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LacPavin_0818_WC55_scaffold_56344_prodigal-single.1__X__X__00100

Bact-Vir

LacPavin_0818_WC55_scaffold_56344_prodigal-single.1__X__X__00100

Identity

Kingdom:
phage

Quality

73.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-134
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1qzzA03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.76 43.0 3.95e-01 96.9% 42.6%
3tm4A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.75 40.0 3.55e-01 97.7% 37.1%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.75 46.0 3.80e-01 96.9% 36.4%
4qdjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.75 42.0 3.52e-01 96.1% 33.7%
2yx1A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.74 39.0 3.50e-01 96.9% 37.2%
2ca9A02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.74 37.0 4.36e-01 88.4% 68.5%
1xdzA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.72 42.0 3.42e-01 99.2% 31.5%
5f2kB02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.70 43.0 3.64e-01 96.1% 37.4%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.69 43.0 4.95e-01 100.0% 86.0%
1t7vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.69 39.0 4.53e-01 74.4% 78.9%
6c98A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 38.0 4.40e-01 74.4% 78.0%
3ofkA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.66 41.0 3.55e-01 96.9% 38.7%
2vzsA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 39.0 4.37e-01 73.6% 75.2%
1c16A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 38.0 4.26e-01 74.4% 75.3%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.64 25.0 4.08e-01 96.1% 100.0%
1txkB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 41.0 4.30e-01 74.4% 73.0%
3a27A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 45.0 3.73e-01 89.9% 43.4%
3o1lB01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.62 35.0 4.17e-01 83.7% 80.7%
3bm7A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 33.0 3.65e-01 86.8% 63.2%
2g1dA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.61 37.0 4.20e-01 98.4% 80.6%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 32.0 3.51e-01 98.4% 60.2%
3w7bA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 34.0 4.04e-01 81.4% 83.0%
6ue9L02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 37.0 3.85e-01 74.4% 67.2%
5eovA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 47.0 4.04e-01 90.7% 54.6%
1vcaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 34.0 3.67e-01 74.4% 66.4%
5jtfB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 34.0 3.12e-01 97.7% 42.3%
1h6eA02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.56 38.0 4.15e-01 72.9% 83.8%
3d2uA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 38.0 4.42e-01 74.4% 100.0%
4en2A02 2.60.40.1170 Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B 0.55 37.0 4.10e-01 96.9% 85.6%
3g88A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 39.0 3.27e-01 93.8% 41.0%
7o0eA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.54 34.0 4.14e-01 93.0% 98.8%
2rttA00 2.60.40.290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 35.0 3.84e-01 72.9% 82.9%
4xeaA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.52 38.0 3.35e-01 76.7% 50.5%
3eniC00 2.50.10.10 Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A 0.52 47.0 3.46e-01 100.0% 62.1%
3njaA02 2.10.70.100 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.52 22.0 3.17e-01 72.1% 100.0%
3qw9B00 2.60.40.4100 Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain 0.52 40.0 3.72e-01 99.2% 63.9%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.51 41.0 3.09e-01 85.3% 50.3%
5kckA00 3.60.120.10 Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase 0.51 43.0 3.01e-01 92.2% 63.0%
3fz2A00 3.30.70.1700 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U 0.51 44.0 4.43e-01 93.8% 97.7%
4nasB01 3.30.70.150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain 0.51 36.0 3.87e-01 80.6% 85.0%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3305434 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.78 45.0 5.41e-01 86.8% 83.3%
3823591 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.78 44.0 4.95e-01 74.4% 72.0%
4189238 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.77 41.0 3.45e-01 93.8% 31.9%
5066768 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 39.0 4.27e-01 80.6% 61.0%
4941923 2003.1.5.5 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 0.75 45.0 3.71e-01 96.1% 35.3%
3426902 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.72 45.0 5.25e-01 86.8% 85.3%
