←Back to structures

MF063068.1__ARV77411.1__NOXIFER_246__00242

Bact-Vir

MF063068.1__ARV77411.1__NOXIFER_246__00242

Identity

Accession:
MF063068 ↗
Kingdom:
phage

Quality

73.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Noxifervirus› Pseudomonas_phage_Noxifer

TaxID: 2006684

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-113
PDB
Domain cluster: rep: S2_012_000_R2_scaffold_0_prodigal-single.1__X__X__00670__D5-100
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ou8A00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.87 79.0 7.91e-01 96.2% 94.3%
2nysA00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.75 68.0 6.59e-01 97.2% 89.7%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.64 40.0 4.76e-01 83.0% 98.5%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.63 41.0 4.27e-01 83.0% 72.6%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 35.0 4.22e-01 77.4% 95.0%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 25.0 3.11e-01 91.5% 58.0%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 37.0 4.43e-01 100.0% 100.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 37.0 4.18e-01 78.3% 86.7%
2i8dA01 3.90.1150.200 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.56 28.0 3.16e-01 99.1% 60.5%
3e8vA00 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.56 36.0 3.98e-01 94.3% 84.1%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
605 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.87 79.0 7.91e-01 96.2% 94.3%
165392 4.1.2.1 ↗ beta barrels › SH3 › SH3 › Stringent starvation protein B, SspB › SspB 0.75 69.0 6.66e-01 100.0% 89.2%
4559371 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 42.0 5.28e-01 82.1% 98.4%
3485965 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 41.0 5.16e-01 88.7% 98.3%
4282868 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.71 45.0 5.36e-01 83.0% 95.7%
3302818 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.71 38.0 5.01e-01 87.7% 100.0%
4079197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 41.0 4.52e-01 81.1% 71.8%
4335951 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.70 44.0 5.23e-01 82.1% 93.2%
3281945 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 47.0 5.01e-01 84.0% 81.1%
4270910 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 44.0 5.19e-01 83.0% 95.7%
4168737 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 44.0 5.09e-01 83.0% 91.9%
4141828 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 44.0 5.11e-01 84.0% 93.2%
4973804 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 35.0 4.01e-01 74.5% 74.7%
3942998 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.61 36.0 4.29e-01 73.6% 88.6%
3684646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 39.0 4.32e-01 90.6% 85.0%
6336 331.13.1.1 ↗ a+b two layers › TBP-like › YwmB-like › YwmB-like › DUF1779 0.60 34.0 2.75e-01 99.1% 29.3%
5061515 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 39.0 3.96e-01 74.5% 82.9%
3497738 220.1.1.22 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.54 34.0 3.22e-01 75.5% 51.5%
3656401 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 36.0 4.07e-01 89.6% 96.0%
3200646 220.1.1.201 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7493 0.53 38.0 3.83e-01 74.5% 81.9%
3588663 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.52 37.0 3.86e-01 73.6% 100.0%
3475799 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.50 35.0 3.35e-01 72.6% 80.8%