
| 2q1fA01 | 2.60.120.430 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding lectin | 0.51 | 43.0 | 4.13e-01 | 93.6% | 98.8% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3372684 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.64 | 46.0 | 5.10e-01 | 79.3% | 93.6% |
| 5083843 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 42.0 | 5.00e-01 | 76.4% | 100.0% |
| 3812909 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.63 | 46.0 | 5.09e-01 | 79.3% | 93.8% |
| 3826424 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.63 | 44.0 | 4.96e-01 | 77.9% | 92.7% |
| 4981931 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 44.0 | 4.76e-01 | 73.6% | 94.2% |
| 3257643 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.62 | 49.0 | 4.47e-01 | 85.7% | 91.2% |
| 3816389 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.61 | 44.0 | 4.97e-01 | 77.1% | 94.5% |
| 3309592 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.61 | 46.0 | 4.99e-01 | 82.1% | 91.7% |
| 3829715 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.61 | 44.0 | 4.83e-01 | 80.7% | 90.4% |
| 3825126 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.60 | 44.0 | 4.57e-01 | 79.3% | 81.4% |
| 3828945 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.60 | 45.0 | 4.76e-01 | 79.3% | 89.1% |
| 135881 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.59 | 44.0 | 4.73e-01 | 77.1% | 98.3% |
| 3479537 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 40.0 | 4.64e-01 | 75.0% | 100.0% |
| 5049371 | 11.1.1.575 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF6941 | 0.57 | 42.0 | 4.49e-01 | 76.4% | 90.3% |
D3
high
residues 731-820
D4
medium
residues 164-321
Domain cluster:
rep: uncharacterized_glycosyltransferase__YP_003986689__Acanthamoeba_polyphaga_mimivirus__212035__D412-579
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00534.27 best | Glycos_transf_1 | 42.3 | 8.40e-11 | 96.8% | 83.7% |
| PF13692.13 | Glyco_trans_1_4 | 37.2 | 4.80e-09 | 89.9% | 74.5% |
D5
medium
residues 470-482_495-536
Domain cluster:
representative