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MF041990.1__ASD50606.1__X__00022

Bact-Vir

MF041990.1__ASD50606.1__X__00022

Identity

Accession:
MF041990 ↗
Kingdom:
phage

Quality

78.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-70
PDB
Domain cluster: representative
CATH (51)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ei5A02 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.78 40.0 3.79e-01 78.3% 42.7%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.72 43.0 3.75e-01 84.1% 41.4%
3kvpA00 6.20.140.10 Special › Other non-globular › Immunoglobulin-like › 0.69 43.0 5.18e-01 79.7% 100.0%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.66 36.0 3.61e-01 78.3% 50.0%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 37.0 3.02e-01 79.7% 30.7%
2h1qA01 3.30.390.100 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.63 55.0 4.46e-01 95.7% 77.3%
2fjlA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 52.0 4.12e-01 97.1% 90.0%
1orvA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.58 48.0 2.89e-01 95.7% 13.2%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 3.65e-01 76.8% 88.2%
1hdhA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 45.0 4.34e-01 98.6% 75.3%
5m8cB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 2.95e-01 88.4% 21.5%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 38.0 3.77e-01 73.9% 66.2%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.57 47.0 3.38e-01 98.6% 32.5%
2w39A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 49.0 3.28e-01 100.0% 99.3%
3vsmA03 2.60.40.4340 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 42.0 3.76e-01 78.3% 83.0%
3au4A04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 50.0 4.55e-01 100.0% 81.7%
4mtnA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 42.0 4.34e-01 88.4% 87.3%
2rdgA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 40.0 4.03e-01 88.4% 74.6%
6phxA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.55 44.0 2.93e-01 89.9% 39.8%
3k0xA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 38.0 3.44e-01 75.4% 50.5%
1mi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 49.0 4.27e-01 98.6% 91.4%
1hxnA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.55 50.0 3.51e-01 100.0% 48.1%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 39.0 3.73e-01 75.4% 100.0%
7apkF01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 50.0 3.17e-01 100.0% 69.2%
2c35B02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 41.0 3.77e-01 81.2% 80.2%
3b77A01 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.54 48.0 4.23e-01 98.6% 74.0%
4gzuB03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 48.0 4.44e-01 100.0% 91.2%
4jhnD00 2.130.10.30 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II 0.54 48.0 3.05e-01 100.0% 74.4%
5wbyC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 49.0 3.15e-01 100.0% 88.2%
4eqaC00 2.40.128.650 Mainly Beta › Beta Barrel › Lipocalin › 0.54 43.0 3.38e-01 94.2% 40.7%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 47.0 3.97e-01 98.6% 84.6%
3afcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 49.0 2.91e-01 100.0% 89.0%
2xzhA00 2.130.10.110 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain 0.53 48.0 3.04e-01 100.0% 79.1%
5a35A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 46.0 3.93e-01 95.7% 98.2%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.53 45.0 4.03e-01 97.1% 76.2%
2jpiA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.53 33.0 2.99e-01 84.1% 45.8%
2edgA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 45.0 3.73e-01 97.1% 86.9%
2z1kA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 40.0 3.69e-01 79.7% 91.8%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 48.0 3.08e-01 100.0% 81.8%
4czxA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 48.0 3.03e-01 100.0% 82.1%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 48.0 2.86e-01 100.0% 92.2%
2ojhA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 46.0 3.08e-01 100.0% 85.2%
1xipA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 47.0 2.93e-01 100.0% 68.9%
3lp9A00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.52 46.0 3.20e-01 100.0% 51.1%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 39.0 3.72e-01 81.2% 77.1%
1k32A01 2.120.10.60 Mainly Beta › 6 Propeller › Neuraminidase › Tricorn protease N-terminal domain 0.51 45.0 3.04e-01 100.0% 90.1%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.51 46.0 3.30e-01 100.0% 74.9%
2j7qA00 3.90.70.120 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.51 44.0 3.10e-01 100.0% 70.1%
3eweA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 45.0 3.02e-01 98.6% 85.5%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 39.0 2.71e-01 88.4% 29.9%
3d33A00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 44.0 4.02e-01 98.6% 96.8%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3407060 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.82 52.0 3.87e-01 98.6% 27.3%
3858787 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.80 51.0 3.65e-01 98.6% 24.3%
3496077 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.79 50.0 3.58e-01 97.1% 23.3%
3623430 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.77 46.0 3.47e-01 97.1% 26.2%
3597338 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.74 52.0 3.61e-01 100.0% 24.4%
