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LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00333

Bact-Vir

LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00333

Identity

Kingdom:
phage

Quality

88.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 35-150
PDB
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.83 78.0 5.79e-01 100.0% 78.8%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.82 77.0 5.67e-01 100.0% 69.2%
4k3bA06 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.81 70.0 4.78e-01 90.5% 40.9%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.81 77.0 5.48e-01 100.0% 60.5%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.81 70.0 4.99e-01 91.4% 37.3%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.81 74.0 5.36e-01 97.4% 96.6%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.81 75.0 4.93e-01 100.0% 98.2%
2f1cX00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.80 69.0 5.32e-01 93.1% 56.7%
4fqeA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.79 73.0 6.30e-01 97.4% 93.5%
3sy9C01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.78 68.0 4.74e-01 92.2% 46.2%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.78 67.0 4.25e-01 90.5% 34.8%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.78 72.0 5.54e-01 98.3% 76.9%
2wjqA00 2.40.160.40 Mainly Beta › Beta Barrel › Porin › monomeric porin ompg 0.78 71.0 5.76e-01 96.6% 75.6%
4epaA00 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.78 72.0 4.43e-01 100.0% 76.3%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.77 69.0 4.68e-01 98.3% 93.9%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.75 64.0 4.28e-01 90.5% 27.9%
2vdfA00 2.40.128.100 Mainly Beta › Beta Barrel › Lipocalin › OPCA outer membrane adhesin/invasin 0.75 70.0 5.55e-01 100.0% 77.3%
1by5A02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.75 64.0 4.05e-01 91.4% 40.1%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.74 68.0 4.94e-01 100.0% 75.6%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.72 61.0 3.89e-01 90.5% 39.9%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.72 67.0 4.93e-01 100.0% 75.3%
6fokB01 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.71 65.0 4.04e-01 100.0% 37.7%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.71 60.0 3.89e-01 91.4% 43.4%
1zhxA03 2.40.160.120 Mainly Beta › Beta Barrel › Porin › 0.70 60.0 5.07e-01 92.2% 74.3%
3aa0B02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.70 57.0 5.12e-01 85.3% 77.4%
3jtyB01 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.69 63.0 4.36e-01 100.0% 64.1%
1bh3A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.68 63.0 4.63e-01 99.1% 53.3%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.67 62.0 4.75e-01 100.0% 69.2%
3dzmB00 2.40.160.70 Mainly Beta › Beta Barrel › Porin › outer membrane protein from Thermus thermophilus HB27. 0.67 53.0 4.44e-01 85.3% 86.8%
3qlbA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.66 55.0 3.59e-01 92.2% 35.5%
7x7zA01 2.40.480.10 Mainly Beta › Beta Barrel › AOC barrel-like › Allene oxide cyclase-like 0.66 58.0 5.47e-01 94.8% 84.9%
2gr7A00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.65 41.0 4.35e-01 71.6% 71.3%
3k25A00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.63 50.0 3.70e-01 83.6% 95.5%
2bmoB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 45.0 3.80e-01 75.0% 85.1%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 53.0 4.47e-01 100.0% 56.3%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.62 55.0 5.04e-01 99.1% 89.0%
1qj8A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.61 53.0 4.93e-01 94.8% 84.5%
2r55A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 49.0 4.07e-01 87.1% 57.2%
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.60 54.0 4.80e-01 100.0% 84.9%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.59 51.0 4.43e-01 93.1% 79.3%
1tk1A00 3.40.1500.10 Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic 0.58 44.0 3.62e-01 80.2% 65.8%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 47.0 4.59e-01 86.2% 97.6%
4i0nA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.58 45.0 3.45e-01 82.8% 80.3%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.58 51.0 4.63e-01 97.4% 78.1%
3ff0A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 3.89e-01 75.0% 89.4%
3h51A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 41.0 3.90e-01 75.9% 92.3%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.56 49.0 4.09e-01 99.1% 93.0%
3rwxA02 2.40.128.350 Mainly Beta › Beta Barrel › Lipocalin › 0.53 48.0 4.60e-01 97.4% 87.9%
2f86B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 44.0 4.29e-01 89.7% 82.2%
