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MF044458.2__ASD54014.1__ST32_0033__00033

Bact-Vir

MF044458.2__ASD54014.1__ST32_0033__00033

Identity

Accession:
MF044458 ↗
Kingdom:
phage

Quality

69.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-44
PDB
Domain cluster: representative
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3q6kA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.84 73.0 4.14e-01 100.0% 11.3%
3kxyJ00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.79 67.0 4.69e-01 100.0% 58.1%
1mdaH00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.79 65.0 3.75e-01 100.0% 10.1%
3fyfA00 2.40.128.410 Mainly Beta › Beta Barrel › Lipocalin › 0.78 66.0 4.46e-01 100.0% 30.9%
1attA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.77 64.0 4.44e-01 100.0% 67.9%
7qryB01 2.60.120.920 Mainly Beta › Sandwich › Jelly Rolls › SPRY domain 0.76 64.0 4.35e-01 100.0% 59.5%
3pijA02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.75 64.0 4.34e-01 100.0% 64.4%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.75 62.0 3.70e-01 100.0% 14.9%
1zq7A01 3.30.700.20 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Hypothetical protein ph0010; domain 1 0.74 63.0 4.45e-01 100.0% 62.2%
1f1sA03 2.60.220.10 Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal 0.74 63.0 4.99e-01 100.0% 62.2%
6eugA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.74 61.0 3.59e-01 100.0% 13.0%
2ix2A01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.72 63.0 3.87e-01 100.0% 48.9%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.71 50.0 4.22e-01 79.5% 42.3%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 49.0 4.11e-01 79.5% 42.3%
2wozA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.69 58.0 3.47e-01 100.0% 13.0%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.67 54.0 4.01e-01 100.0% 33.9%
3jr1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 53.0 4.14e-01 97.4% 74.7%
2af5A01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.66 52.0 4.89e-01 100.0% 75.9%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.65 51.0 3.09e-01 100.0% 12.3%
6nhiA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.65 51.0 4.16e-01 94.9% 92.9%
2wfbA00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.64 48.0 3.44e-01 84.6% 35.8%
3r7wB02 3.30.450.190 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.64 44.0 3.30e-01 79.5% 25.4%
3lxrF00 1.10.4120.20 Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › 0.63 51.0 3.42e-01 100.0% 69.1%
3aqoA02 3.30.1360.200 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.63 45.0 3.18e-01 79.5% 47.5%
7bysA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 47.0 2.94e-01 97.4% 48.5%
2zwaA02 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.62 48.0 2.94e-01 100.0% 14.9%
2k7iA01 3.30.160.160 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like 0.61 42.0 4.10e-01 79.5% 62.5%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.61 47.0 3.30e-01 100.0% 23.9%
1v58A01 3.10.450.70 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal 0.58 45.0 3.92e-01 97.4% 70.4%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 4.06e-01 94.9% 76.8%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 45.0 4.35e-01 97.4% 87.2%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 3.71e-01 100.0% 56.2%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 44.0 3.72e-01 100.0% 66.7%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 3.32e-01 97.4% 44.0%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 42.0 3.74e-01 92.3% 83.6%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 41.0 3.74e-01 92.3% 86.2%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 42.0 3.69e-01 89.7% 79.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 38.0 3.54e-01 94.9% 86.4%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4497181 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.87 77.0 4.96e-01 100.0% 26.1%
3265052 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.87 70.0 4.25e-01 97.4% 14.9%
3403740 5.1.3.11 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › MRJP 0.85 71.0 4.12e-01 100.0% 10.8%
3601907 5.1.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.82 66.0 4.28e-01 97.4% 20.1%
3416404 5.1.4.240 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MRJP 0.81 68.0 3.92e-01 100.0% 10.8%
3993013 5.1.4.90 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Itfg2 0.81 68.0 3.99e-01 100.0% 11.8%
4295947 3844.1.1.1 a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.81 68.0 4.99e-01 100.0% 36.4%
