←Back to structures

MF041990.1__ASD50611.1__X__00027

Bact-Vir

MF041990.1__ASD50611.1__X__00027

Identity

Accession:
MF041990 ↗
Kingdom:
phage

Quality

92.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aliceevansviridae› Lactobacillus_phage_phiEF-1.1

TaxID: 2006921

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-48
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2iybE00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.89 59.0 5.25e-01 70.8% 51.6%
4jcjB01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.82 54.0 4.81e-01 70.8% 50.8%
1vx7000 2.30.170.20 Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 0.78 56.0 5.18e-01 77.1% 66.1%
4hi8B00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.69 53.0 4.68e-01 85.4% 80.6%
2dsmA00 3.30.40.30 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › YqaI domain 0.68 47.0 4.12e-01 72.9% 50.0%
1x62A01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.65 49.0 4.63e-01 85.4% 100.0%
2dj7A00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.64 55.0 4.73e-01 100.0% 81.2%
4hltA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 47.0 3.24e-01 81.2% 29.4%
2cuqA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.61 52.0 4.46e-01 100.0% 78.8%
2mbvA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.60 50.0 4.06e-01 95.8% 68.8%
1x68A00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.58 48.0 4.29e-01 100.0% 84.2%
2d8xA00 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.58 49.0 4.40e-01 100.0% 92.9%
1kgqA01 1.10.166.10 Mainly Alpha › Orthogonal Bundle › Tetrahydrodipicolinate-N-succinyltransferase; Chain A, domain 1 › Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain 0.50 33.0 2.96e-01 72.9% 45.7%
4cvnA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 36.0 2.51e-01 75.0% 83.2%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3373793 931.1.1.7 ↗ few secondary structure elements › Metallothionein › Metallothionein › Metallothionein › VATC 0.94 62.0 5.70e-01 70.8% 55.0%
3301457 931.1.1.7 ↗ few secondary structure elements › Metallothionein › Metallothionein › Metallothionein › VATC 0.94 65.0 7.55e-01 75.0% 100.0%
3544665 931.1.1.0 ↗ few secondary structure elements › Metallothionein › Metallothionein › Metallothionein 0.94 65.0 4.19e-01 75.0% 18.4%
3913254 931.1.1.7 ↗ few secondary structure elements › Metallothionein › Metallothionein › Metallothionein › VATC 0.93 61.0 7.05e-01 70.8% 94.3%
3238594 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.92 66.0 7.26e-01 77.1% 90.0%
3394481 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.89 65.0 7.15e-01 77.1% 92.5%
3584576 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.89 65.0 6.53e-01 77.1% 75.5%
5030292 931.1.1.0 ↗ few secondary structure elements › Metallothionein › Metallothionein › Metallothionein 0.86 58.0 6.57e-01 75.0% 97.1%
3221658 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.85 56.0 6.49e-01 70.8% 94.3%
3991863 376.1.2.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM 0.84 56.0 5.33e-01 70.8% 60.0%
3487870 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.78 51.0 5.58e-01 70.8% 82.5%
3492984 377.9.1.9 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › MYND_ZMYND11_ZMYD8 0.75 52.0 4.82e-01 79.2% 58.3%
3742454 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.74 50.0 5.66e-01 72.9% 97.1%
4940041 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.72 50.0 5.68e-01 72.9% 100.0%
3519190 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.72 51.0 5.27e-01 79.2% 80.0%
3573945 377.1.1.5 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › LIM 0.68 54.0 4.69e-01 89.6% 92.0%
8162 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.68 47.0 4.97e-01 79.2% 87.8%
3797387 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.67 46.0 4.79e-01 72.9% 80.0%
2403280 931.1.1.3 ↗ few secondary structure elements › Metallothionein › Metallothionein › Metallothionein › Metallothio_Pro 0.66 45.0 4.40e-01 70.8% 67.3%
4646980 377.1.1.17 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C4_ClpX 0.61 42.0 4.35e-01 72.9% 80.0%
3707608 101.1.17.0 ↗ alpha arrays › HTH › HTH › FF domain 0.56 42.0 3.38e-01 85.4% 69.0%
4024039 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 31.0 2.51e-01 97.9% 27.6%