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LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00273

Bact-Vir

LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00273

Identity

Kingdom:
phage

Quality

77.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-93
PDB
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v8qA01 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.66 38.0 3.87e-01 83.0% 57.3%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.65 48.0 4.62e-01 95.5% 68.7%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.65 38.0 3.81e-01 81.8% 56.7%
3tfzB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 43.0 3.48e-01 73.9% 52.7%
3qszA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 43.0 3.39e-01 85.2% 36.7%
1ul7A00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.60 36.0 3.48e-01 83.0% 52.0%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 42.0 4.54e-01 83.0% 84.2%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.59 33.0 3.87e-01 100.0% 80.0%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 45.0 4.06e-01 83.0% 88.3%
1vprA03 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 39.0 3.23e-01 86.4% 39.5%
2d4rA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 43.0 3.59e-01 79.5% 58.2%
4c57B00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.56 49.0 3.43e-01 98.9% 62.7%
3ovcA01 3.30.200.150 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.56 41.0 4.49e-01 85.2% 94.4%
4ec6A00 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 4.05e-01 85.2% 93.6%
4o38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 45.0 4.38e-01 89.8% 100.0%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.54 40.0 3.86e-01 86.4% 70.4%
1m2xA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.53 41.0 3.09e-01 83.0% 92.7%
1s9iB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 43.0 4.29e-01 87.5% 91.4%
3w15A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 43.0 2.93e-01 90.9% 26.3%
2owpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 40.0 3.56e-01 83.0% 84.5%
2pmlX01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 3.60e-01 83.0% 79.0%
1dwnA00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.52 35.0 3.11e-01 83.0% 48.0%
4eqmA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 40.0 3.99e-01 83.0% 96.6%
4crsA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 41.0 3.60e-01 88.6% 76.9%
6td3B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.51 41.0 3.93e-01 87.5% 93.2%
6w0pB01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.51 44.0 3.12e-01 98.9% 37.0%
3lltA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 39.0 3.88e-01 84.1% 91.4%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.50 41.0 3.54e-01 90.9% 79.5%
3fljA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 39.0 3.33e-01 83.0% 69.5%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3472948 9.1.1.49 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 0.65 57.0 4.94e-01 95.5% 66.2%
2755883 331.19.1.1 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin 0.62 38.0 3.78e-01 83.0% 58.7%
2841932 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.58 39.0 3.45e-01 81.8% 48.4%
3932376 206.1.2.4 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin 0.57 49.0 3.11e-01 95.5% 94.0%
None 0.56 44.0 3.02e-01 84.1% 27.5%
3611951 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.56 49.0 3.69e-01 97.7% 86.7%
3788691 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 48.0 3.36e-01 100.0% 56.8%
4243906 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 47.0 3.28e-01 98.9% 68.4%
3871111 206.1.1.262 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Mad3_BUB1_I 0.54 49.0 2.96e-01 100.0% 23.0%
3781119 5.1.4.97 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rrn6_beta-prop 0.54 46.0 2.96e-01 95.5% 33.3%
3558947 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 47.0 3.28e-01 100.0% 62.7%
3238811 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.53 41.0 2.80e-01 88.6% 23.5%
3709351 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.52 44.0 2.93e-01 94.3% 62.3%
3289896 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 42.0 2.50e-01 90.9% 18.0%
4951174 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 45.0 3.18e-01 100.0% 53.9%
None 0.50 43.0 3.07e-01 95.5% 74.6%
3516548 206.1.1.20 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.50 41.0 3.41e-01 92.0% 78.2%
3937930 206.1.1.10 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase 0.50 44.0 2.90e-01 98.9% 67.4%
2714027 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.50 43.0 3.08e-01 95.5% 59.6%
3952733 5.1.8.10 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › Peptidase_S9_N 0.50 44.0 3.31e-01 100.0% 55.1%
3472687 331.3.1.3 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › START 0.50 44.0 3.20e-01 98.9% 74.5%
3221683 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.50 43.0 3.78e-01 94.3% 83.8%
D2 medium residues 137-208
PDB
CATH (79)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ulyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 67.0 6.19e-01 83.3% 71.9%
1bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 60.0 5.36e-01 83.3% 56.8%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 61.0 6.23e-01 79.2% 90.0%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 64.0 5.82e-01 81.9% 69.2%
4g6qA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 6.40e-01 90.3% 75.9%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 63.0 6.04e-01 81.9% 75.6%
2p4wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 65.0 5.73e-01 86.1% 80.6%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 4.93e-01 83.3% 44.4%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 5.71e-01 87.5% 67.0%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 65.0 5.08e-01 87.5% 51.7%
2fswA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 5.45e-01 83.3% 58.8%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 62.0 5.70e-01 83.3% 80.0%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 63.0 5.94e-01 86.1% 71.8%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 60.0 6.13e-01 83.3% 81.7%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 61.0 5.65e-01 81.9% 68.2%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 60.0 6.29e-01 81.9% 92.4%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.70e-01 87.5% 64.3%
6kf9G01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 6.14e-01 88.9% 78.0%
3df8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 59.0 5.09e-01 83.3% 53.2%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 61.0 5.80e-01 87.5% 71.4%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 5.29e-01 83.3% 60.0%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 5.57e-01 83.3% 78.0%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 5.68e-01 87.5% 76.0%
2mlgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 6.09e-01 86.1% 83.1%
1z7uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 5.42e-01 87.5% 60.0%
4mqvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 59.0 6.17e-01 81.9% 89.2%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 61.0 5.20e-01 86.1% 64.3%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 5.43e-01 87.5% 68.9%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 6.18e-01 86.1% 89.3%
1lj9B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 62.0 4.88e-01 87.5% 44.4%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 69.0 6.02e-01 98.6% 76.9%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 6.03e-01 80.6% 92.2%
4kt5C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 5.63e-01 87.5% 80.7%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 4.85e-01 87.5% 48.5%
1jgsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 61.0 4.85e-01 87.5% 45.7%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 56.0 5.55e-01 86.1% 76.6%
3c18A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 6.04e-01 77.8% 100.0%
2gxgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 60.0 4.75e-01 87.5% 46.4%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 5.69e-01 87.5% 81.0%
4gcvC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 4.55e-01 87.5% 42.6%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 6.09e-01 87.5% 88.7%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 60.0 4.62e-01 87.5% 42.0%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 59.0 5.20e-01 87.5% 70.9%
1xmkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.77e-01 87.5% 79.7%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 5.28e-01 84.7% 70.6%
5xnsC00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.71 54.0 5.52e-01 80.6% 88.6%
5c17A00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.71 60.0 4.24e-01 91.7% 68.4%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 4.44e-01 86.1% 46.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 5.51e-01 80.6% 95.2%
7dklA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 4.82e-01 90.3% 76.3%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 4.48e-01 84.7% 64.2%
1cf7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 5.20e-01 80.6% 85.1%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 52.0 4.97e-01 84.7% 85.5%
2mbfA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 4.97e-01 90.3% 89.7%
4yo2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 52.0 5.25e-01 87.5% 85.9%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 5.36e-01 87.5% 92.3%
1v3fA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 53.0 4.46e-01 88.9% 80.0%
7dklA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.49e-01 79.2% 88.9%
4cgyA04 1.10.290.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 4 › Topoisomerase I, domain 4 0.64 47.0 3.92e-01 77.8% 79.2%
2bgcA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.44e-01 83.3% 69.3%
1jhfA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 5.07e-01 87.5% 88.4%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.63 48.0 4.60e-01 83.3% 85.9%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 50.0 4.30e-01 87.5% 63.5%
4clfA02 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.61 41.0 3.11e-01 70.8% 73.9%
7ewfA01 1.25.40.990 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.60 48.0 3.40e-01 90.3% 30.3%
3tqnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 48.0 4.83e-01 86.1% 84.9%
