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MF063068.1__ARV77207.1__NOXIFER_36__00036

Bact-Vir

MF063068.1__ARV77207.1__NOXIFER_36__00036

Identity

Accession:
MF063068 ↗
Kingdom:
phage

Quality

75.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Noxifervirus› Pseudomonas_phage_Noxifer

TaxID: 2006684

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-151
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2oezA01 2.60.440.10 Mainly Beta › Sandwich › YacF-like › YacF-like domains 0.64 22.0 3.08e-01 100.0% 60.3%
6lbsB01 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.63 29.0 3.84e-01 100.0% 79.7%
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.62 29.0 3.70e-01 100.0% 73.9%
4hwdD00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.58 25.0 3.19e-01 94.6% 65.6%
2cpxA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.57 28.0 3.62e-01 77.0% 83.5%
5fmnA00 1.20.58.1000 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer 0.54 29.0 3.73e-01 83.1% 89.5%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.54 26.0 3.04e-01 93.2% 63.1%
4q5nA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 27.0 3.01e-01 93.2% 58.9%
4wjg400 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.52 37.0 3.08e-01 100.0% 41.8%
1quuA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 27.0 2.94e-01 95.9% 59.5%
2ln3A00 3.30.110.140 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.50 25.0 3.32e-01 100.0% 86.7%
5cqgA03 1.10.10.2210 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.50 26.0 3.36e-01 73.6% 89.9%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3707079 101.1.21.0 ↗ alpha arrays › HTH › HTH › HTH in T7 RNA polymerase 0.65 52.0 4.56e-01 83.1% 89.8%
3204863 3922.1.1.237 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › BUD22 0.62 51.0 5.10e-01 85.8% 91.3%
3997392 106.1.1.1 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.54 40.0 3.81e-01 79.1% 74.4%
4098259 110.1.1.13 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain › DUF3603 0.51 32.0 3.81e-01 74.3% 92.9%
3895658 604.1.1.1 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.51 26.0 3.04e-01 84.5% 66.4%
3600118 4044.1.1.0 ↗ alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins 0.51 28.0 3.46e-01 70.9% 84.2%
3577229 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.51 27.0 3.06e-01 100.0% 64.3%
4516261 3978.1.1.1 ↗ alpha complex topology › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › FA_desaturase 0.50 38.0 3.11e-01 80.4% 84.0%
3566104 632.11.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › RH_dom 0.50 27.0 3.19e-01 70.9% 74.0%
D2 high residues 158-323
PDB
D3 medium residues 332-364
PDB
Domain cluster: rep: MK599315.1__QBX32193.1__X__00046__DFULL