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MF001355.1__ASZ76509.1__X__00223

Bact-Vir

MF001355.1__ASZ76509.1__X__00223

Identity

Accession:
MF001355 ↗
Kingdom:
phage

Quality

75.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Bragavirus› Proteus_phage_PM2

TaxID: 2025809

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-61
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 61.0 6.32e-01 100.0% 90.0%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 59.0 6.15e-01 100.0% 88.2%
3goxA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 61.0 6.35e-01 100.0% 94.1%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 56.0 5.53e-01 100.0% 79.7%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 56.0 5.65e-01 100.0% 85.2%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 54.0 5.72e-01 96.4% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 53.0 5.06e-01 100.0% 70.3%
1ov3A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 61.0 6.12e-01 100.0% 98.2%
6bogA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.41e-01 100.0% 88.5%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 58.0 5.77e-01 100.0% 93.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 52.0 4.47e-01 100.0% 51.1%
6ghmC02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 60.0 5.72e-01 100.0% 89.1%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 59.0 5.84e-01 100.0% 93.2%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 5.14e-01 100.0% 82.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 58.0 5.19e-01 100.0% 69.6%
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 4.99e-01 100.0% 88.0%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.57e-01 100.0% 90.3%
2m0yA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 57.0 5.22e-01 100.0% 75.7%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 56.0 5.41e-01 100.0% 87.5%
2vknA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 54.0 5.21e-01 100.0% 84.8%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 49.0 4.86e-01 100.0% 81.7%
5f3yA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 54.0 4.89e-01 100.0% 79.2%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 55.0 4.84e-01 100.0% 78.3%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 49.0 3.76e-01 100.0% 35.5%
3ervA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 54.0 3.69e-01 100.0% 38.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 53.0 4.48e-01 100.0% 79.2%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 44.0 4.02e-01 100.0% 59.2%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.59 48.0 4.58e-01 100.0% 77.3%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.57 48.0 4.40e-01 100.0% 84.2%
4da2A01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 43.0 3.83e-01 90.9% 82.3%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 38.0 3.32e-01 100.0% 47.8%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5057234 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 59.0 5.47e-01 100.0% 62.9%
5000308 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.79 61.0 6.42e-01 100.0% 93.9%
3323530 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.78 70.0 6.66e-01 100.0% 84.6%
3882696 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.77 69.0 6.03e-01 100.0% 67.5%
4251669 4.1.1.76 ↗ beta barrels › SH3 › SH3 › SH3 › NdhO 0.74 65.0 6.05e-01 100.0% 90.0%
3503291 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.73 56.0 4.46e-01 100.0% 41.8%
3931805 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 56.0 5.78e-01 96.4% 94.0%
3550644 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.60e-01 100.0% 83.6%
3374228 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 64.0 6.24e-01 100.0% 91.7%
3398496 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.71 55.0 5.55e-01 100.0% 83.6%
4679625 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.48e-01 100.0% 80.0%
3244497 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.70 55.0 4.06e-01 100.0% 32.0%
4030603 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 60.0 5.68e-01 100.0% 79.4%
3778124 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 59.0 5.67e-01 100.0% 81.5%
3330943 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.70 53.0 5.35e-01 100.0% 83.6%
3928136 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.77e-01 100.0% 86.7%
3308545 4.1.1.140 ↗ beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.70 56.0 4.02e-01 90.9% 30.6%
5074039 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 60.0 5.49e-01 100.0% 76.0%
3495480 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 59.0 5.80e-01 100.0% 90.0%
3900236 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 59.0 5.83e-01 100.0% 93.3%
4184660 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 60.0 4.57e-01 100.0% 46.2%
3233461 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.93e-01 100.0% 93.3%
3905176 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 59.0 5.64e-01 100.0% 86.2%
5063003 4.1.1.120 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_16 0.68 57.0 5.36e-01 96.4% 94.3%
3616622 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.80e-01 100.0% 90.5%
3999509 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.12e-01 100.0% 65.6%
3998645 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 57.0 5.48e-01 100.0% 81.5%
3541996 102.1.1.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like 0.68 58.0 4.02e-01 100.0% 28.4%
3852545 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 52.0 5.08e-01 100.0% 76.7%
3665882 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.68 54.0 4.10e-01 100.0% 36.3%
3236054 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.68 57.0 5.26e-01 100.0% 72.0%
2890675 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 58.0 5.54e-01 100.0% 84.4%
3850131 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 58.0 5.12e-01 100.0% 65.9%
3230400 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 59.0 5.60e-01 100.0% 93.8%
3843554 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.68 59.0 5.48e-01 100.0% 80.0%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 54.0 5.15e-01 100.0% 75.4%
3590315 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 56.0 5.17e-01 100.0% 80.0%
3934192 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 57.0 5.54e-01 100.0% 86.7%
3575066 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 57.0 5.61e-01 100.0% 98.3%
3713613 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 5.52e-01 100.0% 87.7%
4937121 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.66 54.0 4.30e-01 100.0% 44.3%
4669027 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.65 56.0 3.72e-01 100.0% 24.6%
5008645 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.65 56.0 5.12e-01 100.0% 82.7%
4081631 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 56.0 5.12e-01 100.0% 74.7%
3627275 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 55.0 5.42e-01 98.2% 96.7%
3619619 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 54.0 5.01e-01 100.0% 72.9%
3514556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 53.0 4.94e-01 100.0% 72.9%
3294025 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 53.0 5.35e-01 94.5% 100.0%
5018743 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.64 53.0 4.91e-01 100.0% 82.7%
3770704 2.1.1.49 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MRP-S35 0.64 45.0 4.36e-01 72.7% 71.7%
3357709 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 55.0 4.77e-01 100.0% 74.1%
3249603 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 4.95e-01 100.0% 82.7%
3995388 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.61 53.0 4.15e-01 100.0% 52.5%
4048663 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.60 43.0 4.74e-01 100.0% 93.3%
3473499 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 51.0 4.12e-01 100.0% 51.3%
3516392 519.1.1.1 ↗ a+b two layers › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › mRNA decapping enzyme DcpS N-terminal domain › DcpS 0.55 37.0 2.98e-01 70.9% 77.4%
4230122 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.54 43.0 3.49e-01 100.0% 47.0%