6n9gA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 48.0 4.38e-01 90.3% 88.0%
2pbiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 48.0 4.31e-01 90.3% 84.6%
4hlyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 43.0 3.85e-01 80.6% 94.3%
7dl8C01 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.55 42.0 3.94e-01 84.7% 74.2%
2kvvA00 1.10.1660.60 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Putative excisionased domain DUF1233 0.54 39.0 3.83e-01 77.8% 74.4%
3q87B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 38.0 3.00e-01 75.0% 90.2%
3juwA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 38.0 2.93e-01 73.6% 92.8%
3mwbA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.52 37.0 3.49e-01 79.2% 100.0%
5oyhD00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.51 35.0 2.71e-01 72.2% 69.2%
1ug8A00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.51 43.0 4.10e-01 97.2% 81.6%
5iduC02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.51 39.0 3.44e-01 83.3% 85.2%
2lxrA00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.51 36.0 3.56e-01 81.9% 71.1%
2hnkA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 38.0 2.76e-01 84.7% 31.4%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5027342 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.90 72.0 6.50e-01 84.7% 75.8%
4999546 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.89 71.0 6.34e-01 83.3% 74.7%
4547759 101.1.2.21 alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress 0.88 68.0 6.97e-01 81.9% 88.6%
4304354 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.87 68.0 6.88e-01 81.9% 92.9%
4978855 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.87 68.0 5.65e-01 83.3% 59.2%
3281274 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.86 66.0 6.36e-01 80.6% 80.0%
5045752 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.86 68.0 4.84e-01 83.3% 33.8%
3279209 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.86 68.0 4.96e-01 83.3% 41.1%
4927944 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 69.0 6.13e-01 86.1% 83.0%
4983791 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.85 70.0 5.64e-01 87.5% 55.4%
3286277 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.85 67.0 4.88e-01 83.3% 41.7%
5076520 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 70.0 6.18e-01 87.5% 72.0%
4972754 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.85 68.0 4.86e-01 84.7% 71.1%
2703 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.85 67.0 4.79e-01 83.3% 33.7%
3286028 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.85 70.0 6.94e-01 87.5% 86.7%
4929803 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.85 67.0 4.89e-01 84.7% 71.2%
4976186 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.84 70.0 5.29e-01 87.5% 49.0%
4950547 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.84 67.0 6.01e-01 83.3% 68.4%
4930418 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.84 69.0 6.23e-01 87.5% 74.7%
3285723 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.84 66.0 4.86e-01 83.3% 42.9%
4971464 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.84 66.0 5.56e-01 83.3% 55.7%
3282515 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.84 69.0 5.07e-01 87.5% 36.6%
5062023 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 71.0 5.97e-01 90.3% 78.3%
3280466 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.84 66.0 4.74e-01 83.3% 37.4%
4965008 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.84 67.0 5.83e-01 84.7% 62.9%
5030563 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 66.0 5.94e-01 83.3% 63.2%
3286725 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.83 69.0 4.96e-01 87.5% 41.6%
4931494 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.83 67.0 6.08e-01 86.1% 85.3%
3278037 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.83 69.0 4.88e-01 87.5% 39.5%
4957330 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.83 68.0 5.31e-01 87.5% 46.2%
4959935 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.83 66.0 4.79e-01 84.7% 34.6%
4942107 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.83 68.0 5.64e-01 87.5% 55.8%
4964679 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.83 67.0 5.84e-01 86.1% 79.0%
5002856 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.83 66.0 5.48e-01 84.7% 55.0%
5058653 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 69.0 5.70e-01 88.9% 71.7%
4947925 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 70.0 5.23e-01 90.3% 41.7%
4944753 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 68.0 6.39e-01 87.5% 78.8%
5045747 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.82 68.0 6.24e-01 87.5% 80.0%
4950811 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.82 68.0 6.23e-01 87.5% 71.1%
3281879 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.82 67.0 4.92e-01 87.5% 42.8%
4927073 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.82 65.0 4.80e-01 84.7% 73.7%
4097415 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.82 61.0 6.26e-01 79.2% 85.7%
219927 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.82 69.0 5.05e-01 90.3% 37.9%