3650268 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.72 42.0 3.07e-01 96.1% 22.2%
4292276 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.71 42.0 3.50e-01 99.2% 34.5%
None 0.70 42.0 3.47e-01 99.2% 33.5%
4484429 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.70 42.0 3.36e-01 99.2% 31.0%
None 0.69 41.0 3.39e-01 99.2% 33.0%
4437131 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.68 38.0 3.27e-01 96.1% 33.3%
5051667 2003.1.5.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › FtsJ 0.68 46.0 3.98e-01 94.6% 45.0%
1586 11.1.1.264 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_GlcNase 0.65 39.0 4.05e-01 73.6% 63.6%
4030972 304.124.1.0 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like 0.63 49.0 5.10e-01 99.2% 88.3%
4026407 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.62 40.0 4.02e-01 99.2% 63.8%
5053279 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.61 45.0 3.89e-01 96.1% 51.1%
1498215 306.9.1.1 a+b two layers › Glucose permease domain IIB-like › MecA substrate binding domain › MecA substrate binding domain › MecA 0.61 39.0 4.55e-01 70.5% 92.2%
4247508 306.7.1.1 a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.61 42.0 4.45e-01 71.3% 100.0%
4964003 241.1.1.29 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF5813 0.60 49.0 4.64e-01 91.5% 71.6%
5082913 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.60 44.0 3.71e-01 96.1% 47.1%
5010231 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.59 43.0 3.76e-01 95.3% 51.6%
3353861 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.58 35.0 2.82e-01 94.6% 28.8%
4340596 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.58 42.0 3.44e-01 94.6% 40.0%
4269000 304.18.1.1 a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS › FDX-ACB 0.58 36.0 4.00e-01 72.1% 77.1%
3743260 212.1.1.0 a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like 0.58 42.0 4.02e-01 76.0% 78.0%
5040878 2003.1.5.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Met_10 0.57 38.0 3.05e-01 86.8% 33.5%
4448813 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.56 41.0 3.40e-01 93.8% 41.7%
135381 2003.1.5.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GidB 0.54 39.0 3.27e-01 93.8% 41.0%
4937095 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.54 40.0 4.19e-01 92.2% 86.1%
5080315 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.54 36.0 3.42e-01 89.1% 56.5%
5030161 4081.1.1.0 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related 0.53 43.0 3.88e-01 99.2% 63.4%
3638931 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.52 49.0 3.98e-01 100.0% 93.5%
4945880 304.42.1.1 a+b two layers › Alpha-beta plaits › Molybdenum cofactor biosynthesis protein C, MoaC › Molybdenum cofactor biosynthesis protein C, MoaC › MoaC 0.52 37.0 3.56e-01 89.9% 64.1%
5065076 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.52 46.0 4.19e-01 96.1% 94.1%
3783394 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.51 38.0 3.97e-01 99.2% 84.2%
3552777 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 40.0 2.57e-01 84.5% 23.9%
4271274 225.1.1.28 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › PF29744 0.50 43.0 3.98e-01 90.7% 93.1%
3602624 241.18.1.1 a+b two layers › Type III secretory system chaperone-like › MRB1590 N-terminal domain › MRB1590 N-terminal domain › ABC_N 0.50 40.0 3.69e-01 85.3% 84.2%
D2 high residues 203-292
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7ufsA01 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.71 61.0 4.32e-01 92.2% 93.1%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.70 50.0 4.05e-01 83.3% 39.2%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.70 52.0 4.14e-01 85.6% 39.5%
3u0aA00 2.40.160.210 Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain 0.69 53.0 3.78e-01 81.1% 51.6%
8ainB01 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.68 48.0 4.61e-01 74.4% 96.2%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 59.0 5.00e-01 100.0% 94.6%
2gtlN02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.65 57.0 4.71e-01 98.9% 76.5%
2gtlO02 2.40.128.620 Mainly Beta › Beta Barrel › Lipocalin › 0.64 56.0 4.66e-01 98.9% 77.9%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 56.0 4.95e-01 98.9% 100.0%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.63 55.0 4.83e-01 98.9% 100.0%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 55.0 4.56e-01 100.0% 57.4%
1oh1A00 2.40.310.10 Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors 0.60 50.0 4.70e-01 90.0% 83.5%
2oc3A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.60 46.0 3.22e-01 80.0% 30.5%
