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MF063068.1__ARV77473.1__NOXIFER_308__00304

Bact-Vir

MF063068.1__ARV77473.1__NOXIFER_308__00304

Identity

Accession:
MF063068 ↗
Kingdom:
phage

Quality

72.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Noxifervirus› Pseudomonas_phage_Noxifer

TaxID: 2006684

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 149-240
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3n40P04 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.69 49.0 5.40e-01 92.4% 94.5%
3muuB02 2.60.40.2400 Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C 0.67 48.0 5.24e-01 92.4% 94.5%
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 48.0 5.14e-01 92.4% 97.5%
4nn5C01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 47.0 4.87e-01 89.1% 88.1%
1hnfA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 45.0 4.78e-01 91.3% 88.6%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.61 52.0 4.81e-01 92.4% 95.7%
3s7iB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 51.0 4.11e-01 93.5% 87.6%
1cauA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 51.0 4.13e-01 93.5% 92.3%
1ti2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 43.0 4.46e-01 80.4% 79.8%
4gqzA00 2.60.40.3700 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 48.0 3.96e-01 84.8% 66.7%
4lejA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 50.0 4.07e-01 93.5% 93.8%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.59 52.0 4.80e-01 100.0% 94.3%
4lsdF00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 4.96e-01 92.4% 88.8%
4a2lB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 4.55e-01 92.4% 91.1%
1lkfA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.59 52.0 3.69e-01 100.0% 84.9%
3v9fA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 50.0 4.55e-01 92.4% 89.3%
6b9tF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 42.0 4.01e-01 93.5% 63.3%
7y8sB03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 47.0 4.93e-01 89.1% 96.4%
5irbA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 48.0 4.62e-01 92.4% 92.3%
4yrdA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 45.0 4.17e-01 88.0% 97.5%
1x5aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 47.0 4.74e-01 92.4% 93.4%
2v72A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 45.0 3.97e-01 88.0% 96.4%
1m4kA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 46.0 4.52e-01 93.5% 93.9%
1o59A02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 44.0 3.94e-01 89.1% 96.4%
6b9tF01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 42.0 3.89e-01 83.7% 90.4%
1cwvA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.70e-01 92.4% 94.6%
2vzsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 47.0 4.44e-01 92.4% 94.5%
2vsdA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 45.0 4.53e-01 91.3% 93.5%
2w91A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 46.0 4.44e-01 92.4% 87.4%
2lgnA00 2.60.40.2850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 38.0 4.31e-01 81.5% 100.0%
7vqmA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 4.48e-01 91.3% 92.5%
5eiqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 4.49e-01 92.4% 95.6%
5d2lE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 4.27e-01 91.3% 95.4%
1f6fB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 45.0 4.45e-01 92.4% 94.8%
1s3rA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.54 27.0 3.37e-01 71.7% 81.1%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 40.0 3.74e-01 96.7% 61.7%
1te5A00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.54 40.0 2.98e-01 80.4% 31.2%
6rpxA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 4.53e-01 90.2% 98.8%
4pbxA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 44.0 4.45e-01 92.4% 92.4%
4i0nA00 2.70.240.10 Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA 0.53 44.0 3.24e-01 93.5% 68.2%
1aq3A00 3.30.380.10 Alpha Beta › 2-Layer Sandwich › MS2 Viral Coat Protein › MS2 Viral Coat Protein 0.52 36.0 3.22e-01 79.3% 50.4%
6l4cA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.52 44.0 3.54e-01 94.6% 59.2%
3utoB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 4.13e-01 92.4% 87.0%
3ecyA00 2.70.40.10 Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) 0.50 42.0 3.91e-01 93.5% 80.7%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4954979 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 49.0 5.29e-01 98.9% 92.0%
