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MF041990.1__ASD50636.1__X__00053
Bact-VirMF041990.1__ASD50636.1__X__00053
Identity
- Accession:
- MF041990 ↗
- Kingdom:
- phage
Quality
88.8
mean pLDDT
Taxonomy
TaxID: 2006921
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-88
Domain cluster:
rep: IMGVR_UViG_3300001784_000289-3300001784-JGI20225J20221_10000041414__D5-96
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18994.7 best | Prophage_tailD1 | 38.0 | 2.10e-09 | 96.5% | 98.8% |
CATH (60)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.78 | 69.0 | 5.41e-01 | 96.6% | 47.4% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.78 | 72.0 | 6.73e-01 | 100.0% | 88.7% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.74 | 64.0 | 6.24e-01 | 93.1% | 97.9% |
| 3cddA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.73 | 65.0 | 5.03e-01 | 96.6% | 48.9% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.73 | 64.0 | 5.12e-01 | 95.4% | 50.0% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.72 | 65.0 | 5.15e-01 | 98.9% | 72.1% |
| 8ct0B01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.70 | 63.0 | 5.06e-01 | 98.9% | 71.1% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.70 | 60.0 | 5.43e-01 | 98.9% | 69.2% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 62.0 | 5.33e-01 | 100.0% | 89.1% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.69 | 60.0 | 4.75e-01 | 95.4% | 52.9% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.67 | 57.0 | 5.07e-01 | 93.1% | 74.4% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 50.0 | 5.04e-01 | 85.1% | 80.2% |
| 4hh2B03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.66 | 48.0 | 4.62e-01 | 77.0% | 100.0% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 59.0 | 5.56e-01 | 100.0% | 88.6% |
| 1u8sA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.63 | 44.0 | 4.47e-01 | 82.8% | 73.8% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.63 | 43.0 | 4.22e-01 | 72.4% | 64.6% |
| 2nyiA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 41.0 | 4.30e-01 | 82.8% | 72.8% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.62 | 42.0 | 4.12e-01 | 87.4% | 62.9% |
| 5heeA00 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.62 | 45.0 | 3.22e-01 | 77.0% | 100.0% |
| 1qz8A01 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.62 | 52.0 | 4.88e-01 | 96.6% | 76.2% |
| 2g1dA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 47.0 | 4.56e-01 | 87.4% | 76.5% |
| 5is2A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 42.0 | 4.15e-01 | 88.5% | 70.3% |
| 1blxA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 46.0 | 4.58e-01 | 83.9% | 87.0% |
| 3mwbB03 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 44.0 | 4.29e-01 | 78.2% | 98.9% |
| 4qdjA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 44.0 | 3.30e-01 | 85.1% | 32.7% |
| 1zpvA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 41.0 | 4.22e-01 | 88.5% | 75.3% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 43.0 | 4.44e-01 | 86.2% | 82.9% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.58 | 50.0 | 4.74e-01 | 100.0% | 80.8% |
| 3esiA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 48.0 | 4.27e-01 | 88.5% | 77.4% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 37.0 | 3.92e-01 | 80.5% | 72.2% |
| 4rv9A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 44.0 | 3.39e-01 | 82.8% | 42.8% |
| 4i3gA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 45.0 | 4.13e-01 | 85.1% | 66.7% |
| 3wraA01 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.57 | 41.0 | 2.84e-01 | 75.9% | 91.1% |
| 3eeeA00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.56 | 48.0 | 3.78e-01 | 95.4% | 60.1% |
| 1golA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 43.0 | 3.80e-01 | 82.8% | 57.0% |
| 3mdyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 41.0 | 3.86e-01 | 96.6% | 62.7% |
| 3f62A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 4.03e-01 | 83.9% | 68.5% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 40.0 | 3.96e-01 | 87.4% | 72.8% |
| 7dl8C01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.55 | 43.0 | 4.27e-01 | 98.9% | 82.0% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 40.0 | 3.27e-01 | 87.4% | 40.6% |
| 1vq8S00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 41.0 | 4.28e-01 | 86.2% | 86.4% |
| 3wirA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.55 | 49.0 | 3.51e-01 | 100.0% | 82.7% |
| 5qinA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 41.0 | 4.16e-01 | 96.6% | 82.4% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.54 | 42.0 | 2.93e-01 | 83.9% | 41.9% |
| 1mruA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 42.0 | 4.13e-01 | 82.8% | 80.4% |
| 4noiA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.54 | 42.0 | 4.02e-01 | 85.1% | 71.8% |
| 2q7aA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 3.92e-01 | 98.9% | 65.1% |
| 2bolB02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 47.0 | 4.17e-01 | 98.9% | 96.9% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.74e-01 | 85.1% | 61.5% |
| 2yqzA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 40.0 | 3.15e-01 | 82.8% | 43.5% |
| 2ivfC00 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 40.0 | 3.09e-01 | 83.9% | 53.3% |
| 6mv2A01 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 40.0 | 3.86e-01 | 82.8% | 77.5% |
| 4eqmA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 39.0 | 3.93e-01 | 81.6% | 78.7% |
| 1g3pA02 | 3.90.450.1 | Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 | 0.52 | 37.0 | 3.58e-01 | 78.2% | 64.4% |
| 6u6pA01 | 3.30.1070.10 | Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › Cell division topological specificity factor MinE | 0.52 | 38.0 | 4.02e-01 | 78.2% | 100.0% |
