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LacPavin_0818_WC55_scaffold_2946_prodigal-single.1__X__X__00278

Bact-Vir

LacPavin_0818_WC55_scaffold_2946_prodigal-single.1__X__X__00278

Identity

Kingdom:
phage

Quality

70.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 107-262
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mo1A00 1.10.274.110 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › 0.55 36.0 3.74e-01 85.3% 69.7%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.50 25.0 2.83e-01 81.4% 60.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3403613 5050.1.1.9 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 0.58 34.0 3.12e-01 80.1% 43.5%
5023340 4070.1.1.0 alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like 0.55 37.0 3.37e-01 85.9% 51.0%
5049454 205.1.1.0 a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin 0.53 38.0 3.00e-01 73.1% 66.6%
4947606 4070.1.1.2 alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like › Peptidase_M50 0.53 37.0 3.18e-01 71.8% 95.9%