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MF063068.1__ARV77446.1__NOXIFER_281__00277

Bact-Vir

MF063068.1__ARV77446.1__NOXIFER_281__00277

Identity

Accession:
MF063068 ↗
Kingdom:
phage

Quality

91.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-210
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14519.12 best Macro_2 27.3 3.10e-06 81.0% 32.4%
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dx6A00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.89 59.0 6.72e-01 76.6% 86.7%
3ejgA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.84 59.0 6.54e-01 89.3% 87.3%
5fszA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.84 59.0 5.50e-01 81.0% 59.2%
1yd9B00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.83 62.0 6.56e-01 90.2% 84.0%
3ejfA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.82 58.0 6.46e-01 89.3% 88.0%
2acfB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.82 58.0 6.36e-01 89.3% 85.0%
1njrA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.80 77.0 7.10e-01 100.0% 94.8%
4iqyB00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.78 61.0 5.93e-01 90.7% 74.4%
3q71A00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.77 62.0 6.27e-01 90.2% 83.7%
4umlA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.75 59.0 5.98e-01 89.8% 81.6%
4d86A01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.72 64.0 6.66e-01 99.0% 99.5%
5kivA01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.70 61.0 6.40e-01 99.0% 97.9%
3bbyA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.66 22.0 3.97e-01 89.8% 96.9%
1u0tB01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.62 32.0 3.83e-01 89.3% 71.9%
2kpoA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 33.0 4.28e-01 90.7% 94.5%
3nbmA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 32.0 4.22e-01 88.8% 96.2%
4njmA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 36.0 4.42e-01 90.7% 89.8%
2bonA01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.59 34.0 4.20e-01 89.3% 89.1%
3fbtA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.58 39.0 4.53e-01 100.0% 96.4%
3gybA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.58 35.0 4.32e-01 100.0% 95.9%
7q1bA01 3.40.800.20 Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain 0.58 53.0 4.39e-01 100.0% 100.0%
3cs3A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 35.0 4.25e-01 100.0% 95.3%
3eeqA01 3.40.50.11220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 32.0 3.97e-01 88.8% 90.0%
3ksmA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 33.0 4.15e-01 90.2% 93.7%
3l49A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 35.0 4.30e-01 100.0% 98.4%
3tb6A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.56 36.0 4.33e-01 99.0% 96.4%
1e9fA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 33.0 3.42e-01 89.8% 58.4%
2bzlA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.56 49.0 4.45e-01 96.6% 83.5%
2qu7A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 34.0 4.24e-01 100.0% 97.7%
1ba2A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 33.0 4.20e-01 98.5% 98.4%
4irxA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 34.0 4.09e-01 98.5% 92.5%
4y9tA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.55 35.0 4.11e-01 99.0% 90.3%
4hz2A01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.55 23.0 3.64e-01 94.6% 100.0%
3jvdB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 32.0 4.05e-01 100.0% 98.4%
3egcA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.54 34.0 4.12e-01 100.0% 97.7%
2yfkA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.54 36.0 3.76e-01 82.4% 73.0%
4ry9A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 35.0 4.12e-01 100.0% 97.0%
3fxaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.53 35.0 3.63e-01 91.2% 69.6%
3o1iC01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 35.0 4.14e-01 100.0% 97.8%
1abeA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 35.0 4.16e-01 100.0% 98.6%
2d1cA01 3.40.718.10 Alpha Beta › 3-Layer(aba) Sandwich › Isopropylmalate Dehydrogenase › Isopropylmalate Dehydrogenase 0.53 48.0 3.94e-01 100.0% 85.4%
4ry8A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 36.0 4.12e-01 92.7% 95.9%
4c6sA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.52 35.0 4.09e-01 90.2% 98.6%
7wmzC01 3.20.20.220 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › 0.52 43.0 3.87e-01 88.3% 100.0%
4bjhB01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.51 32.0 3.67e-01 81.0% 85.0%
2m6rA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.51 36.0 4.14e-01 89.8% 98.7%
2i2xB02 3.40.50.280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain 0.51 33.0 3.98e-01 99.0% 97.8%
7bsqA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.51 39.0 3.86e-01 79.5% 94.0%
4ywhA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 34.0 3.99e-01 100.0% 97.2%
4impA02 3.40.50.11460 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 37.0 3.68e-01 83.4% 73.0%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3975782 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.93 87.0 8.22e-01 100.0% 83.4%
3955833 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.89 61.0 6.73e-01 78.0% 83.5%
