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MF041990.1__ASD50598.1__X__00014
Bact-VirMF041990.1__ASD50598.1__X__00014
Identity
- Accession:
- MF041990 ↗
- Kingdom:
- phage
Quality
70.3
mean pLDDT
Taxonomy
TaxID: 2006921
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-85
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5mu3B00 | 3.40.50.12050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 47.0 | 3.82e-01 | 73.5% | 50.3% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 44.0 | 4.68e-01 | 100.0% | 77.0% |
| 1wp0A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.64 | 46.0 | 3.71e-01 | 74.7% | 82.5% |
| 2khdA00 | 3.30.70.860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 43.0 | 4.04e-01 | 96.4% | 59.3% |
| 2ftrA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 52.0 | 4.91e-01 | 100.0% | 78.6% |
| 3pm9A04 | 3.30.70.2740 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 47.0 | 4.69e-01 | 100.0% | 83.9% |
| 2ywwA01 | 3.30.70.140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain | 0.58 | 41.0 | 4.01e-01 | 100.0% | 67.0% |
| 4p4mA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.58 | 52.0 | 4.66e-01 | 100.0% | 95.7% |
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.57 | 33.0 | 3.48e-01 | 100.0% | 63.5% |
| 5gneA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.57 | 50.0 | 3.51e-01 | 100.0% | 39.5% |
| 2ltsA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 39.0 | 3.90e-01 | 71.1% | 88.4% |
| 6qpwA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 43.0 | 3.54e-01 | 81.9% | 71.9% |
| 4dzdA01 | 3.30.70.1200 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 1 | 0.56 | 36.0 | 3.83e-01 | 100.0% | 75.7% |
| 3gxwC00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 39.0 | 3.74e-01 | 73.5% | 97.0% |
| 4pxeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 49.0 | 4.45e-01 | 100.0% | 87.2% |
| 1nbeB01 | 3.30.70.140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aspartate carbamoyltransferase regulatory subunit, N-terminal domain | 0.56 | 39.0 | 3.82e-01 | 95.2% | 66.7% |
| 2kouA00 | 3.30.160.380 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Dicer dimerisation domain | 0.55 | 43.0 | 4.05e-01 | 84.3% | 90.2% |
| 4iw9B01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 43.0 | 4.08e-01 | 86.7% | 78.4% |
| 4w91B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 39.0 | 3.31e-01 | 74.7% | 74.6% |
| 1whnA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 42.0 | 4.02e-01 | 85.5% | 84.2% |
| 4ozjA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 42.0 | 3.94e-01 | 100.0% | 66.3% |
| 6f1uK02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.54 | 38.0 | 3.28e-01 | 74.7% | 86.9% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.54 | 48.0 | 4.18e-01 | 100.0% | 88.8% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.54 | 38.0 | 3.22e-01 | 74.7% | 87.1% |
| 2avxA00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.53 | 45.0 | 3.65e-01 | 96.4% | 85.4% |
| 1x23B00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.53 | 36.0 | 3.11e-01 | 73.5% | 73.7% |
| 1tkjA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 46.0 | 3.25e-01 | 100.0% | 37.5% |
| 3qwxX01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.53 | 38.0 | 3.51e-01 | 77.1% | 92.0% |
| 4bkwA03 | 3.30.500.40 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.52 | 39.0 | 3.49e-01 | 100.0% | 54.0% |
| 4djhA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 44.0 | 3.15e-01 | 98.8% | 49.5% |
| 1hh2P03 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.52 | 41.0 | 4.19e-01 | 96.4% | 92.4% |
| 6ztgA01 | 3.30.70.1070 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat | 0.52 | 37.0 | 3.83e-01 | 95.2% | 82.7% |
| 5mrvA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 45.0 | 3.07e-01 | 100.0% | 31.9% |
| 1nijA02 | 3.30.1220.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Yjia; Chain: A;domain 2 › CobW-like, C-terminal domain | 0.51 | 44.0 | 3.98e-01 | 98.8% | 71.6% |
| 3v38A00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.51 | 44.0 | 3.00e-01 | 100.0% | 31.0% |
| 3hlzA02 | 1.20.120.1090 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.50 | 45.0 | 3.91e-01 | 100.0% | 75.2% |
| 3cxjA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.50 | 42.0 | 3.56e-01 | 100.0% | 54.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4113985 | 304.44.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 | 0.68 | 54.0 | 5.38e-01 | 100.0% | 82.4% |