7f13A01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 46.0 4.30e-01 94.8% 76.4%
1fx3B00 3.10.420.10 Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like 0.52 37.0 3.48e-01 74.1% 71.1%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 43.0 3.95e-01 94.0% 73.4%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3405242 5084.5.1.37 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.89 75.0 6.22e-01 91.4% 55.2%
4135567 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.85 77.0 5.15e-01 94.8% 60.4%
3941948 5084.5.1.18 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.83 76.0 5.41e-01 96.6% 83.2%
3970343 5084.5.1.24 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Gcw_chp 0.83 71.0 5.60e-01 98.3% 47.9%
4329332 5084.5.1.18 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › BCSC_C 0.83 78.0 5.21e-01 100.0% 46.1%
3944680 5084.5.3.7 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › BCSC_C 0.83 78.0 5.27e-01 100.0% 49.1%
4546669 5084.5.1.5 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › ShlB 0.82 78.0 5.19e-01 100.0% 95.0%
3980621 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.82 75.0 5.95e-01 95.7% 72.1%
885 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.82 77.0 5.67e-01 100.0% 69.2%
4315977 5084.5.1.37 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.81 71.0 5.30e-01 91.4% 41.2%
1312446 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.81 70.0 4.99e-01 91.4% 37.3%
4662377 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.81 75.0 5.42e-01 99.1% 70.5%
3976425 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.81 74.0 5.93e-01 96.6% 77.1%
3968185 5085.1.1.1 a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP 0.81 62.0 4.08e-01 80.2% 62.7%
3964794 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.80 75.0 5.79e-01 100.0% 55.4%
3963279 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.80 70.0 4.95e-01 92.2% 38.0%
3387633 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.79 73.0 5.12e-01 97.4% 95.4%
3975988 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.79 74.0 5.56e-01 100.0% 62.7%
4009329 5084.5.1.27 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › NfrA_C 0.78 73.0 5.60e-01 100.0% 91.8%
4602917 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.78 73.0 5.14e-01 100.0% 59.7%
3968806 5084.5.1.68 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27733 0.78 73.0 5.90e-01 100.0% 74.5%
4664957 5084.5.2.0 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like 0.77 65.0 4.44e-01 89.7% 47.0%
4539531 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.77 71.0 4.94e-01 100.0% 52.7%
4195943 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.77 70.0 5.02e-01 100.0% 94.5%
4603160 5084.5.4.4 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › YaiO 0.76 72.0 5.52e-01 100.0% 63.4%
4440914 5084.5.3.0 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel 0.75 69.0 4.23e-01 100.0% 73.9%
3985235 5084.10.1.1 beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.74 63.0 4.00e-01 90.5% 33.9%
4116729 5084.1.1.6 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OprF 0.74 58.0 4.99e-01 80.2% 66.5%
3742156 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.74 64.0 4.48e-01 92.2% 37.7%
4044109 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.74 67.0 4.70e-01 97.4% 64.4%
4856841 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.74 68.0 4.77e-01 99.1% 63.3%
3164124 5084.1.1.4 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.73 58.0 5.79e-01 84.5% 95.8%
3944999 5084.8.1.0 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore 0.73 60.0 4.03e-01 89.7% 23.7%
3511259 5084.3.1.1 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.72 64.0 4.67e-01 95.7% 48.7%
4008277 5084.5.1.62 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PF27458 0.72 65.0 4.64e-01 97.4% 60.0%
4064323 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.71 65.0 4.37e-01 99.1% 36.2%
3594616 1100.1.1.0 beta meanders › TIP41-like protein › TIP41-like protein › TIP41-like protein 0.71 60.0 4.63e-01 89.7% 51.4%
2141087 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.70 63.0 4.45e-01 99.1% 40.0%
1760802 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.69 59.0 3.90e-01 91.4% 30.7%
4336262 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.69 63.0 4.39e-01 100.0% 69.2%
4113659 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.69 62.0 4.32e-01 99.1% 52.5%
3933957 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.68 54.0 4.85e-01 83.6% 76.9%
3265029 883.1.1.0 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.68 53.0 4.26e-01 81.9% 71.6%