| 1bdfA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.52 | 40.0 | 3.83e-01 | 85.1% | 69.8% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 39.0 | 3.68e-01 | 82.8% | 76.1% |
| 4e2aA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 38.0 | 3.07e-01 | 79.3% | 56.5% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.50 | 38.0 | 3.40e-01 | 83.9% | 58.6% |
| 1dj0A01 | 3.30.70.660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain | 0.50 | 37.0 | 3.26e-01 | 80.5% | 70.3% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.91 | 85.0 | 8.43e-01 | 98.9% | 97.8% |
| 4031786 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.88 | 79.0 | 8.02e-01 | 94.3% | 98.8% |
| 4883825 | 1.1.13.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Prophage_tailD1 | 0.88 | 83.0 | 8.17e-01 | 100.0% | 96.7% |
| 2475124 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.81 | 72.0 | 7.06e-01 | 95.4% | 96.8% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.79 | 73.0 | 6.40e-01 | 100.0% | 93.5% |
| 4954551 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.79 | 72.0 | 6.16e-01 | 98.9% | 85.2% |
| 5081561 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.78 | 66.0 | 6.87e-01 | 97.7% | 97.5% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.78 | 70.0 | 5.68e-01 | 100.0% | 78.7% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.77 | 66.0 | 6.06e-01 | 93.1% | 100.0% |
| 184486 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.76 | 62.0 | 6.39e-01 | 96.6% | 93.8% |
| 5056905 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.75 | 55.0 | 5.48e-01 | 87.4% | 74.4% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 66.0 | 6.40e-01 | 96.6% | 94.7% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.74 | 66.0 | 6.21e-01 | 97.7% | 100.0% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.73 | 60.0 | 5.30e-01 | 88.5% | 63.2% |
| 3968713 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.73 | 65.0 | 6.44e-01 | 96.6% | 93.3% |
| 4031205 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.73 | 65.0 | 4.98e-01 | 98.9% | 65.7% |
| 5002753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 62.0 | 6.29e-01 | 92.0% | 97.6% |
| 4482805 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.73 | 65.0 | 4.98e-01 | 98.9% | 64.6% |
| 3816023 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.71 | 48.0 | 4.99e-01 | 82.8% | 75.0% |
| 3973341 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 63.0 | 6.37e-01 | 95.4% | 97.6% |
| 3237442 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 57.0 | 5.47e-01 | 94.3% | 76.0% |
| 3243970 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.70 | 57.0 | 5.49e-01 | 95.4% | 77.0% |
| 3325750 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.70 | 46.0 | 4.79e-01 | 80.5% | 72.5% |
| 3675774 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.70 | 48.0 | 4.86e-01 | 82.8% | 71.8% |
| 3824912 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.70 | 47.0 | 4.92e-01 | 81.6% | 75.0% |
| 1914511 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.70 | 60.0 | 5.27e-01 | 98.9% | 64.6% |
| 4952430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 61.0 | 5.70e-01 | 98.9% | 88.2% |
| 3367471 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.69 | 42.0 | 4.61e-01 | 74.7% | 75.7% |
| 4638008 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.69 | 48.0 | 4.30e-01 | 72.4% | 98.3% |
| 3659065 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.69 | 52.0 | 5.01e-01 | 85.1% | 70.0% |
| 3826658 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.69 | 48.0 | 4.94e-01 | 85.1% | 75.3% |
| 5002662 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 59.0 | 5.61e-01 | 93.1% | 86.0% |
| 2877144 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.68 | 57.0 | 3.89e-01 | 90.8% | 28.5% |
| 3970830 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 60.0 | 5.74e-01 | 96.6% | 92.0% |
| 1320672 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.67 | 57.0 | 4.06e-01 | 93.1% | 35.4% |
| 3317802 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.67 | 48.0 | 4.67e-01 | 85.1% | 68.4% |
| 4036849 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.67 | 60.0 | 5.18e-01 | 98.9% | 66.2% |
| 3312923 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.67 | 47.0 | 4.64e-01 | 86.2% | 68.4% |
| 3688711 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.66 | 57.0 | 5.29e-01 | 95.4% | 80.0% |
| 4948780 | 2003.1.5.46 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › MTS | 0.66 | 49.0 | 3.73e-01 | 86.2% | 35.1% |
| 3825541 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.65 | 51.0 | 4.68e-01 | 85.1% | 65.5% |
| 3345132 | 304.8.1.45 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant | 0.65 | 44.0 | 4.10e-01 | 83.9% | 53.9% |
| 4952364 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.65 | 48.0 | 4.92e-01 | 89.7% | 82.4% |
| 4201044 | 304.109.1.10 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › PF27137 | 0.64 | 57.0 | 5.09e-01 | 97.7% | 81.7% |
| 3284562 | 304.8.1.9 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 | 0.64 | 43.0 | 4.42e-01 | 90.8% | 71.8% |
| 3639132 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.64 | 57.0 | 4.63e-01 | 100.0% | 73.3% |
| 3369744 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 47.0 | 4.31e-01 | 85.1% | 60.0% |
| 3450619 | 304.54.1.0 ↗ | a+b two layers › Alpha-beta plaits › CcmK-like › CcmK-like | 0.62 | 48.0 | 4.60e-01 | 83.9% | 71.0% |
| 3895201 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.62 | 44.0 | 3.95e-01 | 85.1% | 52.0% |
| 1844314 | 2012.1.1.2 ↗ | a/b three-layered sandwiches › LigB-like › LigB-like › LigB-like › LigB | 0.62 | 45.0 | 3.22e-01 | 77.0% | 100.0% |
