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MF042361.1__ARV77134.1__SKUL_35__00035
Bact-VirMF042361.1__ARV77134.1__SKUL_35__00035
Identity
- Accession:
- MF042361 ↗
- Kingdom:
- phage
Quality
87.9
mean pLDDT
Taxonomy
TaxID: 2006671
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-115
Domain cluster:
rep: MN988552.1__QIG76183.1__EVC24_162__00162__D4-119
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 43.0 | 4.16e-01 | 87.4% | 64.3% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 34.0 | 3.98e-01 | 89.2% | 94.7% |
| 2jfdA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.54 | 31.0 | 3.70e-01 | 91.0% | 92.4% |
| 3znuA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.52 | 37.0 | 3.99e-01 | 91.0% | 88.3% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 41.0 | 4.27e-01 | 92.8% | 95.0% |
| 6gdxA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 38.0 | 3.86e-01 | 92.8% | 79.4% |
| 4mt1A07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.52 | 39.0 | 4.10e-01 | 94.6% | 88.2% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 40.0 | 4.17e-01 | 93.7% | 93.9% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 37.0 | 3.91e-01 | 93.7% | 91.4% |
| 2i8eA01 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 32.0 | 3.79e-01 | 91.0% | 97.3% |
| 2dvkA00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.50 | 40.0 | 3.54e-01 | 86.5% | 76.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4441813 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.56 | 40.0 | 4.50e-01 | 91.0% | 100.0% |
| 3793391 | 304.28.1.30 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SCVP | 0.54 | 40.0 | 4.10e-01 | 91.9% | 80.9% |
| 1320691 | 312.1.1.12 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › DUF4931_C | 0.53 | 35.0 | 3.42e-01 | 98.2% | 59.5% |
| 4929491 | 304.5.1.13 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF3574 | 0.52 | 42.0 | 4.24e-01 | 92.8% | 87.2% |
| 1680274 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.52 | 39.0 | 4.05e-01 | 92.8% | 88.9% |
| 4448554 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.52 | 38.0 | 4.08e-01 | 91.9% | 91.6% |
| 4056579 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.52 | 37.0 | 4.05e-01 | 92.8% | 94.4% |
| 4597118 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 38.0 | 4.06e-01 | 91.9% | 91.6% |
| 4476428 | 304.20.1.0 ↗ | a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain | 0.51 | 45.0 | 3.92e-01 | 100.0% | 94.9% |
| 4047137 | 4956.1.1.1 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 | 0.51 | 35.0 | 3.95e-01 | 91.0% | 98.8% |
| 3715301 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.51 | 42.0 | 3.97e-01 | 95.5% | 73.6% |
| 3833843 | 2003.1.2.60 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO, NAD_binding_8 | 0.50 | 44.0 | 3.02e-01 | 97.3% | 75.7% |
| None | — | 0.50 | 44.0 | 3.35e-01 | 100.0% | 56.1% | |
| 3891425 | 11.1.1.839 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DAG1 | 0.50 | 43.0 | 4.16e-01 | 98.2% | 86.4% |
| 4008380 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.50 | 42.0 | 4.14e-01 | 92.8% | 96.7% |