4513489 5084.5.2.1 beta barrels › Outer membrane meander beta-barrels › Porins › Maltoporin-like › LamB 0.68 62.0 4.30e-01 97.4% 56.1%
5065294 4051.1.1.0 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.68 54.0 4.70e-01 83.6% 69.4%
3173251 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.67 55.0 4.76e-01 85.3% 77.1%
3787225 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.67 53.0 4.45e-01 83.6% 70.8%
1761798 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.66 55.0 3.59e-01 92.2% 35.5%
3228525 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.63 49.0 5.06e-01 91.4% 85.5%
3838164 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.62 56.0 4.82e-01 99.1% 93.5%
3484227 4051.1.1.0 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.62 49.0 4.33e-01 84.5% 67.1%
4515973 5084.5.1.32 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › LOC400499 0.62 49.0 3.14e-01 83.6% 21.1%
None 0.61 53.0 4.93e-01 94.8% 84.5%
4421608 5084.1.1.35 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Surface_Ag_2 0.60 55.0 4.32e-01 99.1% 94.9%
3980016 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.60 53.0 4.97e-01 94.8% 90.7%
4222629 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.60 54.0 4.92e-01 99.1% 91.6%
145377 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.60 51.0 4.72e-01 94.8% 85.5%
3838398 5084.1.1.15 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.59 53.0 4.60e-01 99.1% 83.9%
3975352 5084.1.1.10 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.59 53.0 4.85e-01 99.1% 86.3%
5057736 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.59 51.0 4.83e-01 93.1% 79.3%
3843944 243.5.1.7 a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › AKAP28 0.57 42.0 4.15e-01 91.4% 72.0%
4976957 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.50 44.0 3.79e-01 99.1% 91.7%
D2 medium residues 151-227
PDB
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.85 69.0 4.71e-01 100.0% 27.3%
1a0sP00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.78 71.0 4.40e-01 100.0% 24.5%
4ggtB00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.78 56.0 5.02e-01 100.0% 54.7%
3bxoA02 2.20.130.10 Mainly Beta › Single Sheet › S-adenosyl-L-methionine-dependent methyltransferases › CAC2371-like domains 0.77 54.0 6.13e-01 88.3% 94.9%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.77 71.0 4.66e-01 100.0% 37.5%
2gr7A00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.77 58.0 5.25e-01 100.0% 60.4%
1xkwA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.76 70.0 4.15e-01 100.0% 17.2%
1af6A00 2.40.170.10 Mainly Beta › Beta Barrel › Maltoporin; Chain A › Porin, LamB type 0.76 70.0 4.30e-01 100.0% 25.7%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.75 70.0 4.29e-01 100.0% 22.9%
4aipC02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.75 70.0 4.10e-01 100.0% 18.6%
3grdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.75 52.0 4.29e-01 71.4% 46.2%
3kvnA02 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.74 69.0 4.49e-01 100.0% 30.8%
1e54A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.74 63.0 4.07e-01 100.0% 21.5%
3ke7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.74 48.0 4.01e-01 87.0% 39.1%
3ec9A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.73 50.0 4.22e-01 71.4% 45.7%
6secA03 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.72 66.0 4.38e-01 100.0% 73.6%
2porA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.72 65.0 4.32e-01 100.0% 28.2%
3efmA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.72 66.0 4.05e-01 100.0% 23.9%
4g2aA01 2.60.40.3680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.71 51.0 3.59e-01 75.3% 55.6%
1kmoA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.70 64.0 3.83e-01 100.0% 21.4%
6r3wA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.70 57.0 4.47e-01 100.0% 42.2%
1t5rB00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.70 60.0 4.06e-01 93.5% 74.9%
5dl8A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.69 62.0 3.90e-01 100.0% 24.3%
2jlpB00 2.60.40.200 Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain 0.68 57.0 4.40e-01 90.9% 65.7%
3fgyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.68 51.0 4.20e-01 83.1% 45.2%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.68 45.0 4.83e-01 77.9% 80.0%
2bngC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.67 46.0 3.74e-01 70.1% 42.9%
1snzB00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 59.0 3.85e-01 100.0% 64.3%
4akrA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.66 61.0 4.83e-01 100.0% 53.1%
1ygaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.66 57.0 3.79e-01 100.0% 69.3%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.66 53.0 4.22e-01 87.0% 45.3%
1wznA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.65 45.0 5.00e-01 85.7% 98.2%
3anzC00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.65 56.0 3.71e-01 93.5% 73.1%
3imhA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.64 56.0 3.73e-01 100.0% 65.1%
1a2vA03 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.64 56.0 3.51e-01 100.0% 84.1%
1yc9A02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.64 57.0 5.56e-01 96.1% 97.6%
4h3uA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 48.0 4.09e-01 81.8% 51.5%
3dcdA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.63 55.0 3.77e-01 100.0% 69.9%
4j8tA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 44.0 3.80e-01 85.7% 45.3%
3e99A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 47.0 3.77e-01 90.9% 41.2%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 46.0 3.66e-01 89.6% 39.0%
6f1uK02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.62 56.0 4.53e-01 100.0% 52.4%
5bw0F00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.61 44.0 4.23e-01 87.0% 64.8%
2ns9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 56.0 4.47e-01 100.0% 54.7%
7a0hA02 3.90.1150.210 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit 0.61 55.0 4.19e-01 100.0% 57.5%
3zghA00 2.60.40.3400 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 49.0 3.87e-01 93.5% 78.0%
3pgbA01 2.70.98.20 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain 0.60 54.0 3.26e-01 100.0% 16.1%
3dm8A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 45.0 3.75e-01 85.7% 45.9%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.59 42.0 4.13e-01 88.3% 67.9%
1rwhA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.59 52.0 4.57e-01 96.1% 86.8%
2wcoA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.59 53.0 4.64e-01 100.0% 87.0%
4eg9A00 2.50.20.40 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.59 46.0 3.30e-01 90.9% 28.1%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.59 53.0 3.71e-01 100.0% 42.3%
3robA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 48.0 4.09e-01 92.2% 83.2%
2b1xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 48.0 3.78e-01 92.2% 82.0%
5uj1A03 2.70.20.10 Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 0.56 44.0 3.49e-01 87.0% 50.3%
3soyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 47.0 3.91e-01 96.1% 80.3%
2vzsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 3.47e-01 72.7% 64.5%
3bb9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 49.0 4.14e-01 97.4% 87.2%
1q42A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 47.0 3.75e-01 96.1% 85.5%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.54 46.0 3.59e-01 100.0% 42.5%
4o3vA00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.53 46.0 3.81e-01 96.1% 89.9%
3kspA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 42.0 3.65e-01 96.1% 82.9%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3385986 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.84 68.0 4.87e-01 100.0% 32.8%
3983528 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.84 68.0 4.61e-01 100.0% 26.6%
3976425 5084.5.1.8 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › KdgM 0.83 73.0 5.15e-01 100.0% 34.3%
4009646 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.83 67.0 4.38e-01 100.0% 22.4%
3978431 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.82 66.0 4.52e-01 100.0% 26.4%
3964794 5084.5.4.5 beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › SlipAM 0.78 72.0 4.95e-01 100.0% 33.8%
3976326 5084.3.1.2 beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › IAT_beta 0.77 62.0 4.66e-01 90.9% 36.7%
1413889 274.1.1.5 a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.77 58.0 5.46e-01 100.0% 67.0%
3404731 5084.5.1.37 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Attacin_N, Attacin_C 0.74 65.0 4.81e-01 100.0% 40.0%
4219386 5084.5.1.1 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.74 68.0 4.27e-01 100.0% 21.5%
4276603 5084.10.1.1 beta barrels › Outer membrane meander beta-barrels › LPS-assembly protein LptD › LPS-assembly protein LptD › LptD 0.73 65.0 3.88e-01 98.7% 22.6%
4511741 274.1.1.5 a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.73 53.0 5.05e-01 100.0% 65.6%
4539531 5084.5.1.11 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_4 0.72 65.0 4.15e-01 100.0% 21.4%
3181774 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.72 65.0 4.20e-01 98.7% 65.8%
3611705 5084.5.1.2 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Omp85 0.71 63.0 4.05e-01 100.0% 24.3%