| 4015799 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.61 | 46.0 | 3.24e-01 | 87.4% | 25.5% |
| 5057874 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.61 | 48.0 | 3.63e-01 | 83.9% | 46.3% |
| 4970307 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.60 | 49.0 | 4.45e-01 | 87.4% | 69.6% |
| 3271184 | 314.1.1.6 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › BPL_LplA_LipB | 0.60 | 48.0 | 3.54e-01 | 87.4% | 62.1% |
| 4976915 | 1.1.7.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ribosomal_L35Ae | 0.60 | 49.0 | 4.75e-01 | 92.0% | 79.6% |
| 3184468 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.60 | 46.0 | 3.14e-01 | 86.2% | 24.1% |
| 4982756 | 304.102.1.2 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruD | 0.59 | 45.0 | 3.57e-01 | 82.8% | 93.7% |
| 4304504 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.59 | 43.0 | 4.13e-01 | 77.0% | 86.0% |
| 3993006 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 46.0 | 3.13e-01 | 83.9% | 44.9% |
| 3652778 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.58 | 46.0 | 3.09e-01 | 87.4% | 43.4% |
| 3220081 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.57 | 43.0 | 3.13e-01 | 82.8% | 33.2% |
| 5029901 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.56 | 44.0 | 3.37e-01 | 82.8% | 47.9% |
| 3923792 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 44.0 | 3.09e-01 | 85.1% | 43.8% |
| 4029397 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.56 | 44.0 | 3.01e-01 | 86.2% | 41.2% |
| 4439630 | 76.1.1.1 ↗ | beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Endotoxin_M | 0.56 | 39.0 | 3.13e-01 | 73.6% | 95.6% |
| 4137463 | 325.1.7.8 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RnfC_N | 0.55 | 40.0 | 4.15e-01 | 77.0% | 92.5% |
| 4672169 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.55 | 40.0 | 3.01e-01 | 79.3% | 55.5% |
| 4219826 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.54 | 41.0 | 3.06e-01 | 82.8% | 56.9% |
| 4330191 | 304.102.1.0 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase | 0.54 | 40.0 | 3.17e-01 | 80.5% | 57.1% |
| 4266150 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.54 | 38.0 | 2.85e-01 | 74.7% | 56.5% |
| 3551813 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 42.0 | 2.81e-01 | 85.1% | 35.1% |
| 3714441 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 43.0 | 2.92e-01 | 86.2% | 44.3% |
| 3197822 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 43.0 | 2.75e-01 | 86.2% | 43.5% |
| 5082266 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.53 | 39.0 | 2.96e-01 | 80.5% | 47.8% |
| 4069712 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.53 | 41.0 | 3.21e-01 | 88.5% | 37.0% |
| 4569317 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.53 | 38.0 | 2.82e-01 | 75.9% | 56.1% |
| 4475204 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.53 | 39.0 | 2.90e-01 | 80.5% | 55.8% |
| 4246888 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.53 | 39.0 | 2.91e-01 | 80.5% | 46.4% |
| 4337358 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.52 | 39.0 | 2.90e-01 | 80.5% | 53.5% |
| 4369841 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.52 | 38.0 | 2.91e-01 | 80.5% | 56.7% |
| 4451796 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.52 | 39.0 | 2.94e-01 | 82.8% | 56.2% |
| 4325674 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.52 | 38.0 | 2.86e-01 | 81.6% | 80.0% |
| 4550789 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.52 | 38.0 | 2.89e-01 | 80.5% | 56.3% |
| 3588477 | 304.31.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › HMG-CoA_red | 0.52 | 35.0 | 3.32e-01 | 70.1% | 64.5% |
| 3350908 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.52 | 38.0 | 2.83e-01 | 80.5% | 52.2% |
| 4292769 | 304.4.1.47 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › SchA_CurD | 0.52 | 36.0 | 3.34e-01 | 73.6% | 57.3% |
| 4997642 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 40.0 | 2.83e-01 | 83.9% | 37.0% |
| 4304256 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.51 | 38.0 | 2.87e-01 | 80.5% | 56.6% |
| 4546316 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.51 | 39.0 | 2.92e-01 | 98.9% | 32.0% |
D2
high
residues 95-164
Domain cluster:
rep: OP142323.1__UVD33254.1__X__00017__D443-515
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26674.1 best | Prophage_tail_N2 | 43.5 | 4.80e-11 | 98.6% | 91.9% |
D3
high
residues 404-590
Domain cluster:
rep: term1_saliva_scaffold_14_prodigal-single.1__X__X__00263__D156-334
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01183.27 best | Glyco_hydro_25 | 62.5 | 9.10e-17 | 94.1% | 92.2% |
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ww5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.89 | 85.0 | 8.22e-01 | 97.9% | 99.0% |
| 4kruA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.88 | 85.0 | 8.07e-01 | 100.0% | 90.2% |
| 1jfxA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.87 | 84.0 | 7.87e-01 | 100.0% | 96.3% |
| 4jz5A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.86 | 83.0 | 8.00e-01 | 100.0% | 96.1% |
| 2wagA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.86 | 83.0 | 7.79e-01 | 100.0% | 93.1% |
| 2nw0A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.86 | 81.0 | 8.13e-01 | 100.0% | 97.4% |
| 5a6sA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.86 | 83.0 | 8.18e-01 | 100.0% | 97.4% |
| 1sfsA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.81 | 77.0 | 7.32e-01 | 100.0% | 97.7% |
| 2dskA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.73 | 67.0 | 5.70e-01 | 98.9% | 95.3% |
| 3l23A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.72 | 67.0 | 5.82e-01 | 100.0% | 88.3% |
| 1bqcA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.71 | 66.0 | 5.55e-01 | 100.0% | 92.1% |
