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MF063068.1__ARV77387.1__NOXIFER_222__00218

Bact-Vir

MF063068.1__ARV77387.1__NOXIFER_222__00218

Identity

Accession:
MF063068 ↗
Kingdom:
phage

Quality

53.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Noxifervirus› Pseudomonas_phage_Noxifer

TaxID: 2006684

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-156
PDB
D2 high residues 205-275
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hwxA00 3.30.350.10 Alpha Beta › 2-Layer Sandwich › Subtilisin Inhibitor › Subtilisin inhibitor-like 0.61 36.0 3.16e-01 74.6% 36.0%
2qsdA01 3.10.20.10 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.59 45.0 4.66e-01 100.0% 89.6%
1x51A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 49.0 4.04e-01 100.0% 92.3%
2ii7H00 2.60.290.11 Mainly Beta › Sandwich › Hypothetical Protein Tm1070; Chain: A › TM1070-like 0.55 38.0 3.41e-01 90.1% 49.1%
3holA01 2.40.128.250 Mainly Beta › Beta Barrel › Lipocalin › 0.55 44.0 4.22e-01 90.1% 95.2%
1xe0C00 2.60.120.340 Mainly Beta › Sandwich › Jelly Rolls › Nucleoplasmin core domain 0.53 36.0 3.27e-01 90.1% 49.5%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.53 41.0 3.30e-01 90.1% 90.0%
2x41A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.65e-01 94.4% 61.3%
5kfzA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.51 39.0 3.42e-01 90.1% 51.2%
2hdeA01 3.10.20.550 Alpha Beta › Roll › Ubiquitin-like (UB roll) › ASAP complex, SAP18 subunit 0.51 43.0 3.71e-01 100.0% 62.6%
5c86A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.77e-01 100.0% 66.3%
2yrbA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 39.0 3.32e-01 88.7% 97.8%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4084879 3115.1.1.1 ↗ a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A 0.60 46.0 4.38e-01 90.1% 69.4%
3824339 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 40.0 3.18e-01 90.1% 35.8%
3810292 3792.1.1.2 ↗ beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd 0.54 37.0 3.67e-01 100.0% 68.0%
4998579 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.18e-01 90.1% 49.2%
3252771 821.1.1.0 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease 0.53 38.0 3.67e-01 90.1% 64.7%
1562396 11.1.1.122 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GO-like_E_set 0.51 41.0 3.77e-01 100.0% 66.7%
4982909 871.1.1.1 ↗ a+b two layers › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › SSo0622-like (Pfam 02676) › TYW3 0.51 37.0 2.81e-01 80.3% 55.0%
318718 221.1.1.30 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › SAP18 0.50 42.0 3.40e-01 97.2% 72.3%
4032883 1.1.13.3 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_H_T_join 0.50 42.0 3.81e-01 100.0% 98.1%
D3 medium residues 160-191
PDB