←Back to structures
MF042361.1__ARV77156.1__SKUL_57__00057
Bact-VirMF042361.1__ARV77156.1__SKUL_57__00057
Identity
- Accession:
- MF042361 ↗
- Kingdom:
- phage
Quality
65.2
mean pLDDT
Taxonomy
TaxID: 2006671
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-98
D2
high
residues 104-212
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_86355_prodigal-single.1__X__X__00085__D3-105
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mj7A00 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.68 | 48.0 | 4.42e-01 | 85.3% | 56.7% |
| 2g30A02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.64 | 45.0 | 4.48e-01 | 83.5% | 69.0% |
| 2vt8A00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.63 | 58.0 | 5.29e-01 | 100.0% | 88.8% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 36.0 | 4.58e-01 | 74.3% | 98.4% |
| 2z0lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.61 | 42.0 | 3.05e-01 | 70.6% | 78.2% |
| 4jcwA02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.60 | 41.0 | 4.47e-01 | 71.6% | 90.0% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.59 | 42.0 | 4.07e-01 | 75.2% | 77.6% |
| 2ig6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 46.0 | 4.27e-01 | 87.2% | 97.9% |
| 3zqsA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.56 | 41.0 | 4.51e-01 | 86.2% | 94.3% |
| 1yreC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 42.0 | 3.58e-01 | 79.8% | 58.2% |
| 3fixA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 37.0 | 3.31e-01 | 70.6% | 64.8% |
| 1x99A00 | 2.60.270.20 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Cytolysin/lectin | 0.54 | 47.0 | 4.32e-01 | 95.4% | 98.6% |
| 3frmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 40.0 | 3.08e-01 | 80.7% | 52.4% |
| 3eb7A03 | 2.100.10.10 | Mainly Beta › Aligned Prism › Vitelline Membrane Outer Layer Protein I, subunit A › Pesticidal crystal protein, central domain | 0.53 | 39.0 | 3.22e-01 | 78.0% | 90.9% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 46.0 | 4.38e-01 | 99.1% | 95.3% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 41.0 | 4.11e-01 | 88.1% | 82.5% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3237828 | 331.9.1.9 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › PF26171 | 0.71 | 45.0 | 4.56e-01 | 88.1% | 62.7% |
| 5039633 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.71 | 40.0 | 4.88e-01 | 87.2% | 83.8% |
| 4978331 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.71 | 42.0 | 5.05e-01 | 79.8% | 91.4% |
| 3587129 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.67 | 40.0 | 5.05e-01 | 84.4% | 100.0% |
| 3280401 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.65 | 38.0 | 4.78e-01 | 83.5% | 98.5% |
| 4149459 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.62 | 51.0 | 4.48e-01 | 86.2% | 70.3% |
| 5018171 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 40.0 | 4.67e-01 | 78.9% | 93.3% |
| 5029476 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.61 | 34.0 | 2.81e-01 | 88.1% | 31.9% |
| 3291057 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 38.0 | 4.63e-01 | 86.2% | 98.6% |
| 3171717 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 47.0 | 3.60e-01 | 94.5% | 68.8% |
| 3288311 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.54 | 43.0 | 3.75e-01 | 84.4% | 86.7% |
| 3208232 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 41.0 | 2.70e-01 | 81.7% | 25.7% |
| 1853949 | 243.1.1.35 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ORF_12_N | 0.53 | 41.0 | 4.18e-01 | 87.2% | 84.0% |
| 5027579 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.53 | 37.0 | 3.32e-01 | 73.4% | 67.5% |
| 6397 | 243.1.1.30 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4904 | 0.52 | 46.0 | 4.38e-01 | 99.1% | 95.3% |
| 3257390 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 42.0 | 3.06e-01 | 89.0% | 49.4% |
| 3242101 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.50 | 42.0 | 2.67e-01 | 92.7% | 22.5% |