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LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00270
Bact-VirLacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00270
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-91
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4csqA00 | 2.30.29.190 | Mainly Beta › Roll › PH-domain like › | 0.76 | 68.0 | 6.31e-01 | 98.9% | 88.5% |
| 2yf0A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 49.0 | 4.95e-01 | 87.6% | 82.8% |
| 5xbfA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 46.0 | 4.65e-01 | 87.6% | 79.5% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 45.0 | 4.28e-01 | 87.6% | 63.9% |
| 1mi1A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 51.0 | 4.88e-01 | 91.0% | 85.7% |
| 1plsA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 50.0 | 4.66e-01 | 91.0% | 69.9% |
| 2rloA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 52.0 | 4.57e-01 | 92.1% | 81.2% |
| 1q67A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 4.27e-01 | 88.8% | 77.1% |
| 5j3tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 49.0 | 4.41e-01 | 88.8% | 65.9% |
| 2nysA00 | 2.30.30.220 | Mainly Beta › Roll › SH3 type barrels. › SspB-like | 0.59 | 49.0 | 4.50e-01 | 91.0% | 90.6% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 39.0 | 4.37e-01 | 92.1% | 96.8% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 52.0 | 4.86e-01 | 98.9% | 79.1% |
| 4zgfA00 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 49.0 | 4.28e-01 | 95.5% | 97.9% |
| 2lydA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 46.0 | 4.02e-01 | 87.6% | 65.7% |
| 1j0wB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 45.0 | 4.33e-01 | 87.6% | 83.5% |
| 4aghA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.56 | 33.0 | 3.46e-01 | 78.7% | 62.5% |
| 4gp0B02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.55 | 46.0 | 4.11e-01 | 91.0% | 96.7% |
| 2vifA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.55 | 47.0 | 4.21e-01 | 94.4% | 96.8% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.55 | 37.0 | 4.05e-01 | 78.7% | 88.7% |
| 2izvA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.54 | 49.0 | 4.01e-01 | 100.0% | 66.3% |
| 2i9yA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 47.0 | 3.93e-01 | 97.8% | 86.0% |
| 1smpI00 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 47.0 | 4.59e-01 | 100.0% | 98.0% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.54 | 47.0 | 4.57e-01 | 100.0% | 93.0% |
| 3cyjA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 37.0 | 3.34e-01 | 70.8% | 82.0% |
| 7mhwA01 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 45.0 | 4.59e-01 | 96.6% | 100.0% |
| 6i18A04 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.53 | 40.0 | 3.81e-01 | 80.9% | 100.0% |
| 1wosA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.53 | 37.0 | 3.80e-01 | 87.6% | 75.6% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 46.0 | 4.25e-01 | 100.0% | 80.2% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.53 | 45.0 | 3.92e-01 | 98.9% | 93.2% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.53 | 33.0 | 3.65e-01 | 97.8% | 83.3% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 37.0 | 3.75e-01 | 74.2% | 79.1% |
| 3nemA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 38.0 | 3.60e-01 | 76.4% | 77.1% |
| 3oe3C00 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.52 | 41.0 | 4.20e-01 | 87.6% | 100.0% |
| 2fokA03 | 3.40.91.30 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.51 | 45.0 | 3.68e-01 | 100.0% | 79.4% |
| 2epbA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 31.0 | 3.35e-01 | 76.4% | 75.0% |
| 2d0bA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.51 | 33.0 | 3.33e-01 | 97.8% | 65.2% |
| 6l4qB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 39.0 | 3.49e-01 | 85.4% | 89.6% |
| 3t2lA02 | 2.60.40.2630 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 40.0 | 3.41e-01 | 85.4% | 87.7% |
| 2m3xC02 | 2.40.10.360 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.50 | 33.0 | 3.67e-01 | 98.9% | 87.0% |
| 2eo6A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.50 | 41.0 | 3.88e-01 | 88.8% | 98.1% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 34.0 | 3.73e-01 | 97.8% | 92.5% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1291133 | 220.6.1.1 ↗ | beta barrels › PH domain-like › Uncharacterized protein PA3793 › Uncharacterized protein PA3793 › DUF5629 | 0.76 | 68.0 | 6.31e-01 | 98.9% | 88.5% |
| 3926363 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 54.0 | 4.93e-01 | 87.6% | 63.5% |
| 3407758 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.70 | 53.0 | 4.85e-01 | 87.6% | 62.6% |
| 3264236 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.69 | 52.0 | 5.05e-01 | 87.6% | 71.0% |
| 3939076 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.69 | 48.0 | 4.63e-01 | 87.6% | 64.0% |
| 3513280 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.67 | 46.0 | 4.47e-01 | 87.6% | 64.0% |
| 3414272 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.66 | 51.0 | 5.06e-01 | 87.6% | 77.9% |
| 3250597 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.66 | 51.0 | 4.77e-01 | 87.6% | 67.3% |
| 3480535 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 51.0 | 4.89e-01 | 91.0% | 71.4% |
| 4957336 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 49.0 | 3.17e-01 | 83.1% | 17.5% |