| 3384050 | 601.1.1.91 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF1218 | 0.65 | 47.0 | 3.67e-01 | 75.9% | 78.3% |
| 3967377 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.65 | 56.0 | 3.48e-01 | 97.6% | 27.5% |
| 3370517 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.65 | 53.0 | 4.36e-01 | 91.6% | 76.9% |
| 3238136 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.63 | 56.0 | 3.73e-01 | 100.0% | 46.6% |
| 3429951 | 5069.1.1.55 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › DUF1218 | 0.63 | 46.0 | 3.64e-01 | 77.1% | 83.5% |
| 3921243 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.62 | 50.0 | 2.99e-01 | 89.2% | 70.8% |
| 4503821 | 304.12.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 | 0.62 | 45.0 | 4.80e-01 | 100.0% | 91.4% |
| 3918382 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.62 | 50.0 | 3.04e-01 | 89.2% | 65.5% |
| 3280119 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.61 | 45.0 | 3.55e-01 | 100.0% | 36.7% |
| 3871823 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.61 | 49.0 | 3.04e-01 | 89.2% | 59.0% |
| 3783767 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.59 | 46.0 | 3.34e-01 | 86.7% | 63.7% |
| 3599395 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 47.0 | 3.11e-01 | 91.6% | 47.0% |
| 3937147 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.59 | 47.0 | 3.07e-01 | 86.7% | 89.5% |
| 3170708 | 632.1.1.6 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Pho88 | 0.59 | 41.0 | 3.39e-01 | 72.3% | 75.2% |
| 3405365 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.58 | 48.0 | 3.26e-01 | 95.2% | 66.6% |
| 3462190 | 3561.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 | 0.58 | 41.0 | 2.72e-01 | 74.7% | 18.8% |
| 3517153 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 38.0 | 3.94e-01 | 71.1% | 95.0% |
| 4620053 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 40.0 | 3.15e-01 | 74.7% | 61.7% |
| 4929322 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.56 | 48.0 | 4.54e-01 | 94.0% | 88.0% |
| 3935000 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.56 | 48.0 | 3.20e-01 | 98.8% | 54.2% |
| 3585113 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.56 | 48.0 | 3.95e-01 | 100.0% | 65.5% |
| 3943020 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.55 | 48.0 | 3.79e-01 | 96.4% | 87.4% |
| 3626407 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.55 | 38.0 | 4.11e-01 | 94.0% | 92.3% |
| 3239836 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.55 | 47.0 | 3.98e-01 | 100.0% | 74.0% |
| 3802552 | 601.1.1.91 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › DUF1218 | 0.55 | 38.0 | 3.13e-01 | 73.5% | 61.8% |
| None | — | 0.55 | 47.0 | 3.23e-01 | 100.0% | 49.4% | |
| 3480250 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.55 | 42.0 | 4.14e-01 | 84.3% | 92.2% |
| 3898704 | 304.151.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 | 0.55 | 42.0 | 4.12e-01 | 100.0% | 76.8% |
| 3774301 | 316.1.1.64 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › TUTase, MTPAP-like_central | 0.54 | 47.0 | 3.24e-01 | 100.0% | 33.7% |
| 3848891 | 304.151.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › PF29952 | 0.54 | 43.0 | 4.08e-01 | 100.0% | 74.0% |
| 3268603 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 46.0 | 4.43e-01 | 98.8% | 85.3% |
| 3766984 | 304.120.1.15 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › PF29952 | 0.53 | 42.0 | 4.09e-01 | 100.0% | 78.9% |
| 5072279 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.52 | 40.0 | 2.71e-01 | 86.7% | 52.6% |
| 5812 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 43.0 | 3.76e-01 | 91.6% | 70.3% |
| 3634448 | 6166.1.1.1 ↗ | alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 | 0.52 | 37.0 | 2.78e-01 | 74.7% | 93.6% |
| 4600982 | 327.6.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like | 0.52 | 40.0 | 4.21e-01 | 100.0% | 94.7% |
| 3716197 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 41.0 | 3.94e-01 | 100.0% | 75.0% |
| 3616729 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.51 | 45.0 | 4.20e-01 | 100.0% | 90.4% |
| 4645961 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.50 | 30.0 | 2.35e-01 | 95.2% | 25.8% |
| 3491344 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 29.0 | 2.89e-01 | 74.7% | 54.8% |