2lf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 50.0 4.07e-01 94.4% 50.3%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.59 49.0 4.48e-01 91.1% 92.6%
2v43A01 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.59 47.0 3.74e-01 86.7% 90.7%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 47.0 3.27e-01 90.0% 60.4%
1nycA00 2.40.310.10 Mainly Beta › Beta Barrel › Staphostatins › beta-Barrel protease inhibitors 0.58 50.0 4.67e-01 94.4% 81.1%
2r0hA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.58 45.0 3.74e-01 83.3% 56.9%
3h3hB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 44.0 4.10e-01 84.4% 100.0%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 50.0 4.22e-01 100.0% 85.0%
1aq3A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.57 48.0 4.29e-01 93.3% 78.3%
3kstA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 50.0 3.51e-01 97.8% 84.2%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 49.0 4.31e-01 100.0% 91.5%
5hx0A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.56 45.0 3.03e-01 87.8% 37.5%
5f7uA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.56 48.0 3.57e-01 93.3% 46.5%
2zgoA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.77e-01 88.9% 52.1%
2lfuA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.56 48.0 4.36e-01 100.0% 95.3%
2wsuA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.90e-01 87.8% 56.8%
4qwoB00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.55 44.0 3.92e-01 87.8% 59.8%
2wkkA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 44.0 3.77e-01 88.9% 54.0%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 3.99e-01 85.6% 83.3%
1xuvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 46.0 3.94e-01 100.0% 81.0%
6zxfz01 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.53 38.0 3.49e-01 75.6% 100.0%
6krwA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 45.0 3.16e-01 94.4% 34.7%
2a5zA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.27e-01 94.4% 72.0%
3zxjA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 41.0 2.88e-01 87.8% 39.7%
4hfsA00 2.60.120.1270 Mainly Beta › Sandwich › Jelly Rolls › 0.51 41.0 3.27e-01 90.0% 44.8%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3813621 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.74 50.0 4.94e-01 70.0% 82.1%
3262671 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.69 49.0 2.89e-01 74.4% 26.9%
3279448 9.1.1.17 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › MoaF 0.68 58.0 5.08e-01 92.2% 85.0%
4259027 9.3.1.3 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C 0.67 58.0 5.20e-01 93.3% 100.0%
3700971 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.64 56.0 4.33e-01 98.9% 73.8%
5047051 5.1.4.663 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SBBP 0.62 52.0 3.40e-01 90.0% 73.0%
5046573 844.1.1.2 beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › LOR 0.61 50.0 4.12e-01 87.8% 93.1%
3705081 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 47.0 3.21e-01 81.1% 23.5%
3581438 4291.1.1.1 beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP 0.60 53.0 3.52e-01 96.7% 24.4%
3787121 241.15.1.0 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain 0.60 51.0 4.59e-01 93.3% 73.6%
4401058 5087.1.1.1 beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-2 › Lipovitellin LV-2 › Vit_b-sht_shell 0.59 49.0 3.94e-01 91.1% 94.4%
4948119 5084.1.1.0 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.59 50.0 4.59e-01 94.4% 97.5%
3579354 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.59 50.0 4.68e-01 93.3% 99.1%
4002526 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.59 49.0 3.38e-01 93.3% 52.7%
3785769 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.59 51.0 4.42e-01 100.0% 88.0%
3605877 109.4.1.1164 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › zf-MYND 0.59 52.0 3.46e-01 96.7% 32.7%
3242222 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.58 47.0 3.25e-01 90.0% 49.3%
4034016 243.10.1.1 a+b two layers › Cystatin-like › Lin0334 protein › Lin0334 protein › DUF1433 0.58 49.0 4.51e-01 92.2% 83.5%
3582034 206.1.1.72 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal 0.58 48.0 3.32e-01 93.3% 53.4%
3601202 5.1.4.220 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd 0.58 47.0 3.14e-01 85.6% 31.6%
3957605 243.1.1.35 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ORF_12_N 0.57 43.0 4.26e-01 80.0% 100.0%
4931666 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.57 49.0 4.46e-01 94.4% 80.0%
3802306 284.1.2.0 a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.57 38.0 3.82e-01 70.0% 71.6%
