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LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00196
Bact-VirLacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00196
Identity
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-101
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7vzrc01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.87 | 72.0 | 5.80e-01 | 100.0% | 49.6% |
| 7vzgC01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.84 | 73.0 | 5.45e-01 | 100.0% | 40.9% |
| 6tp9G01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.79 | 61.0 | 5.80e-01 | 100.0% | 71.8% |
| 4kmgA00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.63 | 51.0 | 4.78e-01 | 100.0% | 71.6% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2773765 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.90 | 77.0 | 6.62e-01 | 100.0% | 61.0% |
| 2157193 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.90 | 78.0 | 7.17e-01 | 100.0% | 74.7% |
| 2800076 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.89 | 76.0 | 7.12e-01 | 100.0% | 75.3% |
| 4826637 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.87 | 72.0 | 7.00e-01 | 100.0% | 81.9% |
| 2168134 | 107.1.1.0 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c | 0.86 | 76.0 | 6.95e-01 | 100.0% | 74.4% |
| 2171201 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.85 | 76.0 | 6.93e-01 | 100.0% | 75.3% |
| 4826638 | 107.1.1.1 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrom_C | 0.84 | 73.0 | 6.56e-01 | 100.0% | 70.0% |
| 3967693 | 107.1.1.9 ↗ | alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3 | 0.74 | 60.0 | 5.10e-01 | 100.0% | 54.5% |
| 2388265 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.58 | 44.0 | 4.33e-01 | 95.5% | 76.7% |
| 4025009 | 650.1.1.0 ↗ | alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain | 0.58 | 32.0 | 3.01e-01 | 98.5% | 43.5% |
| 3191352 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 42.0 | 2.74e-01 | 92.5% | 57.5% |
| 3633937 | 3691.1.1.1 ↗ | alpha arrays › Phosphomannose isomerase helical insertion domain › Phosphomannose isomerase helical insertion domain › Phosphomannose isomerase helical insertion domain › PMI_typeI_hel | 0.50 | 39.0 | 3.41e-01 | 92.5% | 94.2% |