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ME53
Euk-VirDiatraea_saccharalis_granulovirus
ME53__YP_009182323__Diatraea_saccharalis_granulovirus__1675862
Identity
- Accession:
- YP_009182323 ↗
- Protein ID:
- ME53
- Kingdom:
- euk
Quality
83.7
mean pLDDT
Taxonomy
TaxID: 1675862
Cluster
View cluster (44 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-123
Domain cluster:
rep: me53_protein__YP_007250543__Thysanoplusia_orichalcea_nucleopolyhedrovirus__101850__D109-237
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06061.17 best | Baculo_ME53 | 38.4 | 1.30e-09 | 96.8% | 25.4% |
D2
high
residues 239-309
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vg8A00 | 3.30.200.270 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.57 | 48.0 | 4.30e-01 | 97.2% | 70.5% |
| 4if8B01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.52 | 36.0 | 2.48e-01 | 73.2% | 63.1% |
| 4v19R01 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.51 | 42.0 | 3.80e-01 | 100.0% | 94.6% |
| 1gd8A00 | 3.90.1030.10 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 | 0.50 | 41.0 | 3.78e-01 | 100.0% | 99.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3607007 | 306.5.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP | 0.58 | 41.0 | 3.52e-01 | 76.1% | 92.5% |
| 434772 | 3213.1.1.1 ↗ | a+b two layers › hypothetical protein TTHB210 › hypothetical protein TTHB210 › hypothetical protein TTHB210 › TTHB210-like | 0.56 | 47.0 | 4.06e-01 | 97.2% | 63.8% |
| 3559894 | 11.2.1.24 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › SPATA6 | 0.55 | 41.0 | 3.65e-01 | 78.9% | 94.0% |
| 2989469 | 11.1.1.847 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Unc5_NetrinR_N | 0.52 | 37.0 | 3.35e-01 | 77.5% | 87.9% |
| 4655771 | 230.2.1.2 ↗ | a+b two layers › T-fold › Ribosomal protein S3-C › Ribosomal protein S3-C › VAR1 | 0.52 | 43.0 | 3.64e-01 | 93.0% | 81.5% |
| 1146732 | 223.1.1.35 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 | 0.51 | 41.0 | 3.48e-01 | 93.0% | 75.2% |
| 3475848 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.43e-01 | 78.9% | 70.5% |
| 3806772 | 387.1.5.0 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like | 0.51 | 37.0 | 3.81e-01 | 78.9% | 90.8% |
| 3467677 | 10.1.1.58 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Neprosin | 0.50 | 35.0 | 2.66e-01 | 73.2% | 95.0% |
D3
medium
residues 127-182_198-238
Domain cluster:
rep: ME53__YP_009345870__Mythimna_unipuncta_granulovirus_B__2169746__D122-211