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MF098558.1__ASV44009.1__X__00077

Bact-Vir

MF098558.1__ASV44009.1__X__00077

Identity

Accession:
MF098558 ↗
Kingdom:
phage

Quality

60.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 34-85
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13986.12 best DUF4224 31.3 2.20e-07 86.5% 100.0%
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4y4mC00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.70 50.0 3.21e-01 98.1% 15.7%
1earA02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.69 52.0 4.68e-01 88.5% 59.4%
2q4aA00 3.60.130.10 Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like 0.69 62.0 3.77e-01 100.0% 29.0%
2gaxA00 3.40.1490.10 Alpha Beta › 3-Layer(aba) Sandwich › Bit1 › Bit1 0.62 50.0 3.69e-01 88.5% 85.8%
4n06A02 1.20.120.920 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain 0.62 50.0 3.26e-01 96.2% 63.6%
1b96A00 3.40.600.10 Alpha Beta › 3-Layer(aba) Sandwich › ECO RV Endonuclease; Chain A › DNA mismatch repair MutH/Restriction endonuclease, type II 0.61 42.0 2.70e-01 71.2% 51.6%
2cw8A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 47.0 3.27e-01 88.5% 26.6%
3zx4A02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.60 41.0 3.48e-01 84.6% 41.4%
3hwcA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.59 41.0 2.78e-01 73.1% 44.3%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 3.95e-01 82.7% 65.3%
2xfvA00 3.10.260.30 Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › 0.59 46.0 3.74e-01 90.4% 58.3%
1z6tA04 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 45.0 3.97e-01 90.4% 56.5%
3to8A02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.59 47.0 3.87e-01 90.4% 58.3%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 45.0 4.01e-01 90.4% 58.4%
3gp4B00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.58 46.0 3.65e-01 100.0% 55.4%
3slhA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.57 46.0 3.16e-01 92.3% 34.3%
2zhgA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.57 46.0 3.73e-01 100.0% 57.0%
2i0zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 44.0 2.89e-01 90.4% 26.2%
5d8cA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.57 45.0 3.63e-01 100.0% 57.1%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.16e-01 98.1% 73.0%
1vx7X00 3.30.1360.210 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.57 40.0 3.33e-01 75.0% 94.8%
4n3pA02 3.65.10.10 Alpha Beta › Alpha-beta prism › UDP-n-acetylglucosamine1-carboxyvinyl-transferase; Chain › Enolpyruvate transferase domain 0.55 45.0 3.09e-01 96.2% 32.4%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 39.0 3.67e-01 75.0% 67.2%
1a9xA07 3.30.1490.20 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain 0.55 38.0 3.76e-01 73.1% 90.9%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 42.0 4.05e-01 90.4% 71.9%
3gpvA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.55 43.0 3.60e-01 100.0% 65.5%
3hh0A01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.54 43.0 4.03e-01 100.0% 98.6%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 44.0 3.85e-01 98.1% 58.6%
3ucsA00 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.54 43.0 3.67e-01 98.1% 72.7%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 41.0 3.66e-01 90.4% 60.7%
6jgwA01 1.10.1660.10 Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › 0.54 41.0 3.36e-01 94.2% 57.0%
2ntxA01 1.20.58.2010 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 1 0.54 37.0 2.50e-01 71.2% 72.4%
3ecoB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 40.0 3.04e-01 92.3% 32.6%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 37.0 3.57e-01 75.0% 66.7%
1lg7A00 3.10.460.10 Alpha Beta › Roll › VSV matrix protein › VSV matrix protein 0.53 42.0 3.17e-01 100.0% 98.2%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 3.07e-01 92.3% 32.8%
3qphA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.54e-01 100.0% 52.6%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.57e-01 98.1% 56.2%
2l02A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.54e-01 92.3% 56.1%
6az6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.71e-01 100.0% 65.3%
7ewfB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 42.0 3.81e-01 96.2% 70.7%
2a61B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 41.0 3.09e-01 98.1% 33.6%
3szpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.39e-01 88.5% 59.6%
4a6dA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.41e-01 92.3% 53.2%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 41.0 3.80e-01 100.0% 73.3%
2dk8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 39.0 3.70e-01 90.4% 69.2%
2mkhA02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 40.0 3.37e-01 92.3% 58.8%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 38.0 3.42e-01 100.0% 54.4%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 40.0 3.72e-01 92.3% 75.4%
6p2uA02 3.30.30.30 Alpha Beta › 2-Layer Sandwich › Defensin A-like › 0.50 36.0 3.62e-01 75.0% 75.0%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3667928 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 51.0 4.96e-01 90.4% 96.7%
