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ME-53
Euk-VirLymantria_xylina_nucleopolyhedrovirus
ME-53__YP_003517761__Lymantria_xylina_nucleopolyhedrovirus__166921
Identity
- Accession:
- YP_003517761 ↗
- Protein ID:
- ME-53
- Kingdom:
- euk
Quality
78.8
mean pLDDT
Taxonomy
TaxID: 166921
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 40-169
Domain cluster:
rep: me53_protein__YP_007250543__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D109-237
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06061.17 best | Baculo_ME53 | 137.0 | 1.30e-39 | 100.0% | 38.5% |
D2
high
residues 179-272
Domain cluster:
rep: me-53__YP_009186707__Sucra_jujuba_nucleopolyhedrovirus__1563660__D191-238_262-289
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06061.17 best | Baculo_ME53 | 71.4 | 1.20e-19 | 100.0% | 30.6% |
D3
high
residues 290-368
Domain cluster:
rep: ME53__YP_009182323__Diatraea_saccharalis_granulovirus__1675862__D239-309
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06061.17 best | Baculo_ME53 | 82.5 | 5.00e-23 | 96.2% | 21.5% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5nqdA01 | 3.30.200.200 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.54 | 42.0 | 3.34e-01 | 84.8% | 52.3% |
| 7txnA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 36.0 | 3.50e-01 | 86.1% | 63.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4977168 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 38.0 | 3.67e-01 | 82.3% | 61.4% |
| 4678749 | 306.1.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › Glucose permease domain IIB › Glucose permease domain IIB | 0.55 | 30.0 | 3.29e-01 | 79.7% | 64.6% |
| 3856612 | 319.1.1.9 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DPCD | 0.52 | 44.0 | 3.40e-01 | 94.9% | 60.5% |
| 4652896 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.51 | 42.0 | 4.02e-01 | 96.2% | 96.8% |
| 4656735 | 3008.1.1.0 ↗ | a+b three layers › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › A subdomain in the anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.50 | 43.0 | 4.11e-01 | 100.0% | 98.9% |
| 5071343 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 38.0 | 3.69e-01 | 86.1% | 97.9% |