5006626 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 48.0 5.19e-01 91.3% 92.0%
3179194 12.6.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related 0.66 50.0 5.35e-01 82.6% 93.8%
3913597 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 56.0 5.60e-01 92.4% 91.6%
2321850 11.1.1.245 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_6 0.65 51.0 5.47e-01 92.4% 95.1%
5055560 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 51.0 5.32e-01 91.3% 91.8%
5028344 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 50.0 5.20e-01 95.7% 90.6%
3606277 210.2.1.0 ↗ a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.63 56.0 4.71e-01 100.0% 96.2%
5030338 11.1.1.1410 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CarboxypepD_reg 0.63 51.0 5.31e-01 92.4% 95.3%
4234627 11.1.1.32 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Desulfoferrodox 0.61 52.0 5.36e-01 93.5% 98.8%
5027062 11.1.1.246 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_7 0.61 50.0 5.12e-01 90.2% 93.3%
4932697 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 41.0 4.75e-01 81.5% 100.0%
3502137 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 51.0 4.55e-01 92.4% 88.5%
5036972 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 44.0 4.34e-01 87.0% 72.0%
3190573 706.2.1.0 ↗ beta complex topology › Head domain of nucleotide exchange factor GrpE › G5 and E repeats in surface protein G › G5 and E repeats in surface protein G 0.59 35.0 4.16e-01 71.7% 96.4%
5056538 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.59 46.0 4.35e-01 91.3% 70.0%
4955334 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 46.0 4.72e-01 92.4% 91.8%
3196759 11.1.1.963 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_71 0.59 49.0 4.51e-01 94.6% 84.0%
3783150 11.1.1.871 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26282 0.58 48.0 4.06e-01 90.2% 90.3%
3849830 11.1.1.871 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26282 0.58 49.0 4.33e-01 92.4% 85.2%
3184594 11.1.1.871 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26282 0.58 49.0 4.13e-01 94.6% 90.6%
3069712 2.4.1.13 ↗ beta barrels › OB-fold › MOP-like › MOP-like › DUF7407 0.58 41.0 4.63e-01 82.6% 98.6%
4388029 11.1.1.963 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Glyco_hydro_71 0.58 47.0 4.44e-01 91.3% 80.9%
5076111 11.1.4.23 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.57 40.0 4.08e-01 80.4% 74.4%
3392479 11.1.1.871 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26282 0.57 48.0 4.21e-01 92.4% 88.6%
3727754 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 48.0 4.54e-01 93.5% 87.3%
4029592 5090.1.1.7 ↗ beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains › HAP2-GCS1 0.57 48.0 3.07e-01 92.4% 100.0%
5038683 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 46.0 4.74e-01 91.3% 93.3%
5030329 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 45.0 4.64e-01 94.6% 91.8%
3894313 11.1.5.116 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PF26282 0.57 48.0 4.41e-01 92.4% 97.5%
5073924 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 45.0 4.69e-01 95.7% 94.1%
3222721 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 48.0 4.26e-01 94.6% 85.9%
4941013 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 43.0 4.33e-01 91.3% 85.6%
168501 11.1.1.178 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.55 45.0 4.53e-01 91.3% 93.5%
3769454 11.1.1.178 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.55 44.0 4.44e-01 90.2% 91.6%
5002376 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 30.0 2.88e-01 78.3% 42.9%
3226630 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.54 46.0 3.89e-01 95.7% 76.9%
3846431 11.1.1.178 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 0.54 44.0 4.34e-01 92.4% 89.0%
3166528 109.4.1.1246 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Ig_TRAPPC9-Trs120_3rd 0.54 44.0 3.67e-01 93.5% 91.4%
3712329 3333.1.1.0 ↗ a+b two layers › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 › Barrel domain in dedicator of cytokinesis protein 9 0.52 41.0 3.18e-01 82.6% 41.0%
5081728 3172.1.1.0 ↗ a+b two layers › Uncharacterized protein gp49 › Uncharacterized protein gp49 › Uncharacterized protein gp49 0.51 33.0 3.73e-01 100.0% 92.3%
3243464 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 42.0 3.72e-01 94.6% 87.1%