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Leader
Euk-Virbovine_rhinitis_B_virus_1
Leader__YP_001686937__bovine_rhinitis_B_virus_1__2758977
Identity
- Accession:
- YP_001686937 ↗
- Protein ID:
- Leader
- Kingdom:
- euk
Quality
75.3
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Picornavirales›
Picornaviridae›
Aphthovirus›
bovine_rhinitis_B_virus_1
TaxID: 2758977
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 49-206
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05408.18 best | Peptidase_C28 | 140.0 | 1.20e-40 | 98.7% | 71.6% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qmyA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.96 | 84.0 | 8.48e-01 | 89.2% | 91.0% |
| 5cvmA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.82 | 70.0 | 5.49e-01 | 89.9% | 99.0% |
| 3i3tA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.81 | 69.0 | 5.46e-01 | 89.9% | 99.3% |
| 3ihpA03 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.80 | 69.0 | 5.28e-01 | 90.5% | 97.6% |
| 4q8gA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.71 | 60.0 | 4.64e-01 | 89.9% | 87.8% |
| 2af5A01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.62 | 20.0 | 3.40e-01 | 70.9% | 83.3% |
| 6gfaA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.57 | 22.0 | 3.38e-01 | 78.5% | 91.1% |
| 2xi9B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 26.0 | 3.16e-01 | 76.6% | 69.2% |
| 2dk1A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.52 | 19.0 | 2.96e-01 | 88.0% | 92.0% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 19.0 | 2.91e-01 | 88.6% | 83.6% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1406097 | 219.1.1.30 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C28 | 0.96 | 86.0 | 8.58e-01 | 91.1% | 91.2% |
| 3911651 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.81 | 70.0 | 5.30e-01 | 90.5% | 96.6% |
| 3426676 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.81 | 70.0 | 5.26e-01 | 90.5% | 95.5% |
| 3485620 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.81 | 70.0 | 5.26e-01 | 89.9% | 98.3% |
| 3940432 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.81 | 69.0 | 4.95e-01 | 89.9% | 91.8% |
| None | — | 0.81 | 69.0 | 5.09e-01 | 89.2% | 90.1% | |
| 3529004 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.81 | 70.0 | 5.35e-01 | 90.5% | 97.6% |
| 3418449 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.81 | 69.0 | 4.91e-01 | 89.9% | 72.9% |
| 2773985 | 219.1.1.43 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CoV_peptidase | 0.81 | 69.0 | 5.82e-01 | 89.2% | 83.5% |
| 3652683 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.81 | 69.0 | 5.08e-01 | 89.9% | 95.1% |
| 4375667 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.81 | 68.0 | 4.86e-01 | 89.2% | 91.8% |
| 3800929 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.80 | 69.0 | 4.99e-01 | 90.5% | 97.3% |
| 3514586 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.80 | 69.0 | 5.01e-01 | 90.5% | 90.8% |
| 3329474 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.80 | 68.0 | 5.08e-01 | 89.9% | 89.8% |
| 4029285 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.80 | 69.0 | 4.99e-01 | 90.5% | 91.8% |
| 4029745 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.80 | 69.0 | 5.24e-01 | 90.5% | 95.6% |
| 3783065 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.80 | 68.0 | 5.09e-01 | 89.2% | 95.8% |
| 3787662 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.80 | 68.0 | 4.96e-01 | 89.9% | 92.8% |
| 3274671 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.80 | 68.0 | 5.03e-01 | 89.9% | 95.0% |
| 3940760 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.80 | 68.0 | 5.38e-01 | 90.5% | 97.4% |
| 3694580 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.79 | 68.0 | 5.00e-01 | 89.9% | 95.3% |
| 3271037 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.79 | 68.0 | 4.84e-01 | 89.9% | 98.1% |
| 3600457 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.79 | 68.0 | 5.21e-01 | 90.5% | 90.0% |
| 3928073 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.79 | 68.0 | 5.26e-01 | 89.9% | 94.7% |
| 3226036 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.79 | 68.0 | 5.12e-01 | 90.5% | 89.1% |
| 3903582 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.79 | 68.0 | 5.11e-01 | 89.9% | 99.2% |
| 3719044 | 219.1.1.112 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH, UCH_1 | 0.79 | 68.0 | 5.12e-01 | 90.5% | 89.4% |
| 3484542 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.79 | 67.0 | 5.21e-01 | 90.5% | 94.2% |
| 1680145 | 219.1.1.43 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CoV_peptidase | 0.78 | 68.0 | 5.65e-01 | 91.1% | 83.4% |
| 3993647 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.78 | 67.0 | 5.26e-01 | 90.5% | 95.9% |
| 3257853 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.78 | 67.0 | 5.31e-01 | 89.2% | 96.6% |
| 3711375 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.77 | 67.0 | 4.60e-01 | 90.5% | 67.6% |
| 3237895 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.77 | 66.0 | 5.11e-01 | 90.5% | 96.1% |
| 4263801 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.77 | 66.0 | 4.13e-01 | 89.9% | 35.7% |
| 3008562 | 219.1.1.43 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CoV_peptidase | 0.77 | 66.0 | 5.62e-01 | 91.1% | 82.7% |
| 3178434 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.76 | 65.0 | 4.95e-01 | 90.5% | 95.1% |
| 3463325 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.71 | 58.0 | 4.89e-01 | 85.4% | 100.0% |
| 4530314 | 375.13.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain | 0.59 | 19.0 | 3.24e-01 | 72.2% | 81.0% |
| 3427234 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 48.0 | 4.09e-01 | 89.2% | 99.2% |
| 1720153 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 20.0 | 3.31e-01 | 74.1% | 94.2% |
| 4112545 | 375.13.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Mycobacterium tuberculosis Topoisomerase I C-terminal domain › Toprim_C_rpt | 0.54 | 19.0 | 3.08e-01 | 71.5% | 89.1% |