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LacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00338
Bact-VirLacPavin_0818_WC55_scaffold_113784_prodigal-single.1__X__X__00338
Identity
- Kingdom:
- phage
Quality
93.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-205
Domain cluster:
rep: IMGVR_UViG_3300009616_000257-3300009616-Ga0116111_100275611__D486-632
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04989.19 best | RMNT_CmcI | 28.8 | 1.40e-06 | 92.5% | 64.1% |
| PF13578.13 | Methyltransf_24 | 55.1 | 1.90e-14 | 50.2% | 100.0% |
D2
high
residues 209-350_377-402
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_407201_prodigal-single.1__X__X__00025__D3-106_124-159
D3
medium
residues 351-376_403-449
Domain cluster:
representative
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5035449 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.52 | 44.0 | 3.17e-01 | 100.0% | 53.1% |
| 4940711 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.52 | 44.0 | 3.22e-01 | 100.0% | 52.8% |
| 5020026 | 3407.1.1.0 ↗ | mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.51 | 31.0 | 2.97e-01 | 75.3% | 51.8% |