3252796 883.1.1.22 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26547 0.56 47.0 3.70e-01 93.3% 79.8%
3225189 5.1.4.369 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N 0.56 46.0 2.69e-01 90.0% 15.4%
3926768 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.56 46.0 3.21e-01 92.2% 52.9%
3558025 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.55 42.0 2.89e-01 81.1% 49.1%
3909833 206.1.1.87 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, RIO1 0.55 41.0 2.89e-01 81.1% 52.1%
3176386 298.1.1.8 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C 0.55 49.0 3.82e-01 100.0% 71.6%
3588415 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.55 37.0 2.68e-01 70.0% 93.1%
3617510 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.54 38.0 2.66e-01 75.6% 47.0%
3871111 206.1.1.262 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Mad3_BUB1_I 0.54 43.0 2.72e-01 91.1% 36.3%
4008120 5.1.5.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 0.54 43.0 4.00e-01 90.0% 88.3%
4886133 4010.1.1.6 a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.54 41.0 3.04e-01 81.1% 93.0%
3654098 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.54 46.0 3.69e-01 100.0% 82.6%
3943894 77.1.1.7 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › DUF1481 0.54 43.0 3.95e-01 90.0% 84.8%
3807532 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 46.0 2.93e-01 97.8% 34.2%
3217504 9.1.1.49 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7043 0.53 44.0 4.27e-01 94.4% 95.2%
3619978 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 39.0 2.68e-01 78.9% 49.9%
3602202 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 46.0 3.57e-01 94.4% 85.3%
3785599 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.53 38.0 2.62e-01 75.6% 56.5%
3937046 9.2.1.5 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7043 0.53 44.0 4.28e-01 95.6% 95.2%
3491951 5.1.4.220 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd 0.53 44.0 2.96e-01 91.1% 36.0%
3176674 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.52 39.0 2.63e-01 81.1% 52.0%
3409717 633.33.1.1 alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz 0.52 44.0 3.36e-01 100.0% 73.6%
3416381 5.1.4.320 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 0.52 42.0 2.82e-01 88.9% 60.8%
3278294 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.52 45.0 4.19e-01 100.0% 89.1%
4580946 4041.1.1.1 a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 0.52 39.0 2.96e-01 81.1% 36.1%
4849080 5084.1.1.44 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HphA_C 0.51 40.0 4.21e-01 94.4% 100.0%
2429140 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 40.0 2.72e-01 84.4% 23.9%
3923792 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 40.0 2.90e-01 86.7% 30.0%
4959306 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 44.0 3.06e-01 98.9% 84.2%
3797513 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 41.0 2.91e-01 90.0% 54.3%
D3 high residues 330-423
PDB
CATH (82)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 52.0 6.12e-01 75.5% 98.5%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 5.93e-01 84.0% 78.0%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 50.0 5.97e-01 74.5% 100.0%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 56.0 5.80e-01 77.7% 87.4%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 57.0 5.15e-01 79.8% 61.1%
4g9yA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 58.0 5.06e-01 80.9% 57.4%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 59.0 5.10e-01 83.0% 58.9%
2fbiA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 58.0 5.10e-01 81.9% 57.4%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 54.0 5.66e-01 76.6% 84.5%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 54.0 5.26e-01 76.6% 73.3%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 52.0 5.29e-01 77.7% 74.2%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 4.80e-01 80.9% 52.9%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 5.12e-01 85.1% 57.7%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 50.0 5.51e-01 70.2% 89.3%
3bjaA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 4.91e-01 81.9% 56.1%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 5.62e-01 95.7% 76.9%
2nyxB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 55.0 4.81e-01 80.9% 54.9%
2nnnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 56.0 4.98e-01 81.9% 58.3%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 54.0 4.63e-01 80.9% 50.7%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 59.0 5.96e-01 95.7% 89.2%
