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LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00047

Bact-Vir

LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00047

Identity

Kingdom:
phage

Quality

91.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 98-146
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bbyB04 3.30.70.3450 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 36.0 2.81e-01 75.5% 26.0%
1cnzA00 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.58 47.0 2.92e-01 100.0% 64.2%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3329054 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.62 45.0 3.31e-01 87.8% 30.4%
D2 medium residues 6-42
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13450.13 best NAD_binding_8 39.9 5.80e-10 94.6% 51.5%
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1i8tA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.97 89.0 5.41e-01 100.0% 19.5%
3ka7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.97 88.0 5.29e-01 100.0% 17.4%
2bi7A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.96 88.0 5.32e-01 100.0% 18.4%
3kkjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.96 88.0 5.61e-01 100.0% 24.2%
3llvA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.95 77.0 5.11e-01 89.2% 25.0%
2v3aA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.94 86.0 5.63e-01 100.0% 27.4%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.94 85.0 5.73e-01 100.0% 29.8%
4m52A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.94 86.0 5.78e-01 100.0% 30.6%
3ng7X01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.93 83.0 5.00e-01 100.0% 16.7%
2r9zA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.93 85.0 5.76e-01 100.0% 31.4%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.93 85.0 5.75e-01 100.0% 30.6%
2yg5A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.93 86.0 5.23e-01 100.0% 29.0%
6cmzA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.93 84.0 5.72e-01 100.0% 31.1%
3fg2P02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.93 84.0 5.61e-01 100.0% 30.2%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.93 82.0 4.84e-01 100.0% 14.4%
6qkgA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.92 80.0 5.57e-01 100.0% 32.4%
3dmeA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.92 83.0 5.01e-01 100.0% 18.3%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.92 83.0 5.65e-01 100.0% 31.6%
2ivdB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.91 82.0 5.19e-01 100.0% 23.2%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.91 80.0 5.20e-01 100.0% 24.5%
1j4aA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.91 74.0 4.54e-01 89.2% 16.8%
3oc4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.90 79.0 5.45e-01 100.0% 30.8%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.90 79.0 5.31e-01 100.0% 28.2%
3kd9A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.90 80.0 4.73e-01 100.0% 14.9%
8ajjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.90 82.0 5.60e-01 100.0% 32.5%
4gx0B04 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.90 75.0 4.98e-01 91.9% 26.0%
1dxyA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.89 73.0 4.46e-01 89.2% 16.8%
4fflA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.89 73.0 5.35e-01 91.9% 37.2%
5u25A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.89 78.0 5.37e-01 100.0% 30.3%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.89 78.0 5.29e-01 100.0% 29.3%
5x1yA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.88 79.0 5.37e-01 100.0% 30.3%
3l9wA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.87 72.0 4.59e-01 91.9% 22.7%
3kljA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.87 75.0 5.35e-01 100.0% 33.6%
1d5tA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.87 75.0 4.79e-01 100.0% 21.7%
3gg9A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.86 70.0 4.30e-01 89.2% 17.7%
1id1A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.85 73.0 4.72e-01 94.6% 48.4%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.85 73.0 5.13e-01 100.0% 31.4%
1pjqA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.84 66.0 4.69e-01 91.9% 29.5%
7u35A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.83 66.0 4.99e-01 91.9% 39.1%
1xdiA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.82 74.0 5.08e-01 100.0% 31.1%
2x5oA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.82 67.0 5.04e-01 94.6% 38.0%
3ic9A03 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.82 66.0 4.65e-01 100.0% 28.7%
5ygqA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.81 68.0 4.68e-01 100.0% 28.7%
1kjnA00 3.40.50.10160 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MTH777-like 0.81 64.0 4.26e-01 91.9% 30.3%
3aimA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.81 61.0 3.58e-01 83.8% 12.7%
3wnvA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.81 65.0 4.10e-01 91.9% 20.0%
1b6sA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.80 58.0 4.76e-01 81.1% 42.9%
4lflA00 3.40.1400.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribose 5-phosphate Isomerase B; Chain: A, › Sugar-phosphate isomerase, RpiB/LacA/LacB 0.78 63.0 4.14e-01 89.2% 23.9%
3kzwA02 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.77 56.0 3.25e-01 81.1% 9.7%
2bkwA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.77 66.0 3.93e-01 97.3% 23.8%
2vvpC00 3.40.1400.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribose 5-phosphate Isomerase B; Chain: A, › Sugar-phosphate isomerase, RpiB/LacA/LacB 0.75 66.0 4.29e-01 100.0% 23.4%
4lflB00 3.40.1400.10 Alpha Beta › 3-Layer(aba) Sandwich › Ribose 5-phosphate Isomerase B; Chain: A, › Sugar-phosphate isomerase, RpiB/LacA/LacB 0.74 64.0 4.08e-01 97.3% 20.9%
