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MF001358.1__ASZ76838.1__X__00172
Bact-VirMF001358.1__ASZ76838.1__X__00172
Identity
- Accession:
- MF001358 ↗
- Kingdom:
- phage
Quality
80.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-95
Domain cluster:
rep: IMGVR_UViG_3300021426_000003-3300021426-Ga0224482_10000072174__D426-500
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kvpA00 | 6.20.140.10 | Special › Other non-globular › Immunoglobulin-like › | 0.66 | 32.0 | 4.50e-01 | 78.5% | 100.0% |
| 4tl8F00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 44.0 | 3.41e-01 | 90.3% | 30.0% |
| 3jzmA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 48.0 | 3.56e-01 | 96.8% | 29.0% |
| 2kheA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.60 | 38.0 | 3.91e-01 | 75.3% | 67.4% |
| 2crfA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 42.0 | 3.84e-01 | 75.3% | 64.8% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 35.0 | 3.73e-01 | 71.0% | 68.4% |
| 1p5tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 41.0 | 3.94e-01 | 73.1% | 69.8% |
| 2otrA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.58 | 33.0 | 3.37e-01 | 93.5% | 56.7% |
| 4a8jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 46.0 | 3.32e-01 | 90.3% | 83.4% |
| 2jkbA02 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 48.0 | 3.25e-01 | 100.0% | 94.1% |
| 3hfqA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 2.98e-01 | 87.1% | 69.1% |
| 1hq0A00 | 3.60.100.10 | Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain | 0.54 | 46.0 | 3.28e-01 | 94.6% | 85.1% |
| 6btdA00 | 3.40.225.10 | Alpha Beta › 3-Layer(aba) Sandwich › L-fuculose-1-phosphate Aldolase › Class II aldolase/adducin N-terminal domain | 0.54 | 37.0 | 2.92e-01 | 93.5% | 33.0% |
| 8ew8A01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.53 | 41.0 | 3.14e-01 | 86.0% | 75.4% |
| 6igbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 3.05e-01 | 95.7% | 93.4% |
| 1wu7A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 43.0 | 3.24e-01 | 94.6% | 55.6% |
| 5z5dA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.58e-01 | 97.8% | 74.4% |
| 4gakA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 40.0 | 2.98e-01 | 83.9% | 81.6% |
| 6p2lA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 45.0 | 3.03e-01 | 100.0% | 96.0% |
| 3kg6C00 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.51 | 44.0 | 3.26e-01 | 100.0% | 81.9% |
| 4ydsA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 45.0 | 3.40e-01 | 97.8% | 88.5% |
| 2uvaG08 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.51 | 44.0 | 3.16e-01 | 98.9% | 78.5% |
| 1ri6A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 43.0 | 2.95e-01 | 93.5% | 95.2% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943410 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.67 | 50.0 | 3.76e-01 | 100.0% | 31.5% |
| 3998976 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.63 | 27.0 | 3.65e-01 | 76.3% | 80.0% |
| 5013748 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 46.0 | 3.58e-01 | 87.1% | 35.1% |
| 3589805 | 243.8.1.0 ↗ | a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein | 0.60 | 45.0 | 4.55e-01 | 78.5% | 78.9% |
| 5019857 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.59 | 38.0 | 2.94e-01 | 75.3% | 30.0% |
| 3169441 | 2004.1.1.128 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PAXNEB | 0.56 | 46.0 | 3.25e-01 | 89.2% | 85.7% |
| 4030708 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.56 | 48.0 | 2.92e-01 | 96.8% | 16.9% |
| 3882425 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.55 | 47.0 | 4.02e-01 | 95.7% | 81.6% |
| 3952595 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.55 | 35.0 | 2.90e-01 | 76.3% | 33.3% |
| 3972934 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.54 | 39.0 | 3.81e-01 | 78.5% | 67.6% |
| 4945226 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 44.0 | 3.08e-01 | 87.1% | 83.3% |
| 3905709 | 243.3.1.22 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cyto_heme_lyase | 0.54 | 44.0 | 3.64e-01 | 92.5% | 97.2% |
| 3872511 | 220.1.1.192 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_S11IP_C | 0.53 | 36.0 | 3.17e-01 | 100.0% | 46.4% |
| 5074978 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.53 | 45.0 | 3.09e-01 | 98.9% | 33.8% |
| 4206564 | 222.1.1.17 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N | 0.53 | 44.0 | 3.96e-01 | 94.6% | 96.3% |
| 4996906 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.52 | 44.0 | 3.23e-01 | 91.4% | 87.7% |
| 3705749 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 42.0 | 2.58e-01 | 89.2% | 62.8% |
| 4927100 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.52 | 36.0 | 3.75e-01 | 74.2% | 75.6% |
| 5066468 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.51 | 44.0 | 3.22e-01 | 96.8% | 88.7% |
| 4388251 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.51 | 45.0 | 3.06e-01 | 98.9% | 95.1% |
| 3385233 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 45.0 | 2.92e-01 | 100.0% | 83.1% |
| 4371091 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.51 | 43.0 | 2.96e-01 | 93.5% | 95.2% |
| 3512943 | 5.1.3.115 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_ATRN-LZTR1 | 0.50 | 44.0 | 3.03e-01 | 98.9% | 73.0% |
| 4880797 | 60.1.1.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Med25 | 0.50 | 40.0 | 3.58e-01 | 89.2% | 89.0% |