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MF042360.1__ARV76757.1__PHABIO_126__00126

Bact-Vir

MF042360.1__ARV76757.1__PHABIO_126__00126

Identity

Accession:
MF042360 ↗
Kingdom:
phage

Quality

64.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Phabiovirus› Pseudomonas_phage_Phabio

TaxID: 2006668

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 44-107_149-175_187-206
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i51B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 42.0 3.59e-01 85.6% 64.9%
1jeyA02 2.40.290.10 Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › 0.52 43.0 4.16e-01 89.2% 93.7%
2fpnA02 3.30.360.40 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › YwmB-like 0.52 25.0 3.10e-01 91.9% 73.8%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4337720 3454.1.1.2 ↗ beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › T2SSC 0.53 31.0 3.81e-01 98.2% 96.9%
4393615 2.1.1.115 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PabTrmU54_TRAM_dom 0.52 29.0 3.53e-01 91.0% 90.8%
D2 medium residues 108-148_207-265
PDB
D3 medium residues 266-410_423-439_494-513
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xd6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 28.0 3.79e-01 82.4% 85.1%
4i93A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 28.0 3.76e-01 81.9% 88.4%
4l68A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 27.0 3.38e-01 82.4% 72.7%
2fm8B00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 32.0 3.83e-01 95.6% 81.6%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 38.0 4.24e-01 95.1% 88.1%
6kjuB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 29.0 3.58e-01 95.6% 78.6%
1jv2B04 4.10.1240.30 Few Secondary Structures › Irregular › Hormone receptor fold › 0.54 24.0 3.38e-01 92.3% 86.0%
1x8bA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 25.0 3.42e-01 82.4% 91.7%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 32.0 3.72e-01 95.1% 83.3%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 33.0 3.95e-01 80.2% 98.3%
4gioA00 2.60.40.3230 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 27.0 3.41e-01 79.1% 89.6%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3555960 827.1.1.1 ↗ a+b two layers › Integrin beta tail domain › Integrin beta tail domain › Integrin beta tail domain › Integrin_B_tail 0.63 28.0 3.92e-01 92.3% 85.9%
5047292 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.58 29.0 3.58e-01 95.1% 76.4%
5047765 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.57 38.0 4.47e-01 95.1% 97.6%
3993100 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 35.0 3.75e-01 95.1% 76.2%