2r0cA03 3.40.30.120 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.74 53.0 3.81e-01 81.1% 27.6%
2abqA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.73 62.0 3.66e-01 100.0% 28.9%
3vpbA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.73 61.0 4.37e-01 91.9% 36.6%
5k2mA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.73 61.0 4.41e-01 91.9% 38.5%
1dgmA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.71 52.0 3.11e-01 81.1% 11.2%
3umoA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.71 58.0 3.46e-01 100.0% 35.0%
3ie7A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.71 59.0 3.49e-01 100.0% 29.4%
3b7wA01 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.71 58.0 3.33e-01 100.0% 41.9%
3ffrA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.70 57.0 3.49e-01 97.3% 23.5%
2nwhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.70 53.0 3.18e-01 91.9% 12.7%
3f0hA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.70 57.0 3.44e-01 97.3% 22.6%
4jedA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.69 55.0 4.19e-01 97.3% 89.8%
1gwcA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.68 48.0 3.95e-01 81.1% 40.0%
5d6nA00 3.40.50.12780 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain 0.68 53.0 3.01e-01 97.3% 36.0%
1iugA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.67 55.0 3.42e-01 100.0% 23.6%
6pd1C02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.66 55.0 3.37e-01 100.0% 24.3%
3agkA03 3.30.1330.30 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 0.66 48.0 3.73e-01 78.4% 31.2%
1fzrA00 3.40.91.30 Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › 0.63 48.0 3.54e-01 100.0% 31.0%
5is2A03 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.61 47.0 2.97e-01 89.2% 47.3%
5uh0A02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.60 41.0 3.32e-01 81.1% 35.5%
3luaA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 44.0 3.18e-01 81.1% 24.8%
2xmzA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 44.0 2.71e-01 100.0% 72.9%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4975199 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.99 93.0 5.58e-01 100.0% 18.6%
4858501 2003.1.2.59 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA, NAD_binding_8 0.98 91.0 6.51e-01 100.0% 39.8%
2644340 2003.1.2.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.97 89.0 6.14e-01 100.0% 33.6%
4986760 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.97 89.0 5.67e-01 100.0% 24.8%
4969236 2003.1.2.298 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Fer4_7 0.97 89.0 5.16e-01 100.0% 14.2%
4986116 2002.1.1.165 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › FAD_oxidored 0.97 88.0 5.24e-01 100.0% 16.5%
3288575 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.96 88.0 4.86e-01 100.0% 8.4%
4939691 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.96 88.0 5.32e-01 100.0% 18.5%
4882064 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.96 88.0 4.94e-01 100.0% 10.9%
3685043 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.96 88.0 5.37e-01 100.0% 19.5%
3587517 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.96 89.0 5.70e-01 100.0% 25.5%
3620978 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.96 87.0 4.97e-01 100.0% 11.6%
3626380 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.95 87.0 4.77e-01 100.0% 8.4%
2905233 2003.1.2.40 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_oxidored 0.95 86.0 5.18e-01 100.0% 17.8%
3812068 2003.1.2.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like 0.95 86.0 5.40e-01 100.0% 61.3%
4996885 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.94 85.0 5.38e-01 100.0% 23.0%
4878518 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.94 85.0 5.51e-01 100.0% 25.2%
2165986 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.94 84.0 5.40e-01 100.0% 23.7%
1270403 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.94 85.0 5.73e-01 100.0% 29.8%
1572580 244.1.1.6 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › Amino_oxidase 0.94 83.0 4.85e-01 100.0% 13.4%
2141537 2003.1.2.11 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.93 68.0 7.08e-01 78.4% 85.3%
1843849 2003.1.2.102 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Pyr_redox_2 0.93 72.0 7.50e-01 86.5% 91.2%
1323525 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.93 82.0 4.89e-01 100.0% 15.8%
2989513 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.93 84.0 4.86e-01 100.0% 13.4%
3957285 2003.1.2.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.93 83.0 5.09e-01 100.0% 19.5%
3962341 2003.1.3.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain 0.93 83.0 5.14e-01 100.0% 39.5%
3736481 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.93 84.0 5.69e-01 100.0% 64.2%
4812142 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.93 83.0 7.74e-01 100.0% 84.4%
9289 2003.1.2.20 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › HI0933_like 0.93 83.0 5.10e-01 100.0% 19.3%
3988031 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.93 83.0 5.30e-01 100.0% 23.1%
1149286 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.92 84.0 5.10e-01 100.0% 18.6%
181370 2003.1.2.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.92 83.0 5.47e-01 100.0% 58.1%
3427497 2003.1.2.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.92 83.0 5.65e-01 100.0% 30.8%
3361836 2003.1.2.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI 0.92 81.0 5.12e-01 100.0% 21.1%
5064034 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.91 81.0 5.44e-01 100.0% 28.5%
2605262 2003.1.2.6 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 0.91 81.0 5.35e-01 100.0% 56.6%
