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MF042360.1__ARV76980.1__PHABIO_349__00349

Bact-Vir

MF042360.1__ARV76980.1__PHABIO_349__00349

Identity

Accession:
MF042360 ↗
Kingdom:
phage

Quality

56.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Phabiovirus› Pseudomonas_phage_Phabio

TaxID: 2006668

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-107
PDB
Domain cluster: rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00670__D5-100
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ou8A00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.85 77.0 7.61e-01 100.0% 92.5%
2nysA00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.73 67.0 6.40e-01 100.0% 88.0%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 38.0 4.63e-01 86.1% 100.0%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.63 42.0 4.30e-01 91.1% 71.6%
4omfB02 3.10.450.750 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 30.0 3.94e-01 79.2% 97.9%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 34.0 3.93e-01 84.2% 86.2%
5ygbA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 37.0 4.03e-01 90.1% 80.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 37.0 4.10e-01 83.2% 89.3%
1efzA00 3.20.20.105 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like 0.56 39.0 2.70e-01 73.3% 57.0%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 31.0 3.59e-01 84.2% 79.7%
5ejrA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 33.0 3.65e-01 82.2% 80.0%
3n8hA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.52 28.0 3.18e-01 85.1% 68.4%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.52 38.0 4.00e-01 82.2% 86.7%
1h4rA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 33.0 3.50e-01 82.2% 73.6%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.51 34.0 3.24e-01 72.3% 56.2%
3dsmA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 37.0 2.60e-01 76.2% 35.2%
2o07A01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.50 28.0 3.35e-01 74.3% 89.8%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
605 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.85 77.0 7.61e-01 100.0% 92.5%
165392 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.73 67.0 6.34e-01 100.0% 85.8%
4282868 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 44.0 5.11e-01 90.1% 94.3%
4087011 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 49.0 5.01e-01 91.1% 80.0%
4973804 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 38.0 4.27e-01 81.2% 74.7%
3281271 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.64 44.0 4.65e-01 93.1% 81.1%
5011500 4.1.1.14 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.62 42.0 4.24e-01 93.1% 70.0%
5014688 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.61 31.0 3.96e-01 80.2% 87.3%
3964608 220.1.1.104 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin 0.59 34.0 3.94e-01 70.3% 80.0%
3480535 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 37.0 3.68e-01 82.2% 62.9%
5071919 220.1.1.320 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Zn_Ribbon_1 0.57 39.0 3.55e-01 83.2% 51.4%
5075225 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 40.0 3.82e-01 83.2% 64.7%
5047735 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 39.0 3.50e-01 83.2% 50.3%
3737804 220.1.1.121 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 0.55 38.0 3.77e-01 82.2% 67.6%
3514750 220.1.1.52 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C 0.55 40.0 3.88e-01 82.2% 69.1%
3495619 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.55 35.0 3.48e-01 82.2% 60.0%
3407758 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.55 36.0 3.49e-01 82.2% 59.1%
3656401 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 37.0 4.14e-01 96.0% 94.7%
5061515 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 42.0 4.20e-01 82.2% 82.9%
3404845 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.54 34.0 3.56e-01 82.2% 68.4%
3200646 220.1.1.201 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7493 0.54 40.0 4.02e-01 82.2% 77.1%
3475799 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.53 38.0 3.54e-01 82.2% 60.8%
4947834 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 35.0 3.50e-01 82.2% 65.7%
3186404 3441.1.1.2 ↗ alpha bundles › Bc28.1 › Bc28.1 › Bc28.1 › Pescadillo_N 0.52 36.0 3.24e-01 70.3% 89.3%
3931122 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 35.0 3.68e-01 70.3% 83.2%
3392308 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.51 35.0 3.61e-01 82.2% 74.7%
3964629 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 40.0 3.75e-01 84.2% 83.2%
3300116 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.51 38.0 3.75e-01 77.2% 74.3%
3214387 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 38.0 3.99e-01 79.2% 86.7%
3926363 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 34.0 3.32e-01 82.2% 61.7%