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LacPavin_0818_WC55_scaffold_2946_prodigal-single.1__X__X__00011

Bact-Vir

LacPavin_0818_WC55_scaffold_2946_prodigal-single.1__X__X__00011

Identity

Kingdom:
phage

Quality

51.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 70-120_132-186
PDB
D2 high residues 268-284_321-487
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u9pA00 1.10.1220.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like 0.53 29.0 3.71e-01 89.7% 95.8%
4dwnA00 1.10.533.10 Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas 0.50 24.0 3.13e-01 72.3% 80.4%
3a06B03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.50 22.0 3.05e-01 89.7% 81.8%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
185732 3374.1.1.2 a+b complex topology › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › spore cortex-lytic enzyme catalytic domain › Hydrolase_2 0.79 50.0 5.96e-01 90.8% 90.6%