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ME53
Euk-VirAdoxophyes_orana_nucleopolyhedrovirus
ME53__YP_002300543__Adoxophyes_orana_nucleopolyhedrovirus__542343
Identity
- Accession:
- YP_002300543 ↗
- Protein ID:
- ME53
- Kingdom:
- euk
Quality
74.1
mean pLDDT
Taxonomy
TaxID: 542343
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-138
Domain cluster:
rep: me53_protein__YP_007250543__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D109-237
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06061.17 best | Baculo_ME53 | 95.1 | 7.40e-27 | 100.0% | 35.8% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2outA01 | 3.40.5.80 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.57 | 29.0 | 3.94e-01 | 72.9% | 100.0% |
| 1s6lA02 | 3.15.10.60 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Alkylmercury lyase | 0.54 | 41.0 | 4.06e-01 | 82.2% | 93.0% |
| 2fd4A00 | 3.30.40.110 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › AvrPtoB, C-terminal domain | 0.51 | 38.0 | 3.97e-01 | 84.7% | 85.7% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3578684 | 904.1.1.0 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain | 0.69 | 39.0 | 4.98e-01 | 87.3% | 100.0% |
| 3244228 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.68 | 35.0 | 4.73e-01 | 75.4% | 96.7% |
| 3883258 | 382.1.1.1 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › UPAR_LY6 | 0.56 | 35.0 | 4.24e-01 | 87.3% | 98.6% |
| 3878052 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.55 | 33.0 | 3.79e-01 | 82.2% | 81.2% |
| 3891071 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 33.0 | 4.09e-01 | 84.7% | 98.6% |
D2
medium
residues 153-208_232-261
Domain cluster:
rep: me-53__YP_009186707__Sucra_jujuba_nucleopolyhedrovirus__1563660__D191-238_262-289
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06061.17 best | Baculo_ME53 | 40.7 | 2.50e-10 | 75.6% | 16.1% |
D3
medium
residues 262-324