3584499 101.1.2.122 alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.65 48.0 4.28e-01 88.5% 55.1%
3620006 109.4.1.142 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CSN8_PSD8_EIF3K 0.64 48.0 3.10e-01 88.5% 16.9%
3799483 101.1.2.122 alpha arrays › HTH › HTH › winged helix domain › CSN8_PSD8_EIF3K 0.64 48.0 4.94e-01 90.4% 88.0%
5082561 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.64 50.0 5.10e-01 92.3% 94.0%
4995013 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.64 50.0 4.31e-01 90.4% 54.8%
3954861 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.62 47.0 4.70e-01 90.4% 87.3%
4932995 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.61 48.0 4.88e-01 90.4% 94.0%
3943951 101.1.9.45 alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA 0.61 47.0 4.51e-01 90.4% 73.8%
5047649 101.1.9.36 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR 0.60 47.0 4.81e-01 90.4% 94.0%
2773193 2002.1.1.173 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GH123_cat 0.58 41.0 2.41e-01 73.1% 19.0%
3739748 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.58 40.0 3.48e-01 75.0% 49.4%
4668740 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.58 44.0 3.70e-01 92.3% 45.7%
3289439 101.1.9.16 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 0.58 44.0 4.36e-01 92.3% 85.5%
4223228 101.1.9.21 alpha arrays › HTH › HTH › Putative DNA-binding domain › Swi6_N 0.57 44.0 3.78e-01 88.5% 64.4%
3980161 101.1.9.45 alpha arrays › HTH › HTH › Putative DNA-binding domain › Phage_AlpA 0.56 43.0 4.30e-01 92.3% 87.3%
3941467 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.56 46.0 4.12e-01 100.0% 87.5%
5027627 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.56 45.0 4.49e-01 98.1% 90.9%
4940483 101.1.2.650 alpha arrays › HTH › HTH › winged helix domain › DUF7343 0.56 43.0 3.78e-01 90.4% 56.5%
4988740 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.56 43.0 3.70e-01 92.3% 51.6%
4197446 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.55 44.0 3.51e-01 100.0% 54.1%
3387245 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.55 45.0 3.51e-01 100.0% 54.8%
3710117 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 42.0 3.60e-01 92.3% 50.0%
5077394 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.55 41.0 3.25e-01 98.1% 36.5%
3512662 101.1.2.183 alpha arrays › HTH › HTH › winged helix domain › MUS81-like_WH 0.55 43.0 3.55e-01 92.3% 59.0%
171609 101.1.9.17 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 0.54 43.0 3.42e-01 100.0% 53.4%
3580147 109.4.1.1505 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_FBXO47 0.54 38.0 2.33e-01 75.0% 26.0%
4079854 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.54 40.0 3.77e-01 90.4% 64.0%
4985160 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 3.56e-01 98.1% 48.6%
3284986 101.1.9.82 alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 0.53 44.0 3.45e-01 98.1% 55.8%
3896410 2007.1.2.4 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.53 44.0 2.60e-01 100.0% 81.0%
4940693 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 3.32e-01 92.3% 45.0%
5033726 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.52 39.0 3.38e-01 98.1% 47.0%
3988425 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.52 42.0 3.70e-01 92.3% 67.5%
4030126 101.1.2.18 alpha arrays › HTH › HTH › winged helix domain › Ribosomal_S19e 0.52 37.0 2.61e-01 75.0% 66.9%
3994831 5076.1.1.1 alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.52 38.0 2.39e-01 78.8% 68.8%
4056199 7516.1.1.10 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › CofC 0.52 39.0 2.56e-01 80.8% 45.3%
3545977 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.52 42.0 3.87e-01 92.3% 94.3%
4964723 108.4.1.4 alpha arrays › EF-hand › Hypothetical protein MTH865 › Hypothetical protein MTH865 › DUF5785 0.51 36.0 3.44e-01 75.0% 95.2%
3707832 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.33e-01 92.3% 57.0%
3819311 101.1.2.516 alpha arrays › HTH › HTH › winged helix domain › PF25895 0.51 39.0 3.10e-01 90.4% 60.8%
5040253 101.1.2.673 alpha arrays › HTH › HTH › winged helix domain › HTH_HVO_0163_N 0.51 39.0 3.43e-01 92.3% 54.4%
4968723 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 38.0 3.13e-01 92.3% 40.8%
5009323 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 38.0 2.86e-01 88.5% 56.5%
4966804 101.1.2.530 alpha arrays › HTH › HTH › winged helix domain › HVO_A0114 0.50 40.0 3.58e-01 98.1% 60.0%
3892456 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.50 35.0 2.86e-01 75.0% 52.7%
3177309 101.1.2.7 alpha arrays › HTH › HTH › winged helix domain › HSF_DNA-bind 0.50 42.0 3.59e-01 98.1% 66.7%
5053414 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.50 40.0 3.14e-01 98.1% 36.9%
4941847 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.50 38.0 3.28e-01 98.1% 49.5%
4986964 101.1.2.46 alpha arrays › HTH › HTH › winged helix domain › HrcA_DNA-bdg 0.50 38.0 3.38e-01 90.4% 57.6%
3552191 109.4.1.223 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Aquarius_N_1st 0.50 39.0 2.37e-01 88.5% 31.6%