| 2uy2A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.70 | 64.0 | 5.52e-01 | 97.9% | 97.6% |
| 7pd2B01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.70 | 64.0 | 5.15e-01 | 98.9% | 80.1% |
| 2hisA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.69 | 61.0 | 5.11e-01 | 94.1% | 77.9% |
| 3kp1A01 | 3.20.20.440 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › D-Lysine 5,6-aminomutase alpha subunit | 0.69 | 62.0 | 4.82e-01 | 97.9% | 68.8% |
| 1ad1A00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.68 | 62.0 | 5.53e-01 | 97.9% | 94.7% |
| 2q02A00 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.67 | 62.0 | 5.47e-01 | 100.0% | 86.8% |
| 4us5C00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.67 | 61.0 | 5.00e-01 | 98.4% | 90.7% |
| 1fdyB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.67 | 61.0 | 5.20e-01 | 97.9% | 73.9% |
| 1uumA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.66 | 61.0 | 4.89e-01 | 98.4% | 82.6% |
| 7xg9A01 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.66 | 59.0 | 5.12e-01 | 96.3% | 85.2% |
| 6hq7B02 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.66 | 57.0 | 5.08e-01 | 92.0% | 89.2% |
| 4uwmA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.65 | 59.0 | 4.77e-01 | 98.4% | 90.1% |
| 3n2oA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.65 | 57.0 | 4.97e-01 | 94.1% | 90.1% |
| 1f6yA00 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.65 | 60.0 | 5.35e-01 | 98.9% | 94.6% |
| 3qtgA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.65 | 59.0 | 5.44e-01 | 98.4% | 86.7% |
| 2r6oA00 | 3.20.20.450 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain | 0.65 | 56.0 | 5.03e-01 | 92.0% | 88.4% |
| 1b5tA00 | 3.20.20.220 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › | 0.65 | 59.0 | 5.14e-01 | 97.9% | 97.5% |
| 1lucA00 | 3.20.20.30 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain | 0.64 | 59.0 | 4.88e-01 | 100.0% | 90.5% |
| 2p8bA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.64 | 57.0 | 5.32e-01 | 97.3% | 89.4% |
| 3l12B00 | 3.20.20.190 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphatidylinositol (PI) phosphodiesterase | 0.63 | 59.0 | 5.02e-01 | 100.0% | 95.3% |
| 2hzgA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.63 | 59.0 | 5.33e-01 | 100.0% | 78.6% |
| 1sfjB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 57.0 | 5.28e-01 | 97.3% | 95.7% |
| 1knwA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.63 | 56.0 | 5.06e-01 | 94.1% | 93.9% |
| 2uvaG04 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.63 | 57.0 | 4.89e-01 | 97.9% | 82.0% |
| 5k9xA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 55.0 | 4.95e-01 | 96.8% | 90.0% |
| 3rr1B02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.62 | 56.0 | 5.18e-01 | 97.9% | 92.8% |
| 2rdmA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 36.0 | 4.29e-01 | 85.6% | 93.5% |
| 3gc6A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 34.0 | 4.29e-01 | 80.2% | 98.2% |
| 3kp1A04 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.56 | 42.0 | 4.68e-01 | 100.0% | 97.3% |
| 3e48A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 45.0 | 4.58e-01 | 98.4% | 87.4% |
| 2xkbL00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.55 | 46.0 | 3.71e-01 | 91.4% | 66.8% |
| 5tdeA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.55 | 42.0 | 4.26e-01 | 80.7% | 93.1% |
| 6hxqB01 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.54 | 42.0 | 4.42e-01 | 96.8% | 90.1% |
| 4bj1A02 | 3.40.50.12060 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 39.0 | 4.34e-01 | 84.5% | 94.6% |
| 3cb2B01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.53 | 48.0 | 4.33e-01 | 98.9% | 94.3% |
| 3zokA01 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 40.0 | 4.17e-01 | 89.3% | 85.1% |
| 2e4uA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 42.0 | 4.39e-01 | 98.4% | 95.4% |
| 3dmyA03 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.52 | 41.0 | 4.37e-01 | 97.9% | 95.7% |
| 1pujA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 39.0 | 4.22e-01 | 94.1% | 93.6% |
| 3h2zA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 38.0 | 3.79e-01 | 77.0% | 99.0% |
| 4evsA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 41.0 | 4.32e-01 | 94.1% | 94.2% |
| 1cvrA01 | 3.40.50.10390 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Gingipain r; domain 1 | 0.51 | 29.0 | 3.59e-01 | 79.7% | 88.9% |
| 5fbhA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 44.0 | 4.48e-01 | 98.4% | 96.3% |
| 3eafA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 42.0 | 4.29e-01 | 94.1% | 94.4% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1826179 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.89 | 85.0 | 7.77e-01 | 97.9% | 87.0% |
| 1290373 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.88 | 85.0 | 8.13e-01 | 100.0% | 92.8% |
| 5064016 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.88 | 85.0 | 8.26e-01 | 100.0% | 99.5% |
| 3283842 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.87 | 84.0 | 8.13e-01 | 100.0% | 98.5% |
| 4009663 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.87 | 84.0 | 7.67e-01 | 100.0% | 84.7% |
| 3262777 | 2002.1.1.290 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 | 0.86 | 82.0 | 7.84e-01 | 98.9% | 96.7% |
| 3257627 | 2002.1.1.290 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 | 0.86 | 82.0 | 7.82e-01 | 98.9% | 97.1% |
| 1284139 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.86 | 83.0 | 8.07e-01 | 100.0% | 98.0% |
| 135340 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.86 | 83.0 | 7.79e-01 | 100.0% | 93.1% |
| 3288451 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.86 | 83.0 | 7.61e-01 | 100.0% | 88.6% |