4022346 12.3.1.6 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Bgal_small_N 0.71 64.0 4.21e-01 100.0% 68.3%
3391818 3070.2.1.0 a+b complex topology › N0 domain in phage tail proteins and secretins-like › TonB-dependent receptor plug domain › TonB-dependent receptor plug domain 0.70 64.0 5.85e-01 100.0% 76.8%
4591311 5084.5.3.1 beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.70 64.0 3.65e-01 98.7% 17.9%
4668983 4051.1.1.0 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.70 64.0 4.96e-01 100.0% 50.6%
5037445 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.69 53.0 3.60e-01 98.7% 23.8%
3970343 5084.5.1.24 beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Gcw_chp 0.68 61.0 4.40e-01 98.7% 40.0%
4466226 5087.1.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell 0.68 56.0 5.03e-01 98.7% 64.8%
5065294 4051.1.1.0 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.68 63.0 4.78e-01 100.0% 45.9%
5047424 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.68 52.0 4.48e-01 93.5% 52.5%
4025435 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.67 62.0 4.56e-01 100.0% 41.1%
4974362 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.67 50.0 3.50e-01 90.9% 24.6%
3739953 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.67 59.0 4.59e-01 100.0% 47.1%
5047928 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.67 51.0 4.42e-01 93.5% 52.5%
3980013 5084.8.1.1 beta barrels › Outer membrane meander beta-barrels › Usher PapC translocation pore › Usher PapC translocation pore › Usher 0.67 58.0 3.64e-01 100.0% 17.8%
3425790 243.3.1.19 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 0.66 47.0 4.38e-01 87.0% 60.0%
1412232 12.3.1.3 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.66 60.0 3.87e-01 100.0% 63.4%
4025861 4051.1.1.1 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F_actin_cap_B 0.66 60.0 4.60e-01 100.0% 46.5%
5003871 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.66 47.0 3.85e-01 84.4% 41.4%
3534691 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.65 60.0 4.58e-01 100.0% 46.1%
4955361 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.65 47.0 3.33e-01 100.0% 23.5%
3875809 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.65 60.0 4.57e-01 100.0% 46.1%
3056279 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.64 58.0 4.50e-01 100.0% 46.6%
3403847 9.1.1.47 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Chitin_bind_4 0.64 47.0 4.54e-01 97.4% 67.8%
3624756 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.64 47.0 4.25e-01 94.8% 57.7%
3769924 243.1.1.12 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 0.63 47.0 4.02e-01 96.1% 47.7%
5035736 71.1.1.26 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF3108 0.62 54.0 4.13e-01 97.4% 42.4%
1569478 527.1.1.1 beta sandwiches › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Orthopox_35kD 0.62 53.0 4.15e-01 92.2% 66.7%
3270312 4051.1.1.2 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › F-actin_cap_A 0.61 54.0 4.17e-01 100.0% 44.0%
5044863 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.61 50.0 4.23e-01 98.7% 53.8%
4265077 5084.1.1.34 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › DUF2715 0.60 52.0 4.18e-01 98.7% 48.1%
4188370 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.60 52.0 3.62e-01 100.0% 64.4%
4997740 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.60 54.0 4.42e-01 100.0% 55.7%
3972133 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.59 43.0 3.10e-01 92.2% 25.4%
3408261 243.3.1.35 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF229 0.58 46.0 3.80e-01 85.7% 51.8%
4451360 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.58 50.0 3.53e-01 100.0% 63.1%
4413342 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.57 49.0 3.48e-01 100.0% 63.8%
4382059 12.3.1.24 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.57 49.0 3.42e-01 100.0% 61.4%
3628180 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.57 50.0 4.04e-01 100.0% 72.3%
3286883 2003.1.5.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.56 44.0 3.11e-01 98.7% 26.5%
5064686 4178.1.1.1 beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 0.54 48.0 4.09e-01 100.0% 98.4%
4597423 12.2.1.4 beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Vanin_C 0.53 46.0 3.73e-01 96.1% 81.3%
3615659 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.53 45.0 3.50e-01 100.0% 92.6%
3613822 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 45.0 2.89e-01 100.0% 48.7%
4937055 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 45.0 3.39e-01 100.0% 91.2%