3df8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.37e-01 84.0% 72.5%
2oqgB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 5.53e-01 96.8% 75.9%
1r1uB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.93e-01 95.7% 89.2%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 56.0 5.01e-01 84.0% 61.4%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 54.0 4.77e-01 80.9% 56.9%
1xmkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 5.91e-01 85.1% 96.2%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 54.0 4.49e-01 81.9% 46.4%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.71 57.0 5.19e-01 86.2% 93.5%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 55.0 4.69e-01 83.0% 51.6%
1fp2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.80e-01 88.3% 88.5%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 5.89e-01 95.7% 92.2%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 4.65e-01 83.0% 52.3%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 5.49e-01 96.8% 73.5%
4em2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 4.66e-01 83.0% 52.7%
6pcoC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 54.0 4.84e-01 83.0% 59.1%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 5.64e-01 85.1% 87.0%
5jbrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 50.0 5.22e-01 75.5% 84.9%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 49.0 5.11e-01 73.4% 84.7%
2a07J00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 5.43e-01 77.7% 95.2%
1ku9B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 49.0 5.07e-01 73.4% 82.8%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 5.56e-01 89.4% 80.8%
5hs7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 5.63e-01 94.7% 84.7%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 6.02e-01 95.7% 96.7%
3pqkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.52e-01 94.7% 82.8%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 53.0 5.59e-01 84.0% 91.7%
2pg4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.77e-01 93.6% 91.2%
1r1tA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.56e-01 94.7% 83.7%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 55.0 5.56e-01 94.7% 86.2%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 5.71e-01 89.4% 97.9%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 5.42e-01 77.7% 92.3%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 5.14e-01 77.7% 83.3%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 5.09e-01 78.7% 87.0%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 5.65e-01 91.5% 85.1%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 49.0 5.50e-01 76.6% 100.0%
3qphA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 51.0 5.09e-01 84.0% 77.3%
3lfkD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 53.0 5.10e-01 95.7% 72.7%
1q1hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 5.23e-01 78.7% 87.1%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 50.0 5.29e-01 85.1% 89.3%
4gyiA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.55e-01 96.8% 90.3%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 46.0 5.20e-01 74.5% 98.6%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 5.29e-01 87.2% 84.7%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 50.0 5.24e-01 89.4% 91.5%
4y66F01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 43.0 4.94e-01 73.4% 95.5%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 5.44e-01 95.7% 86.1%
2lycA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.65 53.0 4.77e-01 87.2% 90.0%
1fokA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 4.75e-01 74.5% 79.3%
5optn00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 48.0 4.84e-01 77.7% 82.8%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 5.04e-01 80.9% 94.7%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 51.0 5.39e-01 95.7% 96.5%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 52.0 5.25e-01 95.7% 90.4%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 48.0 4.97e-01 87.2% 86.7%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.62 41.0 4.21e-01 75.5% 68.8%
1fnnB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 54.0 5.28e-01 95.7% 90.3%
3htuA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 46.0 4.99e-01 79.8% 98.7%
3jamK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 48.0 4.82e-01 88.3% 82.3%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.60 47.0 4.68e-01 85.1% 83.2%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 4.21e-01 74.5% 80.0%