| 4378000 | 2002.1.1.290 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 | 0.85 | 80.0 | 7.88e-01 | 97.9% | 100.0% |
| 3616055 | 2002.1.1.290 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 | 0.85 | 81.0 | 7.62e-01 | 99.5% | 96.8% |
| 3270479 | 2002.1.1.290 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 | 0.85 | 80.0 | 7.71e-01 | 97.3% | 95.6% |
| 3215997 | 2002.1.1.290 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PF31264 | 0.85 | 81.0 | 7.50e-01 | 98.9% | 91.6% |
| 3983359 | 2002.1.1.55 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_25 | 0.85 | 66.0 | 7.10e-01 | 79.1% | 98.8% |
| 4978099 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.78 | 73.0 | 5.87e-01 | 98.9% | 98.2% |
| 3286993 | 2002.1.1.157 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Rv2525c_GlyHyd-like | 0.77 | 73.0 | 7.25e-01 | 100.0% | 97.4% |
| 4461910 | 2002.1.1.89 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_26 | 0.76 | 67.0 | 5.73e-01 | 93.6% | 90.9% |
| 3943155 | 2002.1.1.151 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_53 | 0.75 | 70.0 | 5.47e-01 | 100.0% | 81.1% |
| 140456 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.73 | 68.0 | 5.88e-01 | 100.0% | 84.3% |
| 3388919 | 2002.1.1.185 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_99 | 0.72 | 67.0 | 5.34e-01 | 100.0% | 98.9% |
| 3439933 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.70 | 65.0 | 5.77e-01 | 100.0% | 92.1% |
| 4521973 | 2002.1.1.158 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Lys-AminoMut_A | 0.70 | 63.0 | 4.58e-01 | 97.9% | 55.7% |
| 4104846 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.69 | 61.0 | 4.62e-01 | 94.1% | 57.5% |
| 4971179 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.69 | 63.0 | 5.14e-01 | 98.9% | 85.1% |
| 3988074 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.69 | 61.0 | 5.50e-01 | 96.8% | 97.7% |
| 4984185 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.68 | 63.0 | 5.69e-01 | 100.0% | 89.0% |
| 5064690 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.68 | 62.0 | 5.43e-01 | 96.8% | 94.4% |
| 321576 | 2002.1.1.60 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 | 0.68 | 62.0 | 5.48e-01 | 100.0% | 86.8% |
| 1314517 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.66 | 61.0 | 5.02e-01 | 98.4% | 91.1% |
| 4975105 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.66 | 55.0 | 5.10e-01 | 87.2% | 71.3% |
| 139338 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.66 | 59.0 | 4.77e-01 | 98.4% | 89.9% |
| 4638998 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.66 | 60.0 | 4.91e-01 | 98.9% | 88.8% |
| 3953468 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.65 | 61.0 | 4.72e-01 | 100.0% | 80.5% |
| 143463 | 2002.1.1.36 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Pterin_bind | 0.65 | 60.0 | 5.35e-01 | 100.0% | 99.2% |
| 3285953 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.65 | 59.0 | 4.90e-01 | 100.0% | 89.3% |
| 3977388 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.65 | 60.0 | 4.87e-01 | 98.9% | 89.9% |
| 3957811 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.65 | 54.0 | 5.10e-01 | 87.7% | 95.0% |
| 4346960 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.64 | 58.0 | 5.20e-01 | 96.8% | 83.5% |
| 4591130 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.64 | 59.0 | 4.76e-01 | 100.0% | 91.0% |
| 4030278 | 2002.1.1.11 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PK | 0.64 | 58.0 | 4.87e-01 | 97.9% | 89.0% |
| 4031077 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.64 | 59.0 | 4.82e-01 | 100.0% | 92.5% |
| 4947856 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.63 | 58.0 | 4.79e-01 | 100.0% | 83.5% |
| 5029110 | 2002.1.1.66 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I | 0.62 | 56.0 | 5.24e-01 | 96.3% | 84.9% |
| 3969585 | 2002.1.1.106 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD | 0.62 | 58.0 | 5.34e-01 | 100.0% | 95.7% |
| 5055755 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.62 | 55.0 | 4.53e-01 | 96.8% | 85.6% |
| 3952798 | 2002.1.1.121 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,Mob_synth_C | 0.62 | 55.0 | 4.53e-01 | 96.8% | 78.2% |
| 3164257 | 2002.1.1.111 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI | 0.61 | 56.0 | 4.81e-01 | 98.9% | 95.9% |
| 3976992 | 2002.1.1.300 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI, C-C_Bond_Lyase | 0.61 | 55.0 | 4.72e-01 | 98.4% | 76.6% |
| 4933100 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.60 | 52.0 | 4.44e-01 | 93.6% | 77.9% |
| 3220943 | 207.1.1.127 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › PHA-1 | 0.57 | 46.0 | 3.56e-01 | 85.0% | 65.2% |
| 5053565 | 2007.1.3.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › UPF0004 | 0.56 | 37.0 | 4.18e-01 | 90.4% | 85.5% |
| 3520734 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 41.0 | 4.42e-01 | 92.0% | 92.5% |
| 4987171 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.53 | 44.0 | 4.63e-01 | 95.7% | 97.6% |
| 5004060 | 7592.1.1.3 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › DUF6293_N | 0.53 | 33.0 | 3.89e-01 | 86.1% | 86.7% |
| 4944997 | 2004.1.1.16 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf | 0.52 | 46.0 | 4.68e-01 | 94.7% | 97.8% |
| 3779769 | 2003.1.6.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Misat_Tub_SegII+Tubulin_3 | 0.52 | 47.0 | 4.08e-01 | 97.9% | 90.9% |
| 5044778 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.52 | 47.0 | 4.09e-01 | 99.5% | 96.2% |
| 3343676 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.52 | 30.0 | 3.83e-01 | 92.0% | 99.0% |
| 5055287 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.52 | 47.0 | 3.93e-01 | 100.0% | 85.5% |