161181 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.91 80.0 5.47e-01 100.0% 30.3%
3957350 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.91 80.0 5.07e-01 100.0% 44.1%
2101003 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.91 82.0 6.25e-01 100.0% 46.8%
4284790 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.91 80.0 5.30e-01 100.0% 26.4%
3678875 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.91 80.0 5.29e-01 100.0% 26.4%
2095015 2003.1.2.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.91 81.0 4.75e-01 100.0% 14.5%
4837038 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.90 79.0 5.89e-01 100.0% 41.6%
368907 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.90 75.0 5.19e-01 100.0% 29.4%
1269846 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.90 78.0 4.79e-01 100.0% 18.3%
None 0.90 82.0 5.88e-01 100.0% 39.6%
3282467 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.89 79.0 5.38e-01 100.0% 29.6%
3695003 2003.1.2.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI 0.89 79.0 5.05e-01 100.0% 23.7%
4930416 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.89 72.0 4.82e-01 89.2% 26.2%
1164971 2003.1.2.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI 0.89 78.0 5.70e-01 100.0% 39.6%
5008277 2003.1.1.27 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › PDH_N 0.89 72.0 4.72e-01 89.2% 22.8%
3460118 2003.1.2.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI 0.89 78.0 4.53e-01 100.0% 13.0%
2875748 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.89 77.0 4.80e-01 100.0% 18.9%
5079381 2003.1.3.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_binding_3 0.89 79.0 4.63e-01 100.0% 35.2%
2163989 2003.1.2.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.89 78.0 5.81e-01 100.0% 42.2%
1117568 2003.1.2.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI 0.89 77.0 4.42e-01 100.0% 77.3%
5070285 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.88 72.0 4.92e-01 91.9% 28.8%
4841990 2003.1.2.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.88 77.0 5.45e-01 100.0% 35.5%
3584784 2003.1.2.9 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GDI 0.88 77.0 4.50e-01 100.0% 13.3%
4826000 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.87 80.0 5.98e-01 100.0% 45.1%
1851733 2003.1.2.12 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO 0.87 78.0 5.71e-01 100.0% 40.9%
1138111 2003.1.2.49 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 0.87 80.0 5.05e-01 100.0% 56.0%
3325484 2003.1.1.307 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GDI 0.87 77.0 5.06e-01 100.0% 25.7%
5061123 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.87 76.0 5.14e-01 100.0% 28.5%
4314983 2003.1.8.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N 0.86 72.0 5.45e-01 94.6% 41.2%
4682816 2003.1.8.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N 0.86 69.0 5.04e-01 91.9% 35.0%
2073980 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.85 76.0 4.85e-01 100.0% 55.7%
3359205 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.85 78.0 5.07e-01 100.0% 26.9%
3728267 244.1.1.35 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › NAD_binding_8 0.84 78.0 5.00e-01 100.0% 50.0%
4935187 2003.1.1.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › TrkA_N 0.84 73.0 4.84e-01 97.3% 49.3%
5066003 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.84 69.0 4.84e-01 91.9% 32.2%
4017743 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.83 68.0 5.25e-01 100.0% 42.5%
3957004 2003.1.10.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › RS_preATP-grasp-like 0.81 64.0 4.74e-01 91.9% 34.0%
4382452 2003.1.8.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N 0.81 65.0 4.97e-01 94.6% 40.0%
1123011 7560.1.1.1 a/b three-layered sandwiches › Ribose/Galactose isomerase RpiB/AlsB › Ribose/Galactose isomerase RpiB/AlsB › Ribose/Galactose isomerase RpiB/AlsB › LacAB_rpiB 0.78 62.0 4.13e-01 89.2% 23.9%
3671803 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.78 56.0 4.76e-01 81.1% 50.8%
3607612 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.77 56.0 4.64e-01 81.1% 45.7%
10592 7560.1.1.1 a/b three-layered sandwiches › Ribose/Galactose isomerase RpiB/AlsB › Ribose/Galactose isomerase RpiB/AlsB › Ribose/Galactose isomerase RpiB/AlsB › LacAB_rpiB 0.77 67.0 4.31e-01 97.3% 23.1%
3720419 2003.1.8.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › FMO-like 0.76 58.0 4.91e-01 100.0% 48.6%
3165324 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.76 56.0 4.64e-01 83.8% 44.3%
4935935 2485.1.1.3 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Glutaredoxin 0.76 54.0 4.25e-01 81.1% 38.8%
3944752 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.73 62.0 4.21e-01 97.3% 39.2%
1905944 2003.1.10.23 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain › LysX_preATP_grasp 0.73 61.0 4.62e-01 91.9% 45.1%
369252 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.71 59.0 3.49e-01 100.0% 29.4%
4057366 2007.1.4.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.69 52.0 4.22e-01 89.2% 42.5%
3591904 2485.1.1.40 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_3 0.67 47.0 3.41e-01 81.1% 26.4%
None 0.66 55.0 3.37e-01 97.3% 20.4%
3376359 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.65 48.0 3.14e-01 91.9% 18.5%
4339084 7591.1.1.1 a/b three-layered sandwiches › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › Tetraacyldisaccharide 4'-kinase C-terminal domain › LpxK 0.56 43.0 3.26e-01 81.1% 28.6%
D3 medium residues 47-80
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3996820 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.57 39.0 2.98e-01 73.5% 30.0%