←Back to structures
MF063068.1__ARV77279.1__NOXIFER_110__00110
Bact-VirMF063068.1__ARV77279.1__NOXIFER_110__00110
Identity
- Accession:
- MF063068 ↗
- Kingdom:
- phage
Quality
71.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Chimalliviridae›
Noxifervirus›
Pseudomonas_phage_Noxifer
TaxID: 2006684
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-59
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xttB00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.65 | 44.0 | 2.98e-01 | 84.7% | 19.7% |
| 3zbqA00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.62 | 55.0 | 3.45e-01 | 100.0% | 27.9% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 40.0 | 2.72e-01 | 84.7% | 17.9% |
| 4k7cA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 40.0 | 2.42e-01 | 86.4% | 12.2% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3202208 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.83 | 61.0 | 4.41e-01 | 76.3% | 34.7% |
| 4025692 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.78 | 59.0 | 3.64e-01 | 81.4% | 20.3% |
| 4496501 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.75 | 62.0 | 3.85e-01 | 89.8% | 80.0% |
| 3680789 | 2004.1.1.505 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11, AAA_30 | 0.70 | 61.0 | 3.61e-01 | 93.2% | 16.3% |
| 3716174 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.69 | 59.0 | 4.71e-01 | 91.5% | 51.8% |
| 3939311 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.68 | 61.0 | 4.84e-01 | 96.6% | 52.7% |
| 3899599 | 109.3.1.164 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank, Ank_2, Ank_3, Ank_4 | 0.62 | 43.0 | 2.94e-01 | 93.2% | 20.5% |
| 4968033 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.58 | 46.0 | 2.57e-01 | 83.1% | 20.4% |
| 4045825 | 1166.1.1.1 ↗ | alpha arrays › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › Potassium-transporting ATPase KdpC subunit › KdpC | 0.55 | 50.0 | 3.51e-01 | 100.0% | 99.4% |
| 57748 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.54 | 36.0 | 3.60e-01 | 72.9% | 69.2% |
| 4959043 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.53 | 36.0 | 2.74e-01 | 81.4% | 32.3% |
| 3908432 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.51 | 40.0 | 2.42e-01 | 86.4% | 62.8% |