Large_T

Euk-Vir

Betapolyomavirus_securanorvegicus

Large_T__YP_009325931__Betapolyomavirus_securanorvegicus__1919247

Identity

83.9 mean pLDDT

Shotokuvirae› Cossaviricota› Papovaviricetes› Sepolyvirales› Polyomaviridae› Betapolyomavirus› Betapolyomavirus_securanorvegicus

TaxID: 1919247

View cluster (129 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 215-337

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D167-268

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02217.23 best	T_Ag_DNA_bind	108.3	3.50e-31	72.4%	92.5%

D2 high residues 354-430

PDB

Domain cluster: rep: ORF01L__YP_009252373__Marbled_eel_polyomavirus__1662286__D415-505

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	83.0	2.90e-23	100.0%	17.3%

D3 medium residues 1-69

PDB

Domain cluster: rep: small_T_antigen__YP_007346980__Betapolyomavirus_ptedavyi__1891773__D7-77

D4 medium residues 431-477_624-701

PDB

Domain cluster: rep: large_T_antigen__YP_009115503__Adelie_penguin_polyomavirus__1590650__D403-422_572-647

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	69.4	3.90e-19	67.2%	19.7%

D5 medium residues 478-623

PDB

Domain cluster: rep: large_T_antigen__YP_009553187__Philantomba_monticola_polyomavirus_1__2170411__D436-450_495-593

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06431.17 best	Polyoma_lg_T_C	232.0	1.70e-68	100.0%	34.3%
PF00519.24	PPV_E1_C	29.4	6.50e-07	89.0%	36.0%