1zelA01 3.90.56.20 Alpha Beta › Alpha-Beta Complex › Phenol Hydroxylase P2 Protein › replication protein C, winged helix domain 0.54 41.0 4.12e-01 92.6% 79.6%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.53 43.0 4.18e-01 89.4% 87.4%
1aoyA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 38.0 4.08e-01 80.9% 93.6%
2o0bA01 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.52 41.0 3.27e-01 88.3% 88.0%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.51 34.0 3.43e-01 70.2% 67.0%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5067395 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.79 57.0 6.14e-01 80.9% 87.5%
5056155 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.78 57.0 5.59e-01 75.5% 72.0%
4939406 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 57.0 4.61e-01 77.7% 41.1%
3587362 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.78 59.0 5.09e-01 80.9% 53.2%
5051882 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.78 60.0 5.73e-01 81.9% 72.7%
3512683 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 52.0 6.08e-01 72.3% 100.0%
4955611 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.77 56.0 5.45e-01 76.6% 73.1%
4971941 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.77 55.0 6.12e-01 75.5% 96.0%
3602557 101.1.2.143 alpha arrays › HTH › HTH › winged helix domain › HTH_34 0.76 60.0 6.20e-01 84.0% 87.8%
4942548 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 60.0 5.08e-01 84.0% 55.3%
4944019 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 56.0 6.18e-01 78.7% 97.3%
5040871 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 53.0 5.72e-01 73.4% 88.7%
4937866 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 55.0 5.78e-01 77.7% 84.7%
5031076 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 55.0 5.10e-01 75.5% 65.2%
4944350 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 57.0 6.03e-01 79.8% 91.6%
5031078 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.75 54.0 5.36e-01 75.5% 75.0%
4964386 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 54.0 5.45e-01 75.5% 78.9%
4389399 101.1.2.304 alpha arrays › HTH › HTH › winged helix domain › E3_UFM1_ligase 0.75 48.0 5.46e-01 70.2% 87.1%
4937088 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 54.0 5.82e-01 75.5% 88.7%
3954543 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.75 58.0 4.98e-01 81.9% 57.3%
5013841 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.74 60.0 5.47e-01 97.9% 65.6%
5039584 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 56.0 6.03e-01 87.2% 93.8%
4967858 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 6.14e-01 86.2% 100.0%
4649222 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.73 57.0 5.07e-01 81.9% 59.2%
1109306 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.73 52.0 5.15e-01 77.7% 70.4%
3286901 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.73 60.0 5.66e-01 96.8% 74.5%
3971712 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.73 56.0 5.06e-01 83.0% 59.2%
5031515 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.73 60.0 6.02e-01 95.7% 87.4%
4994131 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 56.0 5.29e-01 80.9% 70.0%
3958894 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 50.0 5.24e-01 76.6% 78.8%
4949735 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.73 51.0 5.35e-01 77.7% 81.2%
5030252 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.73 57.0 5.65e-01 84.0% 82.0%
4613072 101.1.2.721 alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27113 0.73 57.0 4.71e-01 84.0% 52.7%
4955128 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.72 54.0 4.67e-01 78.7% 53.5%
4928469 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 51.0 5.45e-01 76.6% 86.3%
3247158 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 50.0 5.46e-01 71.3% 90.7%
4126575 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.72 54.0 4.70e-01 83.0% 51.7%
4929096 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.72 60.0 6.06e-01 95.7% 89.5%
4960116 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 58.0 5.90e-01 86.2% 90.0%
5033536 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 54.0 5.14e-01 79.8% 70.0%
4988782 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.72 58.0 5.60e-01 93.6% 77.1%
5038557 101.1.2.934 alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N 0.72 58.0 5.68e-01 95.7% 81.0%
4096608 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 5.88e-01 95.7% 87.4%
4970622 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 58.0 5.96e-01 95.7% 92.2%
4973217 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 54.0 5.67e-01 81.9% 90.6%
