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MF042360.1__ARV76972.1__PHABIO_341__00341
Bact-VirMF042360.1__ARV76972.1__PHABIO_341__00341
Identity
- Accession:
- MF042360 ↗
- Kingdom:
- phage
Quality
92.7
mean pLDDT
Taxonomy
TaxID: 2006668
Cluster
View cluster (22 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-123
Domain cluster:
rep: ON287372.1__UQT02932.1__TOTORO_00690__00069__D17-122
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ey4D00 | 2.40.10.230 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain | 0.74 | 37.0 | 4.63e-01 | 95.9% | 78.7% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 39.0 | 3.91e-01 | 78.7% | 60.7% |
| 1o6eA00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.61 | 56.0 | 4.55e-01 | 100.0% | 60.0% |
| 2rdeA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 35.0 | 3.72e-01 | 78.7% | 63.1% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.59 | 35.0 | 4.01e-01 | 95.9% | 79.8% |
| 1cmvB00 | 3.20.16.10 | Alpha Beta › Alpha-Beta Barrel › Serine Protease, Human Cytomegalovirus Protease; Chain A › Herpesvirus/Caudovirus protease domain | 0.56 | 49.0 | 4.13e-01 | 100.0% | 56.3% |
| 3g8qA02 | 3.30.70.1940 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 31.0 | 3.66e-01 | 83.6% | 81.2% |
| 3a8kA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.53 | 33.0 | 3.77e-01 | 83.6% | 86.4% |
| 2ynaA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 30.0 | 3.37e-01 | 77.9% | 77.3% |
| 3rh7A02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 35.0 | 3.44e-01 | 90.2% | 65.9% |
| 1vq0A01 | 3.55.30.10 | Alpha Beta › 3-Layer(bab) Sandwich › Hsp33 domain › Hsp33 domain | 0.50 | 38.0 | 3.19e-01 | 82.8% | 91.4% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3585229 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.79 | 74.0 | 7.06e-01 | 100.0% | 90.7% |
| 1933303 | 50.1.1.2 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S77 | 0.77 | 72.0 | 6.42e-01 | 100.0% | 79.5% |
| 3961250 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.76 | 39.0 | 4.67e-01 | 84.4% | 71.8% |
| 3959024 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.76 | 44.0 | 4.75e-01 | 100.0% | 66.7% |
| 4995675 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.76 | 71.0 | 6.31e-01 | 100.0% | 80.6% |
| 5059785 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 39.0 | 4.65e-01 | 96.7% | 76.2% |
| 3957158 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.73 | 43.0 | 4.68e-01 | 100.0% | 68.6% |
| 3964948 | 1.1.16.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › Peptidase_S78 | 0.73 | 61.0 | 6.14e-01 | 100.0% | 87.2% |
| 3347366 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.73 | 44.0 | 4.51e-01 | 100.0% | 62.6% |
| 2771876 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.72 | 40.0 | 4.15e-01 | 93.4% | 57.5% |
| 3602200 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 35.0 | 4.41e-01 | 96.7% | 78.6% |
| 5041953 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 36.0 | 4.92e-01 | 97.5% | 98.3% |
| 5004197 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.71 | 54.0 | 5.88e-01 | 94.3% | 96.0% |
| 5003309 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.71 | 63.0 | 6.19e-01 | 100.0% | 90.0% |
| 3959311 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.70 | 42.0 | 4.70e-01 | 91.8% | 75.8% |
| 5017568 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.70 | 38.0 | 4.56e-01 | 95.9% | 80.0% |
| 4960055 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.67 | 61.0 | 5.91e-01 | 100.0% | 89.1% |
| 3945977 | 50.1.1.4 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › DUF2213 | 0.66 | 60.0 | 5.45e-01 | 100.0% | 87.3% |
| 3165956 | 2007.2.4.10 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphoinositide phosphatase › Mu-like_Pro | 0.65 | 58.0 | 5.61e-01 | 100.0% | 93.6% |
| 3982061 | 1.1.16.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › MlaD | 0.64 | 45.0 | 4.54e-01 | 100.0% | 71.2% |
| 3943528 | 1.1.16.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain | 0.64 | 45.0 | 4.58e-01 | 100.0% | 74.2% |
| 3184500 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.63 | 33.0 | 3.95e-01 | 81.1% | 75.0% |
| 5083920 | 50.1.1.0 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin | 0.63 | 58.0 | 5.55e-01 | 100.0% | 95.0% |
| 4951601 | 304.24.1.37 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › MCR_C | 0.63 | 28.0 | 3.78e-01 | 81.1% | 78.5% |
| 4957296 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 30.0 | 3.87e-01 | 82.8% | 82.9% |
| 3838338 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.60 | 38.0 | 4.40e-01 | 82.8% | 90.6% |
| 1304358 | 50.1.1.1 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S21 | 0.58 | 52.0 | 4.29e-01 | 100.0% | 56.3% |
| 5023213 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.57 | 29.0 | 3.66e-01 | 82.8% | 82.9% |
| 1150480 | 50.1.1.1 ↗ | beta barrels › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Herpes virus serine proteinase, assemblin › Peptidase_S21 | 0.54 | 41.0 | 4.48e-01 | 84.4% | 95.1% |
| 3684865 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.53 | 31.0 | 3.36e-01 | 98.4% | 66.7% |
| 3853734 | 244.1.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C | 0.52 | 38.0 | 4.16e-01 | 91.8% | 94.0% |