4311414 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.88 61.0 6.69e-01 77.6% 84.7%
3200212 7529.1.1.0 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like 0.87 84.0 7.82e-01 100.0% 97.1%
5049732 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.87 61.0 6.66e-01 78.5% 84.0%
3977898 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.86 61.0 6.62e-01 79.0% 84.0%
4947078 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.86 61.0 6.52e-01 82.0% 82.2%
3254438 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.84 63.0 6.31e-01 85.4% 75.6%
3783427 7529.1.1.7 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro_2 0.83 79.0 6.86e-01 100.0% 98.0%
4864750 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.83 61.0 6.61e-01 77.6% 87.1%
4837846 7529.1.1.0 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like 0.82 58.0 6.32e-01 89.3% 85.0%
10500 7529.1.1.7 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro_2 0.80 77.0 7.10e-01 100.0% 94.8%
3649940 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.78 62.0 6.14e-01 88.3% 78.6%
4995471 7529.1.1.0 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like 0.77 54.0 5.85e-01 77.1% 84.1%
4025522 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.77 61.0 5.74e-01 82.4% 79.2%
4615915 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.77 63.0 6.60e-01 97.1% 91.5%
3735302 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.73 60.0 5.91e-01 90.7% 80.0%
3872863 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.72 60.0 5.61e-01 90.7% 71.8%
3563715 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.71 64.0 6.42e-01 99.0% 92.7%
3784324 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.71 64.0 5.71e-01 99.0% 69.8%
3840476 7529.1.1.1 a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › Macro 0.69 64.0 6.34e-01 95.1% 93.8%
3943294 2007.2.2.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.64 31.0 4.34e-01 89.8% 96.8%
4955726 2498.2.1.0 mixed a+b and a/b › Zincin-like › beta-N-acetylhexosaminidase-like domain › beta-N-acetylhexosaminidase-like domain 0.63 37.0 4.61e-01 90.2% 95.8%
4121473 2488.1.1.5 a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase 0.62 40.0 4.82e-01 91.2% 98.5%
3947396 2007.2.2.2 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Phosphotyrosine protein phosphatases I-like › PTS_IIB 0.61 30.0 4.13e-01 90.2% 96.8%
4989706 2007.23.1.1 a/b three-layered sandwiches › Flavodoxin-like › CbiG N-terminal domain-like › CbiG N-terminal domain-like › CbiG_N 0.61 33.0 4.26e-01 98.5% 92.2%
3703801 2485.1.1.13 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N 0.61 32.0 4.12e-01 100.0% 86.7%
4188863 2007.1.4.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Phosphofructokinase N-terminal domain › NAD_kinase 0.60 31.0 4.15e-01 89.3% 95.2%
4144952 2485.1.1.39 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_2 0.58 32.0 3.21e-01 100.0% 49.1%
4025073 2006.1.5.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.58 49.0 4.04e-01 91.2% 87.6%
5008415 2006.1.5.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.57 52.0 4.35e-01 99.5% 89.7%
4032252 2006.1.5.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.57 52.0 4.25e-01 100.0% 90.6%
3284408 2006.1.5.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl 0.57 52.0 4.17e-01 99.5% 87.0%
3704251 7568.1.1.0 a/b three-layered sandwiches › BRCT domain › BRCT domain › BRCT domain 0.56 26.0 3.71e-01 90.7% 92.0%
4996768 2007.1.3.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg 0.54 35.0 4.11e-01 72.7% 92.9%
4357085 2007.1.16.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn 0.54 29.0 3.46e-01 89.3% 75.0%
3366869 2007.1.16.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn 0.53 31.0 3.63e-01 91.7% 80.7%
4952892 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.53 36.0 4.12e-01 99.0% 94.0%
3170061 2007.1.16.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Iron-sulphur enzyme Dph2 › Diphthamide_syn 0.52 32.0 3.48e-01 91.2% 69.7%
3175891 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.52 33.0 4.03e-01 90.2% 99.2%
3973745 2002.3.1.0 a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase 0.52 44.0 3.95e-01 90.7% 90.3%
4248044 2003.1.1.120 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA 0.51 39.0 4.21e-01 99.0% 92.0%
4667495 2003.1.6.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin 0.51 39.0 3.80e-01 78.0% 92.9%
4286297 2003.1.1.120 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA 0.51 38.0 4.07e-01 99.0% 87.8%
5031407 2007.1.3.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding 0.51 35.0 3.76e-01 100.0% 80.6%
4946113 2007.2.1.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins 0.51 35.0 4.02e-01 89.8% 95.3%
3443243 2007.1.3.28 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Glyco_transf_61 0.51 37.0 3.49e-01 73.2% 71.0%
5060442 2007.2.1.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_1 0.51 35.0 3.99e-01 90.2% 97.9%
5001412 2007.1.1.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like 0.50 43.0 3.97e-01 89.3% 99.6%
5050954 2007.1.1.1 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase 0.50 36.0 3.47e-01 73.2% 95.0%