5028122 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.71 55.0 4.94e-01 83.0% 61.5%
4927802 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 59.0 4.94e-01 95.7% 53.1%
5053846 101.1.2.26 alpha arrays › HTH › HTH › winged helix domain › HxlR 0.71 55.0 5.73e-01 84.0% 90.6%
4401155 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 46.0 5.35e-01 76.6% 96.9%
4928531 101.1.2.728 alpha arrays › HTH › HTH › winged helix domain › PF31122 0.71 58.0 5.84e-01 95.7% 87.4%
4998355 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 5.05e-01 77.7% 74.3%
4959343 101.1.2.181 alpha arrays › HTH › HTH › winged helix domain › MCM_C 0.70 55.0 5.60e-01 83.0% 97.8%
5010717 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 50.0 5.54e-01 77.7% 93.3%
4961776 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 5.85e-01 95.7% 86.0%
5036041 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.51e-01 85.1% 82.1%
5035263 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.70 58.0 5.66e-01 95.7% 81.0%
3700393 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.70 48.0 3.69e-01 71.3% 31.6%
4968065 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 54.0 4.63e-01 84.0% 54.2%
2685 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 55.0 5.71e-01 85.1% 89.9%
5042455 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.69 57.0 5.25e-01 88.3% 71.4%
4928556 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 57.0 5.67e-01 96.8% 85.7%
5017587 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 55.0 5.76e-01 85.1% 92.9%
4939519 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.69 57.0 5.39e-01 88.3% 77.3%
5052010 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 5.65e-01 80.9% 98.8%
3782579 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.69 49.0 4.34e-01 84.0% 51.1%
3738688 101.1.2.68 alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc34 0.69 51.0 5.55e-01 80.9% 97.3%
3725361 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 53.0 5.42e-01 85.1% 84.4%
4938723 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.69 54.0 4.85e-01 84.0% 67.7%
5003455 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 54.0 4.57e-01 84.0% 54.8%
4967677 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.69 53.0 5.27e-01 83.0% 78.8%
4957831 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.68 54.0 4.46e-01 84.0% 53.3%
5010043 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.68 58.0 5.78e-01 95.7% 87.9%
5013384 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.68 53.0 4.54e-01 83.0% 57.3%
5036162 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 50.0 4.77e-01 77.7% 68.2%
5024801 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 58.0 5.42e-01 95.7% 75.7%
5046672 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 54.0 5.07e-01 86.2% 77.4%
5043914 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.68 61.0 4.95e-01 97.9% 55.3%
5077343 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 56.0 5.65e-01 95.7% 90.3%
4015761 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 55.0 5.52e-01 96.8% 88.4%
5075009 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 50.0 5.04e-01 79.8% 88.4%
3840297 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.66 59.0 4.57e-01 98.9% 47.8%
3464462 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 4.03e-01 86.2% 76.0%
3170419 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.65 45.0 3.86e-01 78.7% 44.7%
4028116 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.65 46.0 4.80e-01 81.9% 81.2%
5000528 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.65 54.0 5.55e-01 94.7% 96.7%
5034713 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 53.0 5.23e-01 96.8% 84.0%
3742536 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.65 45.0 3.97e-01 80.9% 48.6%
3794506 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.64 47.0 3.65e-01 83.0% 35.1%
3850850 101.1.2.197 alpha arrays › HTH › HTH › winged helix domain › APAF-1-like_WHD 0.64 51.0 5.37e-01 95.7% 96.5%
3268538 101.1.2.267 alpha arrays › HTH › HTH › winged helix domain › Nse4_C 0.63 43.0 4.09e-01 71.3% 57.4%
4939871 101.1.2.896 alpha arrays › HTH › HTH › winged helix domain › DUF2551 0.63 54.0 5.26e-01 95.7% 88.6%
3449294 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 51.0 4.52e-01 87.2% 81.5%
3380214 207.1.1.230 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › WHD_ROQ1 0.63 51.0 3.41e-01 95.7% 22.2%
3412689 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.62 53.0 4.91e-01 94.7% 84.2%
3730465 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.60 52.0 3.69e-01 98.9% 73.2%