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MF001366.1__ASZ78197.1__X__00001
Bact-VirMF001366.1__ASZ78197.1__X__00001
Identity
- Accession:
- MF001366 ↗
- Kingdom:
- phage
Quality
79.7
mean pLDDT
Taxonomy
TaxID: 2025822
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-34
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ijdA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.63 | 42.0 | 4.38e-01 | 97.1% | 64.5% |
| 5t99A03 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.61 | 50.0 | 3.00e-01 | 100.0% | 93.5% |
| 3vpbA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.59 | 42.0 | 3.38e-01 | 100.0% | 36.2% |
| 1u9tA02 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.57 | 45.0 | 2.98e-01 | 100.0% | 30.2% |
| 2zyoA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.55 | 42.0 | 2.78e-01 | 100.0% | 68.9% |
| 1rm6A05 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.54 | 43.0 | 2.86e-01 | 100.0% | 47.4% |
| 1ye9A03 | 1.10.10.1060 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Catalase HPII, helical domain | 0.54 | 45.0 | 3.93e-01 | 100.0% | 68.4% |
| 3skvA02 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.53 | 44.0 | 2.84e-01 | 100.0% | 32.5% |
| 1rhdA01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.52 | 38.0 | 2.69e-01 | 100.0% | 21.8% |
| 2obpA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.11e-01 | 97.1% | 96.3% |
| 5by3A02 | 3.20.20.520 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosyl hydrolase family 115 | 0.50 | 41.0 | 2.44e-01 | 100.0% | 23.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3246060 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 42.0 | 4.44e-01 | 97.1% | 73.3% |
| None | — | 0.62 | 47.0 | 2.65e-01 | 82.4% | 37.4% | |
| 3416278 | 101.1.2.12 ↗ | alpha arrays › HTH › HTH › winged helix domain › DEP | 0.60 | 49.0 | 3.67e-01 | 97.1% | 35.8% |
| 4473128 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.60 | 50.0 | 4.09e-01 | 97.1% | 55.4% |
| 4645958 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.59 | 47.0 | 4.02e-01 | 94.1% | 58.3% |
| 3848064 | 576.1.1.1 ↗ | few secondary structure elements › Tetraspanin extracellular domain › Tetraspanin extracellular domain › Tetraspanin extracellular domain › Tetraspanin | 0.56 | 43.0 | 3.14e-01 | 88.2% | 58.0% |
| 3534897 | 109.4.1.1715 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_TANGO6 | 0.56 | 45.0 | 2.76e-01 | 100.0% | 16.7% |
| 3800826 | 1089.1.1.0 ↗ | a+b two layers › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain › Asparaginal-tRNA synthetase N-terminal domain | 0.55 | 42.0 | 3.56e-01 | 97.1% | 61.4% |
| 5023957 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.55 | 42.0 | 3.37e-01 | 91.2% | 93.8% |
| 3233908 | 2498.1.1.1 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M10 | 0.54 | 44.0 | 2.89e-01 | 100.0% | 97.0% |
| 3393465 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.52 | 41.0 | 3.06e-01 | 100.0% | 44.8% |
| 4937869 | 3414.1.1.0 ↗ | beta sandwiches › A putative surface protein › A putative surface protein › A putative surface protein | 0.52 | 37.0 | 2.80e-01 | 97.1% | 24.7% |
| 3170137 | 3525.1.1.1 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET | 0.51 | 40.0 | 3.50e-01 | 100.0% | 72.3% |
| 2725 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 38.0 | 3.11e-01 | 97.1% | 96.3% |
| 3596847 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 36.0 | 2.73e-01 | 79.4% | 87.6% |