3947081 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.80 63.0 5.53e-01 94.9% 59.4%
3975425 3844.1.1.1 a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C 0.80 68.0 5.01e-01 100.0% 40.0%
4998507 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.79 67.0 6.07e-01 97.4% 74.1%
3510850 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.79 67.0 5.16e-01 100.0% 44.4%
3796352 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.78 67.0 5.74e-01 100.0% 61.5%
3434453 252.1.1.0 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.78 56.0 5.67e-01 87.2% 78.9%
4179811 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.78 64.0 6.43e-01 100.0% 92.5%
3532938 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.78 67.0 3.87e-01 100.0% 10.8%
3168452 331.10.2.3 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1 0.77 66.0 4.84e-01 100.0% 40.0%
3384583 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.76 63.0 3.60e-01 100.0% 9.1%
3820829 5.1.5.66 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.76 57.0 3.40e-01 100.0% 10.8%
5039064 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.76 61.0 3.56e-01 100.0% 10.6%
3294906 5.1.5.86 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Kelch_1 0.73 64.0 3.74e-01 100.0% 13.7%
3968013 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.73 59.0 3.58e-01 100.0% 14.2%
4927858 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.73 58.0 5.22e-01 100.0% 63.6%
3934912 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.73 62.0 4.18e-01 100.0% 25.8%
2581425 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.72 60.0 5.51e-01 100.0% 72.7%
3890750 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 63.0 4.79e-01 100.0% 46.7%
4938265 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.72 50.0 4.39e-01 74.4% 48.3%
4930465 4294.1.1.0 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.71 58.0 5.14e-01 100.0% 63.3%
3276429 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.71 53.0 3.15e-01 100.0% 11.0%
4988502 375.1.1.298 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_HMPTM 0.70 59.0 5.66e-01 97.4% 91.1%
3259661 331.23.1.9 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › RnlA_toxin 0.69 57.0 4.84e-01 100.0% 60.0%
3734423 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.68 56.0 3.26e-01 100.0% 10.4%
3906040 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.66 54.0 3.62e-01 100.0% 27.1%
3198165 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 53.0 3.15e-01 97.4% 23.9%
3781077 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.65 50.0 3.72e-01 89.7% 33.0%
3823899 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.65 52.0 3.24e-01 97.4% 14.5%
3910607 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.64 53.0 4.64e-01 100.0% 82.8%
3547089 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 49.0 3.91e-01 100.0% 48.9%
5045333 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.60 46.0 4.07e-01 100.0% 55.1%
4929725 375.1.1.289 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5679 0.59 41.0 4.00e-01 79.5% 68.9%
3913687 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.58 47.0 3.70e-01 97.4% 45.6%
3313119 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 47.0 3.84e-01 100.0% 53.8%
3359784 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 47.0 4.09e-01 100.0% 66.2%
3485085 223.3.1.0 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins 0.57 45.0 3.13e-01 100.0% 64.0%
3701496 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 47.0 4.54e-01 97.4% 95.6%
3619598 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.57 44.0 3.59e-01 94.9% 60.0%
3429682 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 45.0 3.82e-01 100.0% 57.3%
3849311 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.55 44.0 3.97e-01 97.4% 86.7%
3256498 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 43.0 4.04e-01 97.4% 78.2%
4269256 4.1.1.245 beta barrels › SH3 › SH3 › SH3 › SspH 0.55 44.0 4.01e-01 100.0% 75.0%
3617175 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 41.0 3.89e-01 94.9% 70.9%
3234947 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.54 41.0 3.67e-01 92.3% 75.4%
3929758 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 41.0 3.86e-01 94.9% 80.0%
3816553 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.54 42.0 3.95e-01 100.0% 89.1%
4000403 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.53 42.0 4.06e-01 100.0% 84.0%
3241067 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 42.0 3.24e-01 100.0% 49.1%
4890477 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 39.0 3.75e-01 94.9% 94.1%