4979041 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.82 73.0 5.59e-01 97.2% 63.2%
5069995 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.82 65.0 4.47e-01 84.7% 38.2%
5039984 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.82 71.0 5.29e-01 93.1% 43.6%
5028348 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.81 69.0 4.90e-01 90.3% 34.9%
4994455 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 67.0 5.93e-01 87.5% 85.0%
5025804 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.81 67.0 5.26e-01 87.5% 60.0%
4982703 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.81 64.0 5.97e-01 84.7% 73.3%
5003874 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.81 64.0 5.37e-01 84.7% 66.7%
3958859 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 67.0 6.45e-01 87.5% 83.7%
5069274 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.81 66.0 5.58e-01 87.5% 58.3%
4404596 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 63.0 5.11e-01 83.3% 49.2%
5035685 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.81 66.0 5.42e-01 87.5% 61.3%
5025618 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 66.0 5.64e-01 87.5% 60.0%
5027566 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 63.0 5.95e-01 83.3% 76.5%
4946114 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 61.0 5.35e-01 80.6% 61.5%
4986012 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.80 66.0 4.61e-01 87.5% 32.4%
5012029 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.80 68.0 5.62e-01 90.3% 60.0%
5022036 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 66.0 5.23e-01 87.5% 48.9%
5013170 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.80 67.0 6.21e-01 90.3% 76.7%
4987112 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 66.0 5.30e-01 87.5% 52.3%
5062639 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.80 65.0 5.91e-01 87.5% 69.5%
1884678 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.80 60.0 5.88e-01 80.6% 82.1%
5031648 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.80 70.0 5.23e-01 94.4% 45.5%
4983992 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.80 65.0 4.97e-01 87.5% 53.5%
5041543 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.79 65.0 5.13e-01 87.5% 47.1%
4403519 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 69.0 5.16e-01 94.4% 45.9%
4927759 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.79 62.0 4.74e-01 84.7% 41.2%
4999154 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.79 61.0 5.73e-01 81.9% 72.9%
4993652 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.78 68.0 5.01e-01 93.1% 40.6%
5033035 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 66.0 5.53e-01 90.3% 59.3%
3278012 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 63.0 6.40e-01 86.1% 92.9%
4940261 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.78 60.0 6.13e-01 81.9% 91.4%
5078667 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.78 63.0 5.30e-01 87.5% 55.0%
4994432 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 64.0 5.56e-01 87.5% 64.8%
5078403 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.78 58.0 5.79e-01 79.2% 84.0%
4965874 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.77 65.0 5.23e-01 90.3% 53.7%
5033290 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.77 65.0 5.41e-01 90.3% 57.5%
4930172 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.77 63.0 5.33e-01 87.5% 55.7%
4974447 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 5.39e-01 90.3% 58.3%
5016748 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.77 66.0 5.48e-01 91.7% 60.8%
4966215 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 60.0 4.56e-01 83.3% 41.2%
4947062 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 63.0 5.68e-01 87.5% 75.8%
4966185 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.77 59.0 5.43e-01 83.3% 71.6%
4985036 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.77 67.0 4.99e-01 94.4% 42.9%
5076562 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 59.0 5.31e-01 83.3% 79.0%
4669204 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 69.0 4.23e-01 100.0% 26.6%
4947441 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 62.0 5.85e-01 87.5% 78.8%
4981949 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 5.94e-01 87.5% 85.0%
4937951 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.75 65.0 5.78e-01 94.4% 75.0%
5061514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 61.0 4.48e-01 90.3% 91.6%
4974744 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.73 63.0 4.72e-01 94.4% 41.7%
4969068 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.73 58.0 5.39e-01 84.7% 70.0%
5066057 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.73 58.0 5.37e-01 88.9% 67.8%
4956874 101.1.2.31 alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha 0.73 61.0 5.54e-01 91.7% 73.7%
4957324 101.1.2.920 alpha arrays › HTH › HTH › winged helix domain › HTH_TbsP_C 0.72 58.0 4.88e-01 90.3% 57.6%
None 0.71 59.0 5.03e-01 90.3% 61.7%
4073416 101.1.2.278 alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.70 59.0 4.85e-01 91.7% 57.6%