| 5000721 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.52 | 47.0 | 4.08e-01 | 99.5% | 97.6% |
| 3232001 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.52 | 45.0 | 3.40e-01 | 96.3% | 69.1% |
| 3856050 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.51 | 45.0 | 4.51e-01 | 98.4% | 95.3% |
| 3518602 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.51 | 42.0 | 4.32e-01 | 96.8% | 94.4% |
| 4948726 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.51 | 35.0 | 4.04e-01 | 96.8% | 97.8% |
| 3440281 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.51 | 45.0 | 4.53e-01 | 98.9% | 95.3% |
| 3587108 | 2005.1.1.72 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › PF30635 | 0.51 | 35.0 | 4.00e-01 | 83.4% | 94.3% |
| 4943418 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.50 | 46.0 | 4.24e-01 | 99.5% | 95.4% |
| 4971828 | 7592.1.1.6 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › Csa3_N | 0.50 | 36.0 | 4.07e-01 | 95.2% | 96.4% |
| 5069404 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.50 | 45.0 | 4.02e-01 | 100.0% | 88.9% |
| 4982945 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.50 | 45.0 | 3.96e-01 | 99.5% | 96.6% |
| 3841401 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.50 | 43.0 | 4.41e-01 | 98.9% | 96.2% |
| 3801927 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.50 | 44.0 | 4.35e-01 | 98.9% | 88.5% |
| 4030910 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.50 | 41.0 | 3.90e-01 | 87.2% | 92.4% |
| 3601530 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.50 | 45.0 | 3.97e-01 | 97.9% | 91.6% |
| 3542657 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.50 | 44.0 | 4.38e-01 | 96.8% | 99.5% |
| 3492911 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.50 | 42.0 | 4.33e-01 | 98.4% | 96.1% |
D4
medium
residues 174-191_264-329
Domain cluster:
rep: IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074338__D532-550_611-692
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06605.19 best | Prophage_tail | 34.2 | 3.60e-08 | 91.7% | 43.5% |
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dt4A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.76 | 48.0 | 5.67e-01 | 76.2% | 94.7% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.71 | 64.0 | 4.98e-01 | 97.6% | 47.7% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.70 | 43.0 | 5.08e-01 | 77.4% | 91.2% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.70 | 63.0 | 6.11e-01 | 100.0% | 93.7% |
| 1vhkA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.69 | 54.0 | 5.75e-01 | 98.8% | 94.5% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.68 | 58.0 | 4.59e-01 | 98.8% | 47.0% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.67 | 57.0 | 5.57e-01 | 100.0% | 83.9% |
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 59.0 | 5.02e-01 | 100.0% | 89.1% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 54.0 | 5.07e-01 | 100.0% | 72.1% |
| 2pmzB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.66 | 52.0 | 4.53e-01 | 84.5% | 93.5% |
| 4j3cA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.65 | 47.0 | 5.24e-01 | 100.0% | 100.0% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 40.0 | 4.33e-01 | 88.1% | 73.9% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 35.0 | 3.47e-01 | 96.4% | 48.4% |
| 4uhvA01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.64 | 56.0 | 4.26e-01 | 95.2% | 70.8% |
| 4dj3B02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.64 | 49.0 | 4.09e-01 | 83.3% | 77.9% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.63 | 50.0 | 4.76e-01 | 96.4% | 72.0% |
| 4kktA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 56.0 | 5.20e-01 | 100.0% | 79.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 37.0 | 4.02e-01 | 96.4% | 69.9% |
| 5dm6S01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.62 | 53.0 | 5.27e-01 | 94.0% | 100.0% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 46.0 | 4.20e-01 | 81.0% | 92.0% |
| 1d06A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.61 | 46.0 | 3.98e-01 | 81.0% | 83.1% |
| 2z6cA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 43.0 | 3.88e-01 | 76.2% | 89.3% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.60 | 46.0 | 4.13e-01 | 83.3% | 89.9% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.59 | 39.0 | 3.84e-01 | 78.6% | 62.6% |
| 8a8gA01 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.57 | 51.0 | 4.30e-01 | 98.8% | 90.0% |
| 4m4xA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 44.0 | 3.87e-01 | 83.3% | 94.4% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 48.0 | 4.51e-01 | 98.8% | 75.2% |
| 1a1xA00 | 2.40.15.10 | Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 | 0.57 | 51.0 | 4.72e-01 | 98.8% | 90.6% |
| 2vlgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 41.0 | 3.92e-01 | 77.4% | 99.0% |
| 3mqqB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 43.0 | 3.92e-01 | 83.3% | 89.8% |
| 3mr0A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 41.0 | 3.86e-01 | 79.8% | 94.5% |
| 2h6oA02 | 2.60.40.2810 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 46.0 | 3.85e-01 | 96.4% | 71.6% |
| 2xcmC00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 46.0 | 4.53e-01 | 91.7% | 88.0% |
| 1ll8A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 41.0 | 3.75e-01 | 82.1% | 100.0% |
| 4l68A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 40.0 | 3.70e-01 | 94.0% | 60.9% |
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.54 | 46.0 | 4.17e-01 | 98.8% | 87.6% |
| 2o30A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 44.0 | 4.52e-01 | 94.0% | 91.5% |
| 1shyA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 47.0 | 4.44e-01 | 98.8% | 81.4% |
| 2k8qA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 3.97e-01 | 96.4% | 85.1% |