4079675 4959.1.1.1 a+b complex topology › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › first helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_3 0.71 38.0 3.28e-01 78.3% 33.0%
4302938 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.71 46.0 4.28e-01 98.6% 54.1%
3590950 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.66 44.0 3.28e-01 79.7% 30.3%
4999837 218.4.1.1 a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 0.60 43.0 3.82e-01 75.4% 74.0%
1406536 5.1.4.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.60 52.0 3.33e-01 94.2% 23.7%
3331918 12.3.1.38 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Rhamnogal_lyase 0.60 43.0 2.75e-01 75.4% 88.7%
3648139 5.1.5.75 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, ANAPC4_WD40 0.60 52.0 3.05e-01 92.8% 26.4%
3585370 5.1.3.112 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40_2 0.59 49.0 3.30e-01 88.4% 31.7%
4000029 5.1.4.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.59 49.0 3.09e-01 88.4% 23.4%
3266024 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 49.0 3.08e-01 88.4% 20.7%
4284025 206.1.2.4 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin 0.59 48.0 3.25e-01 89.9% 91.0%
5054848 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.59 46.0 4.10e-01 94.2% 59.0%
None 0.58 51.0 3.12e-01 94.2% 25.6%
3600254 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.58 53.0 3.83e-01 100.0% 76.8%
5043752 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 3.26e-01 89.9% 26.1%
3743437 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.58 42.0 3.04e-01 75.4% 87.4%
3739320 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.58 52.0 3.67e-01 100.0% 61.9%
3739291 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.58 50.0 3.17e-01 92.8% 29.2%
3360680 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.58 49.0 3.07e-01 92.8% 26.1%
3715861 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 2.86e-01 91.3% 21.8%
4026544 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 49.0 3.13e-01 91.3% 23.6%
3720204 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 49.0 2.89e-01 91.3% 20.7%
None 0.57 49.0 3.06e-01 92.8% 26.5%
3593313 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.57 52.0 3.74e-01 100.0% 72.1%
None 0.57 50.0 3.12e-01 95.7% 31.5%
None 0.57 49.0 3.27e-01 97.1% 73.9%
3277308 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 47.0 3.44e-01 89.9% 36.4%
3924872 5.1.4.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_2 0.57 49.0 3.28e-01 92.8% 60.8%
3337835 5.1.5.45 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN 0.57 49.0 3.47e-01 94.2% 48.5%
3684172 5.1.5.45 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PROPPIN 0.57 50.0 3.10e-01 95.7% 26.3%
4237069 295.1.1.12 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › UPF0231 0.56 46.0 3.73e-01 87.0% 50.0%
3582180 5.1.3.221 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_WDR36-Utp21_1st 0.56 48.0 3.55e-01 92.8% 49.1%
3599572 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 51.0 3.12e-01 100.0% 82.9%
3739527 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 51.0 3.17e-01 100.0% 85.0%
3740947 5.1.4.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.56 52.0 3.16e-01 100.0% 79.2%
3783345 5.1.4.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.55 51.0 3.26e-01 100.0% 79.0%
None 0.55 49.0 3.01e-01 98.6% 22.4%
3199835 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 49.0 4.85e-01 100.0% 97.3%
3920678 5.1.5.41 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_2 0.55 50.0 3.13e-01 100.0% 78.5%
3289559 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.54 47.0 3.05e-01 94.2% 92.0%
3185947 5.1.4.271 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 0.54 49.0 2.91e-01 100.0% 72.2%
3743943 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.54 49.0 2.97e-01 100.0% 83.6%
3738846 633.23.1.12 alpha bundles › Bromodomain-like › Claudin › Claudin › Fig1 0.54 49.0 3.48e-01 100.0% 67.5%
4011732 5.1.4.446 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, Beta-prop_WDR36-Utp21_2nd, Beta-prop_WDR36-Utp21_1st 0.54 48.0 2.71e-01 98.6% 12.0%
3205626 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 46.0 3.19e-01 92.8% 42.8%
4023386 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 48.0 3.23e-01 98.6% 41.2%
4989777 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 46.0 2.94e-01 94.2% 36.2%
3775455 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 48.0 2.71e-01 100.0% 62.3%
4012486 5.1.4.321 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30361 0.53 47.0 2.83e-01 100.0% 86.0%
None 0.52 48.0 2.70e-01 100.0% 63.0%
3866991 5.1.4.12 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.52 48.0 2.80e-01 100.0% 85.4%
3576278 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.52 47.0 2.89e-01 100.0% 83.7%
3915618 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 47.0 2.70e-01 100.0% 61.6%
3594271 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.52 46.0 3.03e-01 100.0% 93.4%
3257659 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 47.0 2.92e-01 100.0% 85.3%
3703725 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 46.0 2.74e-01 100.0% 62.3%
3286423 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 45.0 2.82e-01 98.6% 23.2%
3793797 5.1.5.93 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.51 45.0 2.93e-01 100.0% 82.5%