←Back to structures

LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00250

Bact-Vir

LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00250

Identity

Kingdom:
phage

Quality

74.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-116
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jxtA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.59 30.0 3.49e-01 75.7% 67.1%
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.52 37.0 4.23e-01 97.3% 100.0%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4969863 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.61 31.0 3.67e-01 76.6% 69.3%
3969663 11.2.1.5 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › IcmF_C 0.50 32.0 3.31e-01 100.0% 65.5%
3930185 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 34.0 3.35e-01 91.0% 63.3%