| 6kjuB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 41.0 | 3.73e-01 | 85.7% | 93.2% |
| 4hiaA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 40.0 | 3.29e-01 | 84.5% | 63.6% |
| 1dleB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.52 | 43.0 | 3.63e-01 | 90.5% | 78.2% |
| 2pd8B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 40.0 | 3.48e-01 | 86.9% | 72.1% |
| 3w1zC00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 44.0 | 3.84e-01 | 95.2% | 84.6% |
| 3wnkA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 43.0 | 3.82e-01 | 94.0% | 89.6% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.51 | 43.0 | 3.45e-01 | 94.0% | 64.7% |
| 1w96C04 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.50 | 39.0 | 2.82e-01 | 85.7% | 74.6% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031753 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.81 | 68.0 | 6.53e-01 | 97.6% | 80.0% |
| 4033372 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.80 | 70.0 | 6.39e-01 | 95.2% | 75.5% |
| 4951165 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.77 | 47.0 | 5.64e-01 | 81.0% | 94.5% |
| 4981303 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.77 | 48.0 | 5.71e-01 | 79.8% | 96.4% |
| 3981227 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 59.0 | 6.21e-01 | 94.0% | 92.0% |
| 5064515 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.75 | 48.0 | 5.57e-01 | 77.4% | 91.7% |
| 3969735 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 54.0 | 5.90e-01 | 97.6% | 92.9% |
| 3604610 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 54.0 | 5.99e-01 | 85.7% | 100.0% |
| 4944212 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.72 | 50.0 | 4.95e-01 | 82.1% | 68.2% |
| 4299010 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.71 | 57.0 | 5.52e-01 | 100.0% | 76.8% |
| 3970513 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.70 | 55.0 | 5.50e-01 | 98.8% | 82.4% |
| 4950522 | 284.4.1.0 ↗ | a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain | 0.70 | 43.0 | 5.18e-01 | 82.1% | 96.4% |
| 5070142 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.69 | 41.0 | 5.02e-01 | 86.9% | 100.0% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.69 | 61.0 | 6.02e-01 | 98.8% | 94.4% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.68 | 59.0 | 5.50e-01 | 96.4% | 99.0% |
| 3969448 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 59.0 | 5.53e-01 | 97.6% | 100.0% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.67 | 57.0 | 5.06e-01 | 100.0% | 65.0% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 60.0 | 5.23e-01 | 98.8% | 79.2% |
| 3972305 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 57.0 | 5.63e-01 | 92.9% | 96.7% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.67 | 57.0 | 5.62e-01 | 92.9% | 96.7% |
| 3949052 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 55.0 | 5.37e-01 | 100.0% | 83.3% |
| 5055336 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.65 | 48.0 | 4.72e-01 | 82.1% | 72.2% |
| 3970827 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.65 | 56.0 | 5.66e-01 | 94.0% | 97.6% |
| 4393593 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.65 | 58.0 | 5.58e-01 | 97.6% | 94.7% |
| 3968713 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.65 | 57.0 | 5.56e-01 | 95.2% | 94.4% |
| 4247994 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.64 | 57.0 | 5.42e-01 | 97.6% | 98.0% |
| 3801974 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.64 | 48.0 | 4.38e-01 | 78.6% | 96.4% |
| 3535347 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 58.0 | 5.21e-01 | 100.0% | 86.1% |
| 5037173 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 51.0 | 4.96e-01 | 100.0% | 76.8% |
| 3967435 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.64 | 56.0 | 5.41e-01 | 96.4% | 91.6% |
| 4057590 | 1.1.5.86 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN3 | 0.64 | 58.0 | 4.83e-01 | 98.8% | 64.3% |
| 4217523 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.64 | 57.0 | 4.97e-01 | 97.6% | 72.0% |
| 3909822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 57.0 | 5.23e-01 | 100.0% | 87.3% |
| 4030042 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.63 | 48.0 | 4.10e-01 | 79.8% | 97.7% |
| 4988945 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.63 | 48.0 | 3.82e-01 | 82.1% | 62.3% |
| 4299801 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.63 | 47.0 | 4.25e-01 | 81.0% | 89.2% |
| 4285300 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.63 | 55.0 | 5.31e-01 | 96.4% | 96.8% |
| 3253514 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.63 | 56.0 | 5.26e-01 | 97.6% | 96.0% |
| 3966280 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 55.0 | 5.32e-01 | 96.4% | 91.6% |
| 5055894 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.62 | 48.0 | 4.27e-01 | 84.5% | 85.6% |
| 3982848 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.61 | 45.0 | 3.80e-01 | 79.8% | 70.7% |
| 5044348 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.61 | 46.0 | 4.28e-01 | 82.1% | 98.2% |
| 3386877 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.61 | 45.0 | 3.70e-01 | 79.8% | 66.3% |
| 4977586 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 46.0 | 3.06e-01 | 81.0% | 30.4% |
| 3971678 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 46.0 | 4.08e-01 | 100.0% | 56.7% |
| 5056723 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 52.0 | 4.98e-01 | 98.8% | 83.2% |
| 3945834 | 1.1.7.79 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_RND | 0.60 | 52.0 | 4.90e-01 | 100.0% | 81.0% |
| 3206575 | 1.1.8.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP_EFTU_D3 | 0.59 | 48.0 | 4.36e-01 | 92.9% | 65.5% |