| 5081361 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 51.0 | 4.92e-01 | 87.6% | 74.0% |
| 4004179 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.65 | 47.0 | 3.49e-01 | 87.6% | 29.6% |
| 3198727 | 220.1.1.121 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 | 0.64 | 52.0 | 4.70e-01 | 88.8% | 65.0% |
| 4973804 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 42.0 | 4.51e-01 | 74.2% | 78.7% |
| 3208784 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.63 | 50.0 | 4.19e-01 | 87.6% | 75.0% |
| 167402 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.63 | 49.0 | 4.49e-01 | 87.6% | 62.8% |
| 3630302 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.62 | 47.0 | 4.42e-01 | 87.6% | 65.5% |
| 3501905 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.62 | 52.0 | 4.99e-01 | 94.4% | 81.0% |
| 3507234 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.62 | 47.0 | 4.39e-01 | 87.6% | 65.5% |
| 3475799 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.62 | 49.0 | 4.42e-01 | 87.6% | 62.4% |
| 4019054 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.62 | 50.0 | 4.16e-01 | 91.0% | 68.5% |
| 3175878 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 49.0 | 4.09e-01 | 87.6% | 49.7% |
| 3937216 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.61 | 49.0 | 4.38e-01 | 88.8% | 63.8% |
| 5032977 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 45.0 | 4.72e-01 | 94.4% | 86.3% |
| 3790351 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.61 | 48.0 | 4.42e-01 | 87.6% | 73.3% |
| 4208229 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.60 | 32.0 | 3.98e-01 | 87.6% | 90.0% |
| 3515993 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.60 | 49.0 | 4.45e-01 | 88.8% | 70.0% |
| 5071919 | 220.1.1.320 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Zn_Ribbon_1 | 0.60 | 47.0 | 4.12e-01 | 92.1% | 54.3% |
| 4034521 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.60 | 46.0 | 4.53e-01 | 87.6% | 75.0% |
| 3628889 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.60 | 49.0 | 3.42e-01 | 95.5% | 27.0% |
| 4093923 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 34.0 | 4.06e-01 | 91.0% | 87.3% |
| 3508939 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.60 | 48.0 | 4.26e-01 | 87.6% | 63.1% |
| 3655242 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.60 | 48.0 | 4.07e-01 | 91.0% | 65.6% |
| 4947834 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 47.0 | 4.47e-01 | 88.8% | 72.4% |
| 3288866 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 53.0 | 4.80e-01 | 98.9% | 78.3% |
| 5047735 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 48.0 | 4.09e-01 | 92.1% | 53.0% |
| 4978405 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 47.0 | 4.15e-01 | 92.1% | 58.2% |
| 3181029 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.59 | 47.0 | 3.93e-01 | 88.8% | 67.9% |
| 17 | 1.1.1.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Zn_protease | 0.59 | 42.0 | 3.77e-01 | 75.3% | 53.2% |
| 3648024 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.58 | 48.0 | 4.37e-01 | 92.1% | 68.0% |
| 3233686 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.58 | 46.0 | 4.00e-01 | 87.6% | 61.4% |
| 3520640 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 50.0 | 3.94e-01 | 95.5% | 45.4% |
| 4950140 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.58 | 48.0 | 4.44e-01 | 91.0% | 99.1% |
| 3876027 | 220.1.1.13 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 | 0.58 | 47.0 | 4.05e-01 | 91.0% | 56.0% |
| 5035745 | 2.1.1.123 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 | 0.56 | 40.0 | 3.81e-01 | 74.2% | 79.0% |
| 3236058 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.56 | 40.0 | 4.08e-01 | 94.4% | 76.5% |
| 3854886 | 9.13.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › AOC barrel-like › AOC barrel-like | 0.56 | 40.0 | 3.98e-01 | 75.3% | 90.5% |
| 3400395 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 49.0 | 4.45e-01 | 94.4% | 78.3% |
| 4064637 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 39.0 | 3.36e-01 | 74.2% | 57.2% |
| 3842631 | 4.1.1.243 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa | 0.55 | 34.0 | 3.76e-01 | 86.5% | 78.6% |
| 4974740 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 46.0 | 4.22e-01 | 94.4% | 79.7% |
| 167520 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.55 | 48.0 | 4.33e-01 | 100.0% | 95.3% |
| 3523802 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 33.0 | 3.93e-01 | 86.5% | 91.7% |
| 4949772 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 45.0 | 4.25e-01 | 89.9% | 92.4% |
| 3571716 | 2.1.1.188 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSDE1 | 0.54 | 39.0 | 3.92e-01 | 77.5% | 95.6% |
| 5004622 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.54 | 48.0 | 4.30e-01 | 100.0% | 94.4% |
| 5044987 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 35.0 | 3.41e-01 | 92.1% | 58.1% |
| 4948950 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.53 | 39.0 | 3.84e-01 | 79.8% | 100.0% |
| 3701168 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 35.0 | 3.30e-01 | 70.8% | 93.9% |
| 3628862 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 38.0 | 2.91e-01 | 82.0% | 52.0% |
| 4468497 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.50 | 37.0 | 3.62e-01 | 82.0% | 98.1% |
| 3490002 | 9.15.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD | 0.50 | 41.0 | 3.49e-01 | 97.8% | 72.5% |