LacPavin_0818_WC55_scaffold_113784_prodigal-single.1XX__00018

Bact-Vir

LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00018

Identity

56.9 mean pLDDT

Singleton — not in a non-trivial cluster

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-56

PDB

D2 medium residues 178-264

PDB

D3 medium residues 265-346_509-548

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2l66A00	2.10.260.10	Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D ›	0.51	20.0	2.86e-01	82.0%	75.5%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3516458	325.1.8.0 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein	0.59	28.0	3.75e-01	88.5%	88.3%
3790843	325.1.8.2 ↗	a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Ribosomal L27 protein › ECR1_N	0.58	28.0	3.81e-01	91.0%	93.3%
3282819	1.1.16.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD	0.57	37.0	3.55e-01	90.2%	55.7%
3286366	1.1.16.1 ↗	beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD	0.56	36.0	3.52e-01	91.8%	58.5%
5037577	4961.1.1.1 ↗	a+b complex topology › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › inserted a+b domain in yeast RNA polymerase beta subunit › RNA_pol_Rpb2_4	0.52	29.0	3.19e-01	75.4%	66.3%
4582465	220.1.1.1 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › PH	0.51	34.0	3.55e-01	95.9%	74.5%
4027954	3121.1.1.0 ↗	a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain	0.50	35.0	3.94e-01	84.4%	95.6%

D4 medium residues 347-398

PDB

Domain cluster: representative

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6cfcA01	1.10.530.10	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.63	50.0	3.64e-01	92.3%	60.9%

D5 medium residues 399-456

PDB

D6 medium residues 457-497_549-597

PDB

Domain cluster: representative

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1wjjA01	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.56	33.0	3.16e-01	92.2%	47.3%
2fpnA02	3.30.360.40	Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › YwmB-like	0.54	28.0	3.13e-01	90.0%	63.1%