| 5005721 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.59 | 46.0 | 4.20e-01 | 84.5% | 94.8% |
| 4968254 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 46.0 | 4.11e-01 | 84.5% | 90.0% |
| 3626966 | 1.1.7.90 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1 | 0.59 | 52.0 | 4.80e-01 | 100.0% | 75.5% |
| 4980675 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.59 | 46.0 | 4.11e-01 | 85.7% | 95.0% |
| 3533150 | 11.1.1.1108 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERB_head | 0.57 | 47.0 | 4.54e-01 | 100.0% | 83.2% |
| 4524276 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.57 | 44.0 | 3.05e-01 | 88.1% | 67.2% |
| 5019700 | 5090.1.1.6 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › S-layer | 0.56 | 43.0 | 4.10e-01 | 82.1% | 90.0% |
| 3262455 | 1.1.7.90 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1 | 0.56 | 50.0 | 4.74e-01 | 100.0% | 84.0% |
| 4465190 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.56 | 43.0 | 3.00e-01 | 88.1% | 65.0% |
| 4961968 | 286.1.1.4 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Pro_racemase | 0.55 | 40.0 | 3.22e-01 | 78.6% | 95.0% |
| 4010912 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 41.0 | 3.61e-01 | 82.1% | 88.5% |
| 3263394 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.54 | 45.0 | 3.98e-01 | 92.9% | 64.6% |
| 4011994 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 47.0 | 4.35e-01 | 100.0% | 74.5% |
| 4432262 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.54 | 46.0 | 4.10e-01 | 92.9% | 80.0% |
| 3892091 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 46.0 | 3.50e-01 | 92.9% | 52.6% |
| 5040729 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.54 | 41.0 | 3.83e-01 | 84.5% | 77.3% |
| 3216034 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 3.88e-01 | 98.8% | 58.7% |
| 4126423 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.54 | 39.0 | 3.05e-01 | 81.0% | 53.5% |
| 3659859 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.53 | 47.0 | 3.43e-01 | 96.4% | 45.9% |
| 3634800 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.53 | 38.0 | 3.60e-01 | 77.4% | 88.6% |
| 3516283 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.53 | 41.0 | 4.41e-01 | 86.9% | 100.0% |
| 1918907 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.53 | 45.0 | 3.71e-01 | 96.4% | 84.8% |
| 4503008 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.52 | 42.0 | 3.30e-01 | 91.7% | 55.0% |
| 3546177 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.52 | 45.0 | 3.33e-01 | 98.8% | 36.2% |
| 3895056 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.50 | 41.0 | 3.71e-01 | 92.9% | 67.5% |
| 3940735 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 42.0 | 2.85e-01 | 96.4% | 31.3% |
| 3510772 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.50 | 44.0 | 3.52e-01 | 100.0% | 67.4% |
D5
medium
residues 197-259
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v1aA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.58 | 43.0 | 2.74e-01 | 77.8% | 52.2% |
| 3kuzB00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 37.0 | 3.14e-01 | 90.5% | 40.4% |
| 1vm7B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.55 | 46.0 | 3.04e-01 | 98.4% | 91.9% |
| 1c4pC00 | 3.10.20.180 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 40.0 | 3.24e-01 | 85.7% | 40.2% |
| 5c40B00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 41.0 | 2.73e-01 | 92.1% | 91.0% |
| 3ie7A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 41.0 | 2.72e-01 | 93.7% | 90.6% |
| 2nwhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 44.0 | 2.81e-01 | 96.8% | 75.6% |
| 3ktnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 40.0 | 2.57e-01 | 90.5% | 68.5% |
| 6ilsA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 41.0 | 2.74e-01 | 96.8% | 79.8% |
| 3ikhA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 38.0 | 2.55e-01 | 85.7% | 65.7% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031752 | 3071.1.1.2 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › Prophage_tail | 0.78 | 70.0 | 6.72e-01 | 100.0% | 87.1% |
| 4957567 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.64 | 53.0 | 5.18e-01 | 100.0% | 81.4% |
| 4889790 | 3071.1.1.7 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › PF30637 | 0.62 | 55.0 | 4.06e-01 | 100.0% | 38.0% |
| 5076913 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.59 | 52.0 | 3.34e-01 | 100.0% | 78.7% |
| 2468520 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.58 | 51.0 | 4.82e-01 | 100.0% | 81.8% |
| 3629436 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.57 | 44.0 | 2.87e-01 | 87.3% | 91.9% |
| 4307705 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.56 | 47.0 | 3.04e-01 | 98.4% | 86.3% |
| 4942886 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.55 | 45.0 | 2.96e-01 | 98.4% | 89.7% |
| None | — | 0.54 | 44.0 | 2.89e-01 | 98.4% | 87.6% | |
| 3943829 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.54 | 41.0 | 2.76e-01 | 87.3% | 94.7% |
| None | — | 0.53 | 43.0 | 2.71e-01 | 88.9% | 87.0% | |
| 3469216 | 221.1.1.166 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PF26130 | 0.52 | 38.0 | 3.29e-01 | 81.0% | 95.2% |
| 3429639 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.52 | 37.0 | 3.52e-01 | 76.2% | 97.3% |
| 369252 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.51 | 41.0 | 2.72e-01 | 93.7% | 90.6% |
| 303788 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.51 | 42.0 | 2.81e-01 | 98.4% | 81.8% |
| 3836597 | 221.1.1.4 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PB1 | 0.51 | 38.0 | 3.08e-01 | 81.0% | 85.6% |
| 5051622 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.51 | 40.0 | 2.61e-01 | 88.9% | 87.3% |
D6
medium
residues 330-400
Domain cluster:
representative