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MF042360.1__ARV76958.1__PHABIO_327__00327

Bact-Vir

MF042360.1__ARV76958.1__PHABIO_327__00327

Identity

Accession:
MF042360 ↗
Kingdom:
phage

Quality

87.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Phabiovirus› Pseudomonas_phage_Phabio

TaxID: 2006668

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-111
PDB
Domain cluster: rep: MW735835.1__QTH80346.1__PA10_00146__00146__D3-93
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1hdhA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.66 41.0 4.71e-01 72.9% 85.7%
1y4oA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.63 36.0 3.68e-01 72.9% 56.7%
2gq1A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.61 42.0 3.58e-01 70.1% 99.4%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 40.0 2.91e-01 73.8% 68.5%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.54 41.0 4.41e-01 81.3% 100.0%
5mmiG01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.54 40.0 4.38e-01 91.6% 100.0%
6jpaE00 1.20.140.150 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.54 49.0 4.19e-01 100.0% 72.2%
2ci9B00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 37.0 3.79e-01 70.1% 99.0%
3tfiA00 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.53 44.0 3.03e-01 88.8% 58.8%
1dl5A02 3.55.20.10 Alpha Beta › 3-Layer(bab) Sandwich › Protein-l-isoaspartate O-methyltransferase; Chain: A, domain 2 › Protein-L-isoaspartyl O-methyltransferase, C-terminal domain 0.53 36.0 3.53e-01 90.7% 63.8%
1yprA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.53 37.0 3.51e-01 71.0% 76.8%
3fanA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 28.0 3.25e-01 73.8% 71.2%
3nvnA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 38.0 2.59e-01 73.8% 32.6%
2ehbD00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.53 43.0 4.13e-01 90.7% 80.2%
1pj5A03 3.30.1360.120 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 0.53 43.0 3.53e-01 88.8% 81.8%
3dxqA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 28.0 3.20e-01 85.0% 68.7%
1vx7H01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.52 38.0 4.15e-01 92.5% 98.8%
4upkA01 3.40.720.10 Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A 0.52 42.0 2.77e-01 87.9% 63.7%
1vq8E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.51 36.0 4.14e-01 87.9% 100.0%
4a2lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 36.0 2.61e-01 72.9% 53.4%
1mbmA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 28.0 3.12e-01 77.6% 68.4%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 36.0 3.32e-01 72.0% 100.0%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 3.56e-01 91.6% 86.0%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 39.0 2.62e-01 81.3% 96.3%
4a17E01 3.90.930.12 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 0.50 37.0 4.02e-01 92.5% 98.8%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3909523 6129.1.1.0 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.61 45.0 3.58e-01 76.6% 57.6%
4952106 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 46.0 3.87e-01 84.1% 83.3%
4019954 5.1.4.169 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.57 42.0 2.86e-01 75.7% 59.7%
3591979 77.2.1.1 ↗ beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN 0.57 40.0 3.53e-01 72.0% 64.5%
3739320 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.56 51.0 4.09e-01 100.0% 73.8%
3477257 5.1.4.148 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDR93 0.56 39.0 2.50e-01 73.8% 47.5%
3286200 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 41.0 2.83e-01 76.6% 62.0%
3227356 633.23.1.4 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › Claudin_2 0.55 50.0 3.95e-01 100.0% 71.2%
3700695 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.55 39.0 2.72e-01 73.8% 46.1%
2527938 7515.1.1.5 ↗ a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Sulfatase,SGSH_C 0.55 39.0 2.61e-01 75.7% 79.9%
3934420 5001.1.1.44 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv 0.53 49.0 3.85e-01 99.1% 67.1%
None — 0.53 37.0 2.69e-01 73.8% 54.0%
4088600 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.52 39.0 4.30e-01 88.8% 100.0%
3451427 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.52 37.0 4.08e-01 89.7% 100.0%
3793797 5.1.5.93 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.52 38.0 2.70e-01 74.8% 51.2%
4981353 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.52 37.0 4.18e-01 88.8% 100.0%
5035419 5.1.4.40 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.51 37.0 2.72e-01 74.8% 75.3%
3789628 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.51 37.0 2.63e-01 74.8% 51.5%
4298891 4121.1.1.2 ↗ a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like 0.51 43.0 3.13e-01 99.1% 35.2%
5071748 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.51 35.0 4.04e-01 81.3% 100.0%
5079402 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 37.0 3.48e-01 76.6% 100.0%
3172579 5.1.4.128 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rax2 0.50 36.0 2.58e-01 74.8% 52.2%
1442686 318.1.1.1 ↗ a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.50 37.0